Gene annotation
Transcriptome id Sobic.001G203900.2,Sobic.001G203900.1
Synonym Sb01g018010
Functional annotation OsGrx_S17 - glutaredoxin subgroup II, expressed
UniProt A0A1B6QJZ2
Pfam PF00085 PF00462
Panther DB PTHR10293 PTHR10293:SF40
NCBI CDD KOG0911; Glutaredoxin-related protein
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT4G04950 : thioredoxin family protein
RAP-DB (Rice) LOC_Os10g35720.1 : OsGrx_S17 - glutaredoxin subgroup II, expressed
MaizeGDB (Corn) Zm00025a017496 , Zm00025a006434
Brachypodium KQJ97321
Barley HORVU1Hr1G045160.7 , HORVU1Hr1G045160.6
Wheat TraesCS1D02G166900 , TraesCS1A02G168900
Populus -


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cDNA sequences
Sobic.001G203900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
2 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
3 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
4 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
5 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
6 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
7 Sobic.003G006300 expressed protein -
8 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
9 Sobic.009G068500 expressed protein -
10 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
11 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.002G263600 expressed protein -
13 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
14 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
15 Sobic.010G228400 zinc finger, C3HC4 type, domain containing protein, expressed -
16 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
17 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
18 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
19 Sobic.006G082400 expressed protein -
20 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -


Gene co-expression network
sample Sobic001G203900 Sobic001G203900 Sobic003G365300 Sobic003G365300 Sobic001G203900--Sobic003G365300 Sobic010G131900 Sobic010G131900 Sobic001G203900--Sobic010G131900 Sobic002G226900 Sobic002G226900 Sobic001G203900--Sobic002G226900 Sobic001G199100 Sobic001G199100 Sobic001G203900--Sobic001G199100 Sobic008G093000 Sobic008G093000 Sobic001G203900--Sobic008G093000 Sobic003G012200 Sobic003G012200 Sobic001G203900--Sobic003G012200 Sobic003G006300 Sobic003G006300 Sobic001G203900--Sobic003G006300 Sobic004G275700 Sobic004G275700 Sobic001G203900--Sobic004G275700 Sobic009G068500 Sobic009G068500 Sobic001G203900--Sobic009G068500 Sobic001G390800 Sobic001G390800 Sobic003G365300--Sobic001G390800 Sobic006G002000 Sobic006G002000 Sobic003G365300--Sobic006G002000 Sobic006G082400 Sobic006G082400 Sobic003G365300--Sobic006G082400 Sobic003G365300--Sobic004G275700 Sobic002G111000 Sobic002G111000 Sobic003G365300--Sobic002G111000 Sobic003G365300--Sobic001G203900 Sobic003G365300--Sobic009G068500 Sobic003G365300--Sobic003G006300 Sobic001G107600 Sobic001G107600 Sobic003G365300--Sobic001G107600 Sobic009G084000 Sobic009G084000 Sobic010G131900--Sobic009G084000 Sobic002G311100 Sobic002G311100 Sobic010G131900--Sobic002G311100 Sobic010G074300 Sobic010G074300 Sobic010G131900--Sobic010G074300 Sobic002G263600 Sobic002G263600 Sobic010G131900--Sobic002G263600 Sobic010G147100 Sobic010G147100 Sobic010G131900--Sobic010G147100 Sobic010G131900--Sobic003G365300 Sobic010G131900--Sobic009G068500 Sobic003G264100 Sobic003G264100 Sobic010G131900--Sobic003G264100 Sobic010G131900--Sobic001G203900 Sobic009G075800 Sobic009G075800 Sobic002G226900--Sobic009G075800 Sobic002G226900--Sobic004G275700 Sobic002G226900--Sobic003G012200 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic010G000900 Sobic010G000900 Sobic002G226900--Sobic010G000900 Sobic002G226900--Sobic001G203900 Sobic001G199100--Sobic003G012200 Sobic001G199100--Sobic004G275700 Sobic001G199100--Sobic009G075800 Sobic009G207000 Sobic009G207000 Sobic001G199100--Sobic009G207000 Sobic001G199100--Sobic008G093000 Sobic001G091300 Sobic001G091300 Sobic001G199100--Sobic001G091300 Sobic001G199100--Sobic002G226900 Sobic004G206700 Sobic004G206700 Sobic001G199100--Sobic004G206700 Sobic004G348300 Sobic004G348300 Sobic001G199100--Sobic004G348300 Sobic008G093000--Sobic001G199100 Sobic010G064600 Sobic010G064600 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic002G244100 Sobic002G244100 Sobic008G093000--Sobic002G244100 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic003G012200--Sobic004G348300 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic003G006300--Sobic009G068500 Sobic003G006300--Sobic003G365300 Sobic001G263600 Sobic001G263600 Sobic003G006300--Sobic001G263600 Sobic003G195000 Sobic003G195000 Sobic003G006300--Sobic003G195000 Sobic001G007000 Sobic001G007000 Sobic003G006300--Sobic001G007000 Sobic003G006300--Sobic003G264100 Sobic003G404500 Sobic003G404500 Sobic003G006300--Sobic003G404500 Sobic002G359400 Sobic002G359400 Sobic003G006300--Sobic002G359400 Sobic003G006300--Sobic010G131900 Sobic004G275700--Sobic001G199100 Sobic004G275700--Sobic001G091300 Sobic004G275700--Sobic009G075800 Sobic002G262900 Sobic002G262900 Sobic004G275700--Sobic002G262900 Sobic004G275700--Sobic001G007000 Sobic010G020400 Sobic010G020400 Sobic004G275700--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic004G275700--Sobic002G008800 Sobic004G275700--Sobic003G365300 Sobic004G275700--Sobic003G012200 Sobic009G068500--Sobic001G007000 Sobic001G193300 Sobic001G193300 Sobic009G068500--Sobic001G193300 Sobic009G068500--Sobic003G264100 Sobic007G093800 Sobic007G093800 Sobic009G068500--Sobic007G093800 Sobic009G068500--Sobic003G006300 Sobic009G068500--Sobic003G365300 Sobic009G068500--Sobic002G359400 Sobic009G068500--Sobic010G020400 Sobic009G068500--Sobic010G251000
Octagon: transcription factors


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