Gene annotation
Transcriptome id Sobic.010G061800.1,Sobic.010G061800.2
Synonym Sb10g005340
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nodulin, putative, expressed
UniProt A0A1W0VRS0 , C5Z5F2
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80530 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os06g08110.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a042874 , Zm00025a049812
Brachypodium KQK19344 , KQK19341 , KQK19342 , KQK19343 , PNT76397 , PNT76396
Barley HORVU7Hr1G029200.2 , HORVU7Hr1G029200.3 , HORVU7Hr1G029200.1 , HORVU7Hr1G029200.6 , HORVU7Hr1G029200.4 , HORVU7Hr1G029200.5 , HORVU7Hr1G029060.2 , HORVU7Hr1G029060.1
Wheat TraesCS7A02G141500 , TraesCS7B02G042800 , TraesCS7A02G142400 , TraesCS7A02G142400 , TraesCS7B02G043200 , TraesCS7D02G142800 , TraesCS7D02G142800 , TraesCS7D02G143600
Populus -


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cDNA sequences
Sobic.010G061800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G203900 OsGrx_S17 - glutaredoxin subgroup II, expressed -
2 Sobic.001G214100 expressed protein -
3 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
4 Sobic.006G090500 chloride channel C(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K05016: chloride channel 7
5 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
6 Sobic.003G403700 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K04551: ubiquitin B
7 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
8 Sobic.006G247900 phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
9 Sobic.008G179900 cysteine synthase, putative, expressed K01738: cysteine synthase
10 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
11 Sobic.006G043400 - -
12 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
14 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
15 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
16 Sobic.002G263600 expressed protein -
17 Sobic.004G314700 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
18 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
19 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
20 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G061800 Sobic010G061800 Sobic001G203900 Sobic001G203900 Sobic010G061800--Sobic001G203900 Sobic001G214100 Sobic001G214100 Sobic010G061800--Sobic001G214100 Sobic008G093000 Sobic008G093000 Sobic010G061800--Sobic008G093000 Sobic006G090500 Sobic006G090500 Sobic010G061800--Sobic006G090500 Sobic004G261900 Sobic004G261900 Sobic010G061800--Sobic004G261900 Sobic003G403700 Sobic003G403700 Sobic010G061800--Sobic003G403700 Sobic002G262300 Sobic002G262300 Sobic010G061800--Sobic002G262300 Sobic006G247900 Sobic006G247900 Sobic010G061800--Sobic006G247900 Sobic008G179900 Sobic008G179900 Sobic010G061800--Sobic008G179900 Sobic003G365300 Sobic003G365300 Sobic001G203900--Sobic003G365300 Sobic010G131900 Sobic010G131900 Sobic001G203900--Sobic010G131900 Sobic002G226900 Sobic002G226900 Sobic001G203900--Sobic002G226900 Sobic001G199100 Sobic001G199100 Sobic001G203900--Sobic001G199100 Sobic001G203900--Sobic008G093000 Sobic003G012200 Sobic003G012200 Sobic001G203900--Sobic003G012200 Sobic003G006300 Sobic003G006300 Sobic001G203900--Sobic003G006300 Sobic004G275700 Sobic004G275700 Sobic001G203900--Sobic004G275700 Sobic009G068500 Sobic009G068500 Sobic001G203900--Sobic009G068500 Sobic001G481900 Sobic001G481900 Sobic001G214100--Sobic001G481900 Sobic006G275100 Sobic006G275100 Sobic001G214100--Sobic006G275100 Sobic007G106800 Sobic007G106800 Sobic001G214100--Sobic007G106800 Sobic006G002300 Sobic006G002300 Sobic001G214100--Sobic006G002300 Sobic004G169000 Sobic004G169000 Sobic001G214100--Sobic004G169000 Sobic008G151100 Sobic008G151100 Sobic001G214100--Sobic008G151100 Sobic003G115900 Sobic003G115900 