Gene annotation
Transcriptome id Sobic.001G491800.2,Sobic.001G491800.1
Synonym Sb01g045980
Functional annotation expressed protein
UniProt A0A1B6QQA7 , C5WWT9
Pfam PF09366
Panther DB PTHR34133 PTHR34133:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39530 : Protein of unknown function (DUF1997)
RAP-DB (Rice) LOC_Os03g07200.2 : expressed protein
MaizeGDB (Corn) Zm00025a053351
Brachypodium -
Barley HORVU4Hr1G074780.10 , HORVU4Hr1G074780.6 , HORVU4Hr1G074780.7 , HORVU4Hr1G074780.4 , HORVU4Hr1G074780.5 , HORVU4Hr1G074780.2 , HORVU4Hr1G074780.3 , HORVU4Hr1G074780.1 , HORVU4Hr1G074780.8 , HORVU4Hr1G074780.9
Wheat TraesCS4B02G283800 , TraesCS4A02G019800 , TraesCS4D02G282600
Populus -


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cDNA sequences
Sobic.001G491800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G182500 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.004G050200 Strongly up-regulated in leaf samples inoculated with S. reilianum f. sp. zeae but not S. reilianum f. sp. reilianum(PubMedID : 22670753)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
3 Sobic.006G100332 - -
4 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
5 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
6 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
7 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
9 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
10 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.003G105800 No apical meristem protein, putative, expressed -
12 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.003G087200 nuclease PA3, putative, expressed -
16 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
17 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
18 Sobic.006G036900 vignain precursor, putative, expressed -
19 Sobic.007G219900 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
20 Sobic.010G182500 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran


Gene co-expression network
sample Sobic001G491800 Sobic001G491800 Sobic001G182500 Sobic001G182500 Sobic001G491800--Sobic001G182500 Sobic004G050200 Sobic004G050200 Sobic001G491800--Sobic004G050200 Sobic006G100332 Sobic006G100332 Sobic001G491800--Sobic006G100332 Sobic002G324000 Sobic002G324000 Sobic001G491800--Sobic002G324000 Sobic003G184900 Sobic003G184900 Sobic001G491800--Sobic003G184900 Sobic002G190500 Sobic002G190500 Sobic001G491800--Sobic002G190500 Sobic001G274800 Sobic001G274800 Sobic001G491800--Sobic001G274800 Sobic004G321800 Sobic004G321800 Sobic001G491800--Sobic004G321800 Sobic004G113300 Sobic004G113300 Sobic001G491800--Sobic004G113300 Sobic001G182500--Sobic003G184900 Sobic001G182500--Sobic006G100332 Sobic004G260000 Sobic004G260000 Sobic001G182500--Sobic004G260000 Sobic001G182500--Sobic004G050200 Sobic009G054500 Sobic009G054500 Sobic001G182500--Sobic009G054500 Sobic003G010600 Sobic003G010600 Sobic001G182500--Sobic003G010600 Sobic001G182500--Sobic001G491800 Sobic009G226300 Sobic009G226300 Sobic001G182500--Sobic009G226300 Sobic007G219900 Sobic007G219900 Sobic001G182500--Sobic007G219900 Sobic004G050200--Sobic004G113300 Sobic004G050200--Sobic001G182500 Sobic004G050200--Sobic003G184900 Sobic006G036900 Sobic006G036900 Sobic004G050200--Sobic006G036900 Sobic004G050200--Sobic002G324000 Sobic004G050200--Sobic002G190500 Sobic004G050200--Sobic001G491800 Sobic004G050200--Sobic001G274800 Sobic008G079300 Sobic008G079300 Sobic004G050200--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G100332--Sobic001G150600 Sobic003G087200 Sobic003G087200 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic007G187300 Sobic007G187300 Sobic006G100332--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic006G100332--Sobic006G030700 Sobic001G249300 Sobic001G249300 Sobic006G100332--Sobic001G249300 Sobic003G148800 Sobic003G148800 Sobic006G100332--Sobic003G148800 Sobic002G324000--Sobic002G190500 Sobic002G324000--Sobic004G113300 Sobic002G324000--Sobic003G184900 Sobic005G130400 Sobic005G130400 Sobic002G324000--Sobic005G130400 Sobic002G324000--Sobic004G321800 Sobic002G324000--Sobic004G050200 Sobic002G324000--Sobic001G274800 Sobic008G182700 Sobic008G182700 Sobic002G324000--Sobic008G182700 Sobic004G060900 Sobic004G060900 Sobic002G324000--Sobic004G060900 Sobic003G105800 Sobic003G105800 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic003G184900--Sobic006G100332 Sobic007G225900 Sobic007G225900 Sobic003G184900--Sobic007G225900 Sobic003G184900--Sobic002G324000 Sobic003G184900--Sobic003G087200 Sobic005G178100 Sobic005G178100 Sobic003G184900--Sobic005G178100 Sobic003G184900--Sobic001G182500 Sobic002G190500--Sobic002G324000 Sobic002G190500--Sobic004G113300 Sobic002G190500--Sobic005G130400 Sobic002G190500--Sobic004G050200 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic002G190500--Sobic008G079300 Sobic001G274800--Sobic003G184900 Sobic001G274800--Sobic006G100332 Sobic001G274800--Sobic004G321800 Sobic001G274800--Sobic002G324000 Sobic004G206401 Sobic004G206401 Sobic001G274800--Sobic004G206401 Sobic001G274800--Sobic003G105800 Sobic007G068100 Sobic007G068100 Sobic001G274800--Sobic007G068100 Sobic007G186200 Sobic007G186200 Sobic001G274800--Sobic007G186200 Sobic001G274800--Sobic001G182500 Sobic004G321800--Sobic006G100332 Sobic004G321800--Sobic003G087200 Sobic004G321800--Sobic003G148800 Sobic004G321800--Sobic009G226300 Sobic001G325200 Sobic001G325200 Sobic004G321800--Sobic001G325200 Sobic004G321800--Sobic003G105800 Sobic004G321800--Sobic003G184900 Sobic004G321800--Sobic001G150600 Sobic004G320600 Sobic004G320600 Sobic004G321800--Sobic004G320600 Sobic004G113300--Sobic002G324000 Sobic004G113300--Sobic002G190500 Sobic004G113300--Sobic004G050200 Sobic004G113300--Sobic003G184900 Sobic004G113300--Sobic008G079300 Sobic004G113300--Sobic005G130400 Sobic004G113300--Sobic001G274800 Sobic004G113300--Sobic003G105800 Sobic004G113300--Sobic004G060900
Octagon: transcription factors


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