Gene annotation
Transcriptome id Sobic.004G206401.1
Synonym -
Functional annotation -
UniProt A0A1Z5RND3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G241000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@3 Ketoacyl CoA synthetase 11 KCS11 (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.004G043001 - -
4 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
5 Sobic.003G105800 No apical meristem protein, putative, expressed -
6 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9
8 Sobic.010G182500 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
9 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
10 Sobic.002G266200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
12 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
13 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
14 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.001G182500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
17 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
18 Sobic.006G132600 - -
19 Sobic.003G388251 - K01166: ribonuclease T2
20 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -


Gene co-expression network
sample Sobic004G206401 Sobic004G206401 Sobic009G241000 Sobic009G241000 Sobic004G206401--Sobic009G241000 Sobic001G274800 Sobic001G274800 Sobic004G206401--Sobic001G274800 Sobic004G043001 Sobic004G043001 Sobic004G206401--Sobic004G043001 Sobic003G184900 Sobic003G184900 Sobic004G206401--Sobic003G184900 Sobic003G105800 Sobic003G105800 Sobic004G206401--Sobic003G105800 Sobic008G079300 Sobic008G079300 Sobic004G206401--Sobic008G079300 Sobic002G265300 Sobic002G265300 Sobic004G206401--Sobic002G265300 Sobic010G182500 Sobic010G182500 Sobic004G206401--Sobic010G182500 Sobic007G186200 Sobic007G186200 Sobic004G206401--Sobic007G186200 Sobic009G241000--Sobic004G206401 Sobic009G241000--Sobic002G265300 Sobic004G198800 Sobic004G198800 Sobic009G241000--Sobic004G198800 Sobic003G377000 Sobic003G377000 Sobic009G241000--Sobic003G377000 Sobic002G139600 Sobic002G139600 Sobic009G241000--Sobic002G139600 Sobic002G431000 Sobic002G431000 Sobic009G241000--Sobic002G431000 Sobic001G512800 Sobic001G512800 Sobic009G241000--Sobic001G512800 Sobic009G241000--Sobic001G274800 Sobic004G096700 Sobic004G096700 Sobic009G241000--Sobic004G096700 Sobic001G274800--Sobic003G184900 Sobic006G100332 Sobic006G100332 Sobic001G274800--Sobic006G100332 Sobic004G321800 Sobic004G321800 Sobic001G274800--Sobic004G321800 Sobic002G324000 Sobic002G324000 Sobic001G274800--Sobic002G324000 Sobic001G274800--Sobic004G206401 Sobic001G274800--Sobic003G105800 Sobic007G068100 Sobic007G068100 Sobic001G274800--Sobic007G068100 Sobic001G274800--Sobic007G186200 Sobic001G182500 Sobic001G182500 Sobic001G274800--Sobic001G182500 Sobic004G043001--Sobic004G206401 Sobic006G138800 Sobic006G138800 Sobic004G043001--Sobic006G138800 Sobic003G304200 Sobic003G304200 Sobic004G043001--Sobic003G304200 Sobic003G005600 Sobic003G005600 Sobic004G043001--Sobic003G005600 Sobic004G043001--Sobic001G274800 Sobic008G131400 Sobic008G131400 Sobic004G043001--Sobic008G131400 Sobic004G242500 Sobic004G242500 Sobic004G043001--Sobic004G242500 Sobic004G043001--Sobic010G182500 Sobic004G043001--Sobic007G186200 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic003G184900--Sobic006G100332 Sobic007G225900 Sobic007G225900 Sobic003G184900--Sobic007G225900 Sobic003G184900--Sobic002G324000 Sobic003G087200 Sobic003G087200 Sobic003G184900--Sobic003G087200 Sobic005G178100 Sobic005G178100 Sobic003G184900--Sobic005G178100 Sobic003G184900--Sobic001G182500 Sobic003G105800--Sobic003G184900 Sobic003G105800--Sobic008G079300 Sobic003G105800--Sobic004G321800 Sobic001G325200 Sobic001G325200 Sobic003G105800--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G105800--Sobic002G304000 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic009G226300 Sobic009G226300 Sobic003G105800--Sobic009G226300 Sobic008G079300--Sobic003G184900 Sobic008G079300--Sobic003G105800 Sobic008G079300--Sobic007G225900 Sobic008G079300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic008G079300--Sobic009G207600 Sobic008G079300--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic008G079300--Sobic009G034700 Sobic001G474500 Sobic001G474500 Sobic008G079300--Sobic001G474500 Sobic008G079300--Sobic001G325200 Sobic002G265300--Sobic003G377000 Sobic002G007800 Sobic002G007800 Sobic002G265300--Sobic002G007800 Sobic002G265300--Sobic004G096700 Sobic002G265300--Sobic002G431000 Sobic002G426300 Sobic002G426300 Sobic002G265300--Sobic002G426300 Sobic010G171000 Sobic010G171000 Sobic002G265300--Sobic010G171000 Sobic002G265300--Sobic009G241000 Sobic010G184300 Sobic010G184300 Sobic002G265300--Sobic010G184300 Sobic009G025200 Sobic009G025200 Sobic002G265300--Sobic009G025200 Sobic010G182500--Sobic009G226300 Sobic007G187300 Sobic007G187300 Sobic010G182500--Sobic007G187300 Sobic009G054500 Sobic009G054500 Sobic010G182500--Sobic009G054500 Sobic001G249300 Sobic001G249300 Sobic010G182500--Sobic001G249300 Sobic005G018500 Sobic005G018500 Sobic010G182500--Sobic005G018500 Sobic010G182500--Sobic006G100332 Sobic003G138200 Sobic003G138200 Sobic010G182500--Sobic003G138200 Sobic003G259200 Sobic003G259200 Sobic010G182500--Sobic003G259200 Sobic004G260000 Sobic004G260000 Sobic010G182500--Sobic004G260000 Sobic007G186200--Sobic001G325200 Sobic007G186200--Sobic002G304000 Sobic007G186200--Sobic009G226300 Sobic001G015500 Sobic001G015500 Sobic007G186200--Sobic001G015500 Sobic007G186200--Sobic007G068100 Sobic003G355600 Sobic003G355600 Sobic007G186200--Sobic003G355600 Sobic001G150600 Sobic001G150600 Sobic007G186200--Sobic001G150600 Sobic004G101900 Sobic004G101900 Sobic007G186200--Sobic004G101900 Sobic007G186200--Sobic009G054500
Octagon: transcription factors


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