Sobic001G214100--Sobic003G115900 Sobic003G198800 Sobic003G198800 Sobic001G214100--Sobic003G198800 Sobic006G257800 Sobic006G257800 Sobic001G214100--Sobic006G257800 Sobic008G093000--Sobic001G199100 Sobic010G064600 Sobic010G064600 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic009G207000 Sobic009G207000 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic002G244100 Sobic002G244100 Sobic008G093000--Sobic002G244100 Sobic002G130800 Sobic002G130800 Sobic006G090500--Sobic002G130800 Sobic001G350700 Sobic001G350700 Sobic006G090500--Sobic001G350700 Sobic006G135600 Sobic006G135600 Sobic006G090500--Sobic006G135600 Sobic006G090500--Sobic001G481900 Sobic006G090500--Sobic008G093000 Sobic004G005200 Sobic004G005200 Sobic006G090500--Sobic004G005200 Sobic001G070000 Sobic001G070000 Sobic006G090500--Sobic001G070000 Sobic004G233200 Sobic004G233200 Sobic006G090500--Sobic004G233200 Sobic001G159600 Sobic001G159600 Sobic006G090500--Sobic001G159600 Sobic001G504900 Sobic001G504900 Sobic004G261900--Sobic001G504900 Sobic002G266000 Sobic002G266000 Sobic004G261900--Sobic002G266000 Sobic004G034600 Sobic004G034600 Sobic004G261900--Sobic004G034600 Sobic003G322700 Sobic003G322700 Sobic004G261900--Sobic003G322700 Sobic003G398100 Sobic003G398100 Sobic004G261900--Sobic003G398100 Sobic004G225200 Sobic004G225200 Sobic004G261900--Sobic004G225200 Sobic005G149700 Sobic005G149700 Sobic004G261900--Sobic005G149700 Sobic009G207600 Sobic009G207600 Sobic004G261900--Sobic009G207600 Sobic001G517800 Sobic001G517800 Sobic004G261900--Sobic001G517800 Sobic003G403700--Sobic001G070000 Sobic003G403700--Sobic003G087000 Sobic003G403700--Sobic010G131900 Sobic003G403700--Sobic004G005200 Sobic003G403700--Sobic010G061800 Sobic003G403700--Sobic001G203900 Sobic004G181900 Sobic004G181900 Sobic003G403700--Sobic004G181900 Sobic001G406100 Sobic001G406100 Sobic003G403700--Sobic001G406100 Sobic001G219300 Sobic001G219300 Sobic003G403700--Sobic001G219300 Sobic007G210500 Sobic007G210500 Sobic002G262300--Sobic007G210500 Sobic009G080400 Sobic009G080400 Sobic002G262300--Sobic009G080400 Sobic001G305500 Sobic001G305500 Sobic002G262300--Sobic001G305500 Sobic006G104600 Sobic006G104600 Sobic002G262300--Sobic006G104600 Sobic002G128200 Sobic002G128200 Sobic002G262300--Sobic002G128200 Sobic003G320700 Sobic003G320700 Sobic002G262300--Sobic003G320700 Sobic002G262300--Sobic001G517800 Sobic003G242000 Sobic003G242000 Sobic002G262300--Sobic003G242000 Sobic001G062300 Sobic001G062300 Sobic002G262300--Sobic001G062300 Sobic004G135400 Sobic004G135400 Sobic006G247900--Sobic004G135400 Sobic003G014500 Sobic003G014500 Sobic006G247900--Sobic003G014500 Sobic008G167800 Sobic008G167800 Sobic006G247900--Sobic008G167800 Sobic001G110600 Sobic001G110600 Sobic006G247900--Sobic001G110600 SobicK025800 SobicK025800 Sobic006G247900--SobicK025800 Sobic006G086600 Sobic006G086600 Sobic006G247900--Sobic006G086600 Sobic003G279900 Sobic003G279900 Sobic006G247900--Sobic003G279900 Sobic001G447300 Sobic001G447300 Sobic006G247900--Sobic001G447300 Sobic010G205200 Sobic010G205200 Sobic006G247900--Sobic010G205200 Sobic004G080100 Sobic004G080100 Sobic008G179900--Sobic004G080100 Sobic004G225100 Sobic004G225100 Sobic008G179900--Sobic004G225100 Sobic004G329300 Sobic004G329300 Sobic008G179900--Sobic004G329300 Sobic009G139900 Sobic009G139900 Sobic008G179900--Sobic009G139900 Sobic001G462500 Sobic001G462500 Sobic008G179900--Sobic001G462500 Sobic003G110400 Sobic003G110400 Sobic008G179900--Sobic003G110400 Sobic008G074400 Sobic008G074400 Sobic008G179900--Sobic008G074400 Sobic001G016700 Sobic001G016700 Sobic008G179900--Sobic001G016700 Sobic002G111000 Sobic002G111000 Sobic008G179900--Sobic002G111000
Octagon: transcription factors


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