Gene annotation
Transcriptome id Sobic.001G182500.1
Synonym
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5WU89
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF267
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G55050 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os03g38470.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK14339
Barley -
Wheat TraesCS5B02G102200 , TraesCS5A02G096300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
2 Sobic.006G100332 - -
3 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.004G050200 Strongly up-regulated in leaf samples inoculated with S. reilianum f. sp. zeae but not S. reilianum f. sp. reilianum(PubMedID : 22670753)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
5 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
6 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
7 Sobic.001G491800 expressed protein -
8 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.007G219900 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
10 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
12 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
13 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
14 Sobic.003G105800 No apical meristem protein, putative, expressed -
15 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
16 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
20 Sobic.003G138200 expressed protein -


Gene co-expression network
sample Sobic001G182500 Sobic001G182500 Sobic003G184900 Sobic003G184900 Sobic001G182500--Sobic003G184900 Sobic006G100332 Sobic006G100332 Sobic001G182500--Sobic006G100332 Sobic004G260000 Sobic004G260000 Sobic001G182500--Sobic004G260000 Sobic004G050200 Sobic004G050200 Sobic001G182500--Sobic004G050200 Sobic009G054500 Sobic009G054500 Sobic001G182500--Sobic009G054500 Sobic003G010600 Sobic003G010600 Sobic001G182500--Sobic003G010600 Sobic001G491800 Sobic001G491800 Sobic001G182500--Sobic001G491800 Sobic009G226300 Sobic009G226300 Sobic001G182500--Sobic009G226300 Sobic007G219900 Sobic007G219900 Sobic001G182500--Sobic007G219900 Sobic003G105800 Sobic003G105800 Sobic003G184900--Sobic003G105800 Sobic008G079300 Sobic008G079300 Sobic003G184900--Sobic008G079300 Sobic004G321800 Sobic004G321800 Sobic003G184900--Sobic004G321800 Sobic003G184900--Sobic006G100332 Sobic007G225900 Sobic007G225900 Sobic003G184900--Sobic007G225900 Sobic002G324000 Sobic002G324000 Sobic003G184900--Sobic002G324000 Sobic003G087200 Sobic003G087200 Sobic003G184900--Sobic003G087200 Sobic005G178100 Sobic005G178100 Sobic003G184900--Sobic005G178100 Sobic003G184900--Sobic001G182500 Sobic001G150600 Sobic001G150600 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic007G187300 Sobic007G187300 Sobic006G100332--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic006G100332--Sobic006G030700 Sobic001G249300 Sobic001G249300 Sobic006G100332--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic006G100332--Sobic003G148800 Sobic005G018500 Sobic005G018500 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G255000 Sobic004G255000 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic008G062200 Sobic008G062200 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic003G219600 Sobic003G219600 Sobic004G260000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic004G260000--Sobic009G211400 Sobic004G113300 Sobic004G113300 Sobic004G050200--Sobic004G113300 Sobic004G050200--Sobic001G182500 Sobic004G050200--Sobic003G184900 Sobic006G036900 Sobic006G036900 Sobic004G050200--Sobic006G036900 Sobic004G050200--Sobic002G324000 Sobic002G190500 Sobic002G190500 Sobic004G050200--Sobic002G190500 Sobic004G050200--Sobic001G491800 Sobic001G274800 Sobic001G274800 Sobic004G050200--Sobic001G274800 Sobic004G050200--Sobic008G079300 Sobic009G054500--Sobic009G226300 Sobic009G054500--Sobic005G018500 Sobic009G054500--Sobic001G249300 Sobic009G054500--Sobic004G260000 Sobic009G054500--Sobic003G148800 Sobic003G259200 Sobic003G259200 Sobic009G054500--Sobic003G259200 Sobic009G054500--Sobic007G187300 Sobic009G054500--Sobic006G100332 Sobic002G215700 Sobic002G215700 Sobic009G054500--Sobic002G215700 Sobic001G325200 Sobic001G325200 Sobic003G010600--Sobic001G325200 Sobic003G010600--Sobic009G226300 Sobic003G010600--Sobic004G260000 Sobic003G010600--Sobic009G054500 Sobic003G010600--Sobic009G211400 Sobic003G010600--Sobic008G062200 Sobic003G010600--Sobic006G100332 Sobic003G010600--Sobic005G018500 Sobic003G010600--Sobic003G219600 Sobic001G491800--Sobic001G182500 Sobic001G491800--Sobic004G050200 Sobic001G491800--Sobic006G100332 Sobic001G491800--Sobic002G324000 Sobic001G491800--Sobic003G184900 Sobic001G491800--Sobic002G190500 Sobic001G491800--Sobic001G274800 Sobic001G491800--Sobic004G321800 Sobic001G491800--Sobic004G113300 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic006G127100 Sobic006G127100 Sobic007G219900--Sobic006G127100 Sobic007G219900--Sobic005G018500 Sobic003G366400 Sobic003G366400 Sobic007G219900--Sobic003G366400 Sobic007G219900--Sobic009G054500 Sobic007G219900--Sobic003G148800 Sobic007G219900--Sobic004G260000 Sobic007G219900--Sobic002G215700 Sobic007G219900--Sobic009G226300 Sobic001G227800 Sobic001G227800 Sobic007G219900--Sobic001G227800
Octagon: transcription factors


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