Gene annotation
Transcriptome id Sobic.004G226400.1,Sobic.004G226400.2
Synonym Sb04g027080
Functional annotation expressed protein
UniProt C5XY84
Pfam PF03097
Panther DB PTHR23032 PTHR23032:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73390 : Endosomal targeting BRO1-like domain-containing protein
RAP-DB (Rice) LOC_Os04g44530.2,LOC_Os04g44530.3 : expressed protein
MaizeGDB (Corn) Zm00025a056550
Brachypodium -
Barley HORVU2Hr1G090810.6 , HORVU2Hr1G090810.7 , HORVU2Hr1G090810.4 , HORVU2Hr1G090810.5 , HORVU2Hr1G090810.8 , HORVU2Hr1G090810.9 , HORVU2Hr1G090810.14 , HORVU2Hr1G090810.15 , HORVU2Hr1G090810.16 , HORVU2Hr1G090810.10 , HORVU2Hr1G090810.11 , HORVU2Hr1G090810.12 , HORVU2Hr1G090810.13
Wheat TraesCS2A02G375000 , TraesCS2A02G375000 , TraesCS2B02G391900 , TraesCS2D02G371300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
3 Sobic.004G130800 NAD dependent epimerase/dehydratase family protein, putative, expressed -
4 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
5 Sobic.010G061800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
6 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
7 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
8 Sobic.009G072700 O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
9 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
10 Sobic.005G043900 protein kinase domain containing protein, expressed -
11 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
12 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
13 Sobic.009G225000 transmembrane protein 93, putative, expressed -
14 Sobic.007G098200 - -
15 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
16 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
17 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
19 Sobic.008G179900 cysteine synthase, putative, expressed K01738: cysteine synthase
20 Sobic.003G228100 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic004G226400 Sobic004G226400 Sobic002G244100 Sobic002G244100 Sobic004G226400--Sobic002G244100 Sobic008G093000 Sobic008G093000 Sobic004G226400--Sobic008G093000 Sobic004G130800 Sobic004G130800 Sobic004G226400--Sobic004G130800 Sobic004G225100 Sobic004G225100 Sobic004G226400--Sobic004G225100 Sobic010G061800 Sobic010G061800 Sobic004G226400--Sobic010G061800 Sobic001G089800 Sobic001G089800 Sobic004G226400--Sobic001G089800 Sobic008G074400 Sobic008G074400 Sobic004G226400--Sobic008G074400 Sobic009G072700 Sobic009G072700 Sobic004G226400--Sobic009G072700 Sobic002G088900 Sobic002G088900 Sobic004G226400--Sobic002G088900 Sobic009G167700 Sobic009G167700 Sobic002G244100--Sobic009G167700 Sobic002G244100--Sobic001G089800 Sobic002G244100--Sobic008G093000 Sobic002G244100--Sobic004G225100 Sobic003G354400 Sobic003G354400 Sobic002G244100--Sobic003G354400 Sobic010G064600 Sobic010G064600 Sobic002G244100--Sobic010G064600 Sobic004G167400 Sobic004G167400 Sobic002G244100--Sobic004G167400 Sobic001G334600 Sobic001G334600 Sobic002G244100--Sobic001G334600 Sobic009G126900 Sobic009G126900 Sobic002G244100--Sobic009G126900 Sobