Gene annotation
Transcriptome id Sobic.003G228400.1
Synonym Sb03g028640, CYP72A14
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450 72A1, putative, expressed
UniProt A0A1B6Q4U2
Pfam PF00067
Panther DB PTHR24282 PTHR24282:SF19
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G14680 : cytochrome P450, family 72, subfamily A, polypeptide 14
RAP-DB (Rice) LOC_Os01g43740.1 : cytochrome P450 72A1, putative, expressed
MaizeGDB (Corn) Zm00025a038616 , Zm00025a028334 , Zm00025a010563
Brachypodium KQK08831 , KQK08832 , KQK08833
Barley HORVU3Hr1G056090.9 , HORVU3Hr1G056090.8 , HORVU3Hr1G056090.1 , HORVU3Hr1G056090.3 , HORVU3Hr1G056090.2 , HORVU3Hr1G056090.4 , HORVU3Hr1G056090.7 , HORVU3Hr1G056090.6 , HORVU7Hr1G116310.1 , HORVU7Hr1G116310.3 , HORVU7Hr1G116310.6 , HORVU7Hr1G116310.8 , HORVU7Hr1G116310.2 , HORVU7Hr1G116310.5 , HORVU7Hr1G116310.4 , HORVU7Hr1G116310.7 , HORVU3Hr1G056090.11 , HORVU3Hr1G056090.10 , HORVU3Hr1G056090.12
Wheat TraesCS7D02G512800 , TraesCS3D02G226000 , TraesCS3B02G256300 , TraesCS3B02G256300 , TraesCS5D02G041800 , TraesCS3A02G228200 , TraesCS1D02G111200 , TraesCS1D02G111200 , TraesCS7B02G440900 , TraesCS1B02G130000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.008G009200 SAG20, putative, expressed -
3 Sobic.003G098000 armadillo/beta-catenin repeat family protein, putative, expressed K08332: vacuolar protein 8
4 Sobic.003G228100 cytochrome P450 72A1, putative, expressed -
5 Sobic.004G237600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
6 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.007G186000 radical SAM enzyme, putative, expressed K01012: biotin synthase
8 Sobic.003G216232 - -
9 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
10 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -
11 Sobic.001G146200 OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
12 Sobic.003G265100 lipid phosphatase protein, putative, expressed -
13 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
14 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
17 Sobic.010G242400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
19 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
20 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -


Gene co-expression network
sample Sobic003G228400 Sobic003G228400 Sobic005G217200 Sobic005G217200 Sobic003G228400--Sobic005G217200 Sobic008G009200 Sobic008G009200 Sobic003G228400--Sobic008G009200 Sobic003G098000 Sobic003G098000 Sobic003G228400--Sobic003G098000 Sobic003G228100 Sobic003G228100 Sobic003G228400--Sobic003G228100 Sobic004G237600 Sobic004G237600 Sobic003G228400--Sobic004G237600 Sobic003G244600 Sobic003G244600 Sobic003G228400--Sobic003G244600 Sobic007G186000 Sobic007G186000 Sobic003G228400--Sobic007G186000 Sobic003G216232 Sobic003G216232 Sobic003G228400--Sobic003G216232 Sobic010G210200 Sobic010G210200 Sobic003G228400--Sobic010G210200 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic005G217200--Sobic010G210200 Sobic003G363100 Sobic003G363100 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic005G217200--Sobic004G237600 Sobic003G276000 Sobic003G276000 Sobic005G217200--Sobic003G276000 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic008G009100 Sobic008G009100 Sobic008G009200--Sobic008G009100 Sobic001G469500 Sobic001G469500 Sobic008G009200--Sobic001G469500 Sobic010G044700 Sobic010G044700 Sobic008G009200--Sobic010G044700 Sobic005G171500 Sobic005G171500 Sobic008G009200--Sobic005G171500 Sobic001G354400 Sobic001G354400 Sobic008G009200--Sobic001G354400 Sobic008G009200--Sobic005G217200 Sobic008G009200--Sobic003G244600 Sobic002G035200 Sobic002G035200 Sobic008G009200--Sobic002G035200 Sobic002G122800 Sobic002G122800 Sobic008G009200--Sobic002G122800 Sobic002G375300 Sobic002G375300 Sobic003G098000--Sobic002G375300 