Gene annotation
Transcriptome id Sobic.002G266200.1
Synonym Sb02g030080
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QDM2
Pfam -
Panther DB PTHR31949 PTHR31949:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40070 : -
RAP-DB (Rice) LOC_Os09g34290.1 : transposon protein, putative, CACTA, En/Spm sub-class, expressed
MaizeGDB (Corn) Zm00025a047665
Brachypodium KQJ91089
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G138200 expressed protein -
2 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
3 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -
4 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
5 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
6 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
7 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
10 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
12 Sobic.006G100332 - -
13 Sobic.010G248900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.003G105800 No apical meristem protein, putative, expressed -
16 Sobic.006G030700 receptor kinase, putative, expressed -
17 Sobic.010G182500 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
18 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
20 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase


Gene co-expression network
sample Sobic002G266200 Sobic002G266200 Sobic003G138200 Sobic003G138200 Sobic002G266200--Sobic003G138200 Sobic001G249300 Sobic001G249300 Sobic002G266200--Sobic001G249300 Sobic001G150200 Sobic001G150200 Sobic002G266200--Sobic001G150200 Sobic002G215700 Sobic002G215700 Sobic002G266200--Sobic002G215700 Sobic009G054500 Sobic009G054500 Sobic002G266200--Sobic009G054500 Sobic007G186200 Sobic007G186200 Sobic002G266200--Sobic007G186200 Sobic007G187300 Sobic007G187300 Sobic002G266200--Sobic007G187300 Sobic009G226300 Sobic009G226300 Sobic002G266200--Sobic009G226300 Sobic001G512800 Sobic001G512800 Sobic002G266200--Sobic001G512800 Sobic003G138200--Sobic001G249300 Sobic003G138200--Sobic009G226300 Sobic003G138200--Sobic007G187300 Sobic003G138200--Sobic001G150200 Sobic003G138200--Sobic009G054500 Sobic009G211400 Sobic009G211400 Sobic003G138200--Sobic009G211400 Sobic003G138200--Sobic002G215700 Sobic004G260000 Sobic004G260000 Sobic003G138200--Sobic004G260000 Sobic001G325200 Sobic001G325200 Sobic003G138200--Sobic001G325200 Sobic001G280200 Sobic001G280200 Sobic001G249300--Sobic001G280200 Sobic001G249300--Sobic009G226300 Sobic001G249300--Sobic009G054500 Sobic001G249300--Sobic007G187300 Sobic001G249300--Sobic003G138200 Sobic006G030700 Sobic006G030700 Sobic001G249300--Sobic006G030700 Sobic004G255000 Sobic004G255000 Sobic001G249300--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic001G249300--Sobic003G259200 Sobic009G029600 Sobic009G029600 Sobic001G249300--Sobic009G029600 Sobic001G150200--Sobic003G138200 Sobic001G150200--Sobic009G226300 Sobic001G150200--Sobic001G249300 Sobic010G107000 Sobic010G107000 Sobic001G150200--Sobic010G107000 Sobic003G105800 Sobic003G105800 Sobic001G150200--Sobic003G105800 Sobic001G150200--Sobic004G260000 Sobic001G150200--Sobic001G325200 Sobic001G150200--Sobic009G054500 Sobic001G150200--Sobic009G211400 Sobic001G227800 Sobic001G227800 Sobic002G215700--Sobic001G227800 Sobic002G215700--Sobic009G054500 Sobic002G215700--Sobic009G226300 Sobic004G101900 Sobic004G101900 Sobic002G215700--Sobic004G101900 Sobic002G304000 Sobic002G304000 Sobic002G215700--Sobic002G304000 Sobic006G100332 Sobic006G100332 Sobic002G215700--Sobic006G100332 Sobic002G215700--Sobic003G138200 Sobic003G148800 Sobic003G148800 Sobic002G215700--Sobic003G148800 Sobic005G018500 Sobic005G018500 Sobic002G215700--Sobic005G018500 Sobic009G054500--Sobic009G226300 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic009G054500--Sobic004G260000 Sobic009G054500--Sobic003G148800 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic009G054500--Sobic006G100332 Sobic009G054500--Sobic002G215700 Sobic007G186200--Sobic001G325200 Sobic007G186200--Sobic002G304000 Sobic007G186200--Sobic009G226300 Sobic001G015500 Sobic001G015500 Sobic007G186200--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic007G186200--Sobic007G068100 Sobic003G355600 Sobic003G355600 Sobic007G186200--Sobic003G355600 Sobic001G150600 Sobic001G150600 Sobic007G186200--Sobic001G150600 Sobic007G186200--Sobic004G101900 Sobic007G186200--Sobic009G054500 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic007G187300--Sobic001G280200 Sobic007G187300--Sobic005G018500 Sobic007G187300--Sobic004G260000 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic001G512800--Sobic003G138200 Sobic002G322900 Sobic002G322900 Sobic001G512800--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic001G512800--Sobic010G206000 Sobic004G246200 Sobic004G246200 Sobic001G512800--Sobic004G246200 Sobic002G409500 Sobic002G409500 Sobic001G512800--Sobic002G409500 Sobic001G512800--Sobic009G029600 Sobic010G248900 Sobic010G248900 Sobic001G512800--Sobic010G248900 Sobic001G512800--Sobic009G054500 Sobic005G079900 Sobic005G079900 Sobic001G512800--Sobic005G079900
Octagon: transcription factors


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