Gene annotation
Transcriptome id Sobic.001G318900.1
Synonym GSTU18, GST29, Sb01g030980, ATGSTU18
Functional annotation glutathione S-transferase GSTU6, putative, expressed
UniProt C5WUJ5
Pfam PF00043 PF02798
Panther DB PTHR11260 PTHR11260:SF269
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10360 : glutathione S-transferase TAU 18
RAP-DB (Rice) LOC_Os10g38160.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a003100 , Zm00025a003103 , Zm00025a003102 , Zm00025a053625 , Zm00025a053627 , Zm00025a053626
Brachypodium KQJ97546 , KQJ97555 , KQK02220
Barley HORVU1Hr1G049210.1 , HORVU1Hr1G049210.2 , HORVU1Hr1G049160.3 , HORVU1Hr1G049160.2 , HORVU1Hr1G049160.1 , HORVU1Hr1G049120.1
Wheat TraesCS1B02G194700 , TraesCS6A02G139100 , TraesCS4A02G435300 , TraesCS1D02G189800 , TraesCS5D02G027500 , TraesCS1A02G186700 , TraesCS1B02G194500 , TraesCS1D02G189900 , TraesCS5D02G027300 , TraesCS7D02G044500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G376200 expressed protein -
2 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
3 Sobic.001G146200 OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
5 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
6 Sobic.001G454200 - -
7 Sobic.006G246300 protein kinase, putative, expressed -
8 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
9 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.004G092000 expressed protein -
11 Sobic.001G351100 LOL3, putative, expressed -
12 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.003G413500 expressed protein -
14 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
16 Sobic.001G222200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@endo-beta-N-acetylglucosaminidase, putative, expressed -
17 Sobic.007G054100 stress-induced protein, putative, expressed -
18 Sobic.003G339900 expressed protein -
19 Sobic.003G422700 amino acid permease family protein, putative, expressed -
20 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G318900 Sobic001G318900 Sobic003G376200 Sobic003G376200 Sobic001G318900--Sobic003G376200 Sobic003G276000 Sobic003G276000 Sobic001G318900--Sobic003G276000 Sobic001G146200 Sobic001G146200 Sobic001G318900--Sobic001G146200 Sobic002G273700 Sobic002G273700 Sobic001G318900--Sobic002G273700 Sobic003G363100 Sobic003G363100 Sobic001G318900--Sobic003G363100 Sobic001G454200 Sobic001G454200 Sobic001G318900--Sobic001G454200 Sobic006G246300 Sobic006G246300 Sobic001G318900--Sobic006G246300 Sobic010G018100 Sobic010G018100 Sobic001G318900--Sobic010G018100 Sobic005G217200 Sobic005G217200 Sobic001G318900--Sobic005G217200 Sobic004G220600 Sobic004G220600 Sobic003G376200--Sobic004G220600 Sobic002G216500 Sobic002G216500 Sobic003G376200--Sobic002G216500 Sobic004G092000 Sobic004G092000 Sobic003G376200--Sobic004G092000 Sobic003G291700 Sobic003G291700 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic002G209100 Sobic002G209100 Sobic003G376200--Sobic002G209100 Sobic010G273700 Sobic010G273700 Sobic003G376200--Sobic010G273700 Sobic008G060300 Sobic008G060300 Sobic003G376200--Sobic008G060300 Sobic002G195800 Sobic002G195800 Sobic003G376200--Sobic002G195800 Sobic010G162900 Sobic010G162900 Sobic003G276000--Sobic010G162900 Sobic008G090800 Sobic008G090800 Sobic003G276000--Sobic008G090800 Sobic003G276000--Sobic001G454200 Sobic003G276000--Sobic005G217200 Sobic008G189200 Sobic008G189200 Sobic003G276000--Sobic008G189200 Sobic003G000600 Sobic003G000600 Sobic003G276000--Sobic003G000600 Sobic003G276000--Sobic010G018100 Sobic003G276000--Sobic003G363100 Sobic003G276000--Sobic001G318900 Sobic001G146200--Sobic003G276000 Sobic001G146200--Sobic001G318900 Sobic001G146200--Sobic001G454200 Sobic003G216232 Sobic003G216232 Sobic001G146200--Sobic003G216232 Sobic001G146200--Sobic005G217200 Sobic003G031100 Sobic003G031100 Sobic001G146200--Sobic003G031100 Sobic010G047800 Sobic010G047800 Sobic001G146200--Sobic010G047800 Sobic007G074400 Sobic007G074400 Sobic001G146200--Sobic007G074400 Sobic001G146200--Sobic010G018100 Sobic007G054100 Sobic007G054100 Sobic002G273700--Sobic007G054100 Sobic003G308700 Sobic003G308700 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G373100 Sobic002G373100 Sobic002G273700--Sobic002G373100 Sobic002G040800 Sobic002G040800 Sobic002G273700--Sobic002G040800 Sobic008G001400 Sobic008G001400 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic009G082200 Sobic009G082200 Sobic002G273700--Sobic009G082200 Sobic006G042200 Sobic006G042200 Sobic002G273700--Sobic006G042200 Sobic001G469500 Sobic001G469500 Sobic003G363100--Sobic001G469500 Sobic003G363100--Sobic005G217200 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic004G028600 Sobic004G028600 Sobic003G363100--Sobic004G028600 Sobic002G274800 Sobic002G274800 Sobic003G363100--Sobic002G274800 Sobic003G363100--Sobic003G276000 Sobic001G454200--Sobic003G276000 Sobic001G454200--Sobic008G090800 Sobic001G454200--Sobic003G363100 Sobic001G454200--Sobic010G162900 Sobic001G454200--Sobic010G018100 Sobic001G454200--Sobic005G217200 Sobic001G454200--Sobic001G318900 Sobic004G182300 Sobic004G182300 Sobic001G454200--Sobic004G182300 Sobic001G454200--Sobic001G146200 Sobic010G009400 Sobic010G009400 Sobic006G246300--Sobic010G009400 Sobic001G319100 Sobic001G319100 Sobic006G246300--Sobic001G319100 Sobic005G229400 Sobic005G229400 Sobic006G246300--Sobic005G229400 Sobic006G246300--Sobic001G318900 Sobic002G130700 Sobic002G130700 Sobic006G246300--Sobic002G130700 Sobic001G339600 Sobic001G339600 Sobic006G246300--Sobic001G339600 Sobic008G142100 Sobic008G142100 Sobic006G246300--Sobic008G142100 Sobic009G099500 Sobic009G099500 Sobic006G246300--Sobic009G099500 Sobic003G261900 Sobic003G261900 Sobic006G246300--Sobic003G261900 Sobic010G043400 Sobic010G043400 Sobic010G018100--Sobic010G043400 Sobic001G222200 Sobic001G222200 Sobic010G018100--Sobic001G222200 Sobic010G018100--Sobic002G274800 Sobic004G124200 Sobic004G124200 Sobic010G018100--Sobic004G124200 Sobic001G320200 Sobic001G320200 Sobic010G018100--Sobic001G320200 Sobic010G018100--Sobic003G363100 Sobic010G018100--Sobic008G189200 Sobic003G388251 Sobic003G388251 Sobic010G018100--Sobic003G388251 Sobic002G215800 Sobic002G215800 Sobic010G018100--Sobic002G215800 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic005G217200--Sobic003G276000 Sobic003G244600 Sobic003G244600 Sobic005G217200--Sobic003G244600 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.