Sobic004G102400 Sobic004G102400 Sobic003G098000--Sobic004G102400 Sobic003G098000--Sobic003G228100 Sobic004G042300 Sobic004G042300 Sobic003G098000--Sobic004G042300 Sobic003G246700 Sobic003G246700 Sobic003G098000--Sobic003G246700 Sobic004G337200 Sobic004G337200 Sobic003G098000--Sobic004G337200 Sobic002G217400 Sobic002G217400 Sobic003G098000--Sobic002G217400 Sobic005G203800 Sobic005G203800 Sobic003G098000--Sobic005G203800 Sobic001G057800 Sobic001G057800 Sobic003G098000--Sobic001G057800 Sobic001G185500 Sobic001G185500 Sobic003G228100--Sobic001G185500 Sobic001G089800 Sobic001G089800 Sobic003G228100--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic003G228100--Sobic001G003000 Sobic001G350700 Sobic001G350700 Sobic003G228100--Sobic001G350700 Sobic003G228100--Sobic004G042300 Sobic008G093000 Sobic008G093000 Sobic003G228100--Sobic008G093000 Sobic003G228100--Sobic003G098000 Sobic004G005200 Sobic004G005200 Sobic003G228100--Sobic004G005200 Sobic003G352600 Sobic003G352600 Sobic003G228100--Sobic003G352600 Sobic001G123000 Sobic001G123000 Sobic004G237600--Sobic001G123000 Sobic001G180900 Sobic001G180900 Sobic004G237600--Sobic001G180900 Sobic006G176600 Sobic006G176600 Sobic004G237600--Sobic006G176600 Sobic006G034000 Sobic006G034000 Sobic004G237600--Sobic006G034000 Sobic006G148200 Sobic006G148200 Sobic004G237600--Sobic006G148200 Sobic004G234900 Sobic004G234900 Sobic004G237600--Sobic004G234900 Sobic002G361300 Sobic002G361300 Sobic004G237600--Sobic002G361300 Sobic006G225600 Sobic006G225600 Sobic004G237600--Sobic006G225600 Sobic001G323000 Sobic001G323000 Sobic004G237600--Sobic001G323000 Sobic003G244600--Sobic008G189200 Sobic006G030700 Sobic006G030700 Sobic003G244600--Sobic006G030700 Sobic002G304000 Sobic002G304000 Sobic003G244600--Sobic002G304000 Sobic006G091700 Sobic006G091700 Sobic003G244600--Sobic006G091700 Sobic003G105800 Sobic003G105800 Sobic003G244600--Sobic003G105800 Sobic005G216000 Sobic005G216000 Sobic003G244600--Sobic005G216000 Sobic007G186200 Sobic007G186200 Sobic003G244600--Sobic007G186200 Sobic001G015500 Sobic001G015500 Sobic003G244600--Sobic001G015500 Sobic009G226300 Sobic009G226300 Sobic003G244600--Sobic009G226300 Sobic007G186000--Sobic006G034000 Sobic007G186000--Sobic009G126900 Sobic003G436300 Sobic003G436300 Sobic007G186000--Sobic003G436300 Sobic008G074700 Sobic008G074700 Sobic007G186000--Sobic008G074700 Sobic007G186000--Sobic008G093000 Sobic008G110600 Sobic008G110600 Sobic007G186000--Sobic008G110600 Sobic004G119100 Sobic004G119100 Sobic007G186000--Sobic004G119100 Sobic002G270500 Sobic002G270500 Sobic007G186000--Sobic002G270500 Sobic004G182600 Sobic004G182600 Sobic007G186000--Sobic004G182600 Sobic003G348400 Sobic003G348400 Sobic003G216232--Sobic003G348400 Sobic001G074200 Sobic001G074200 Sobic003G216232--Sobic001G074200 Sobic007G125900 Sobic007G125900 Sobic003G216232--Sobic007G125900 Sobic003G338400 Sobic003G338400 Sobic003G216232--Sobic003G338400 Sobic005G117400 Sobic005G117400 Sobic003G216232--Sobic005G117400 Sobic003G216232--Sobic008G189200 Sobic003G216232--Sobic005G217200 Sobic005G136300 Sobic005G136300 Sobic003G216232--Sobic005G136300 Sobic001G151800 Sobic001G151800 Sobic003G216232--Sobic001G151800 Sobic006G132500 Sobic006G132500 Sobic010G210200--Sobic006G132500 Sobic001G132000 Sobic001G132000 Sobic010G210200--Sobic001G132000 Sobic005G215900 Sobic005G215900 Sobic010G210200--Sobic005G215900 Sobic009G167700 Sobic009G167700 Sobic010G210200--Sobic009G167700 Sobic003G061800 Sobic003G061800 Sobic010G210200--Sobic003G061800 Sobic003G442500 Sobic003G442500 Sobic010G210200--Sobic003G442500 Sobic010G210200--Sobic005G217200 Sobic009G210600 Sobic009G210600 Sobic010G210200--Sobic009G210600 Sobic003G061400 Sobic003G061400 Sobic010G210200--Sobic003G061400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.