Gene annotation
Transcriptome id Sobic.010G057200.1
Synonym
Functional annotation -
UniProt C5Z5A8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247550 - -
2 Sobic.001G247550 - -
3 Sobic.001G247550 - -
4 Sobic.008G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate-binding protein precursor, putative, expressed -
5 Sobic.008G091614 - -
6 Sobic.009G023501 - -
7 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
8 Sobic.005G043900 protein kinase domain containing protein, expressed -
9 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
10 Sobic.002G011700 expressed protein -
11 Sobic.003G278000 expressed protein -
12 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
13 Sobic.004G105700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
15 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
16 Sobic.006G054900 DUF538 domain containing protein, putative, expressed -
17 Sobic.001G354400 O-methyltransferase, putative, expressed -
18 Sobic.003G203200 hypothetical protein -
19 Sobic.010G061800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
20 Sobic.004G058300 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -


Gene co-expression network
sample Sobic010G057200 Sobic010G057200 Sobic001G247550 Sobic001G247550 Sobic010G057200--Sobic001G247550 Sobic008G048900 Sobic008G048900 Sobic010G057200--Sobic008G048900 Sobic008G091614 Sobic008G091614 Sobic010G057200--Sobic008G091614 Sobic009G023501 Sobic009G023501 Sobic010G057200--Sobic009G023501 Sobic004G226100 Sobic004G226100 Sobic010G057200--Sobic004G226100 Sobic005G043900 Sobic005G043900 Sobic010G057200--Sobic005G043900 Sobic005G043600 Sobic005G043600 Sobic010G057200--Sobic005G043600 Sobic001G247550--Sobic001G247550 Sobic001G247550--Sobic008G048900 Sobic001G247550--Sobic008G091614 Sobic002G011700 Sobic002G011700 Sobic001G247550--Sobic002G011700 Sobic001G247550--Sobic005G043600 Sobic007G198500 Sobic007G198500 Sobic001G247550--Sobic007G198500 Sobic001G247550--Sobic010G057200 Sobic001G247550--Sobic009G023501 Sobic008G048900--Sobic001G247550 Sobic006G246600 Sobic006G246600 Sobic008G048900--Sobic006G246600 Sobic008G048900--Sobic007G198500 Sobic008G048900--Sobic005G043600 Sobic008G048900--Sobic005G043900 Sobic001G354400 Sobic001G354400 Sobic008G048900--Sobic001G354400 Sobic003G203200 Sobic003G203200 Sobic008G048900--Sobic003G203200 Sobic008G091614--Sobic001G247550 Sobic008G091614--Sobic008G048900 Sobic004G200800 Sobic004G200800 Sobic008G091614--Sobic004G200800 Sobic003G181201 Sobic003G181201 Sobic008G091614--Sobic003G181201 Sobic002G055400 Sobic002G055400 Sobic008G091614--Sobic002G055400 Sobic008G091614--Sobic010G057200 Sobic008G091614--Sobic002G011700 Sobic009G023501--Sobic001G247550 Sobic009G023501--Sobic008G048900 Sobic010G165950 Sobic010G165950 Sobic009G023501--Sobic010G165950 Sobic009G023501--Sobic005G043600 Sobic009G023501--Sobic010G057200 Sobic009G023501--Sobic007G198500 Sobic002G089100 Sobic002G089100 Sobic009G023501--Sobic002G089100 Sobic007G034000 Sobic007G034000 Sobic004G226100--Sobic007G034000 Sobic004G226100--Sobic001G354400 Sobic001G316400 Sobic001G316400 Sobic004G226100--Sobic001G316400 Sobic007G092700 Sobic007G092700 Sobic004G226100--Sobic007G092700 Sobic002G122800 Sobic002G122800 Sobic004G226100--Sobic002G122800 Sobic004G226100--Sobic003G203200 Sobic001G069900 Sobic001G069900 Sobic004G226100--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic004G226100--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic004G226100--Sobic002G085300 Sobic005G043900--Sobic003G203200 Sobic005G043900--Sobic006G246600 Sobic005G043900--Sobic005G043600 Sobic005G043900--Sobic008G048900 Sobic005G043900--Sobic002G089100 Sobic002G088900 Sobic002G088900 Sobic005G043900--Sobic002G088900 Sobic006G091700 Sobic006G091700 Sobic005G043900--Sobic006G091700 Sobic008G074400 Sobic008G074400 Sobic005G043900--Sobic008G074400 Sobic005G043900--Sobic001G316400 Sobic005G043600--Sobic007G198500 Sobic002G058200 Sobic002G058200 Sobic005G043600--Sobic002G058200 Sobic005G043600--Sobic005G043900 Sobic008G175032 Sobic008G175032 Sobic005G043600--Sobic008G175032 Sobic002G098200 Sobic002G098200 Sobic005G043600--Sobic002G098200 Sobic005G043600--Sobic008G048900 Sobic005G043600--Sobic003G203200 Sobic001G359500 Sobic001G359500 Sobic005G043600--Sobic001G359500 Sobic005G043600--Sobic001G247550
Octagon: transcription factors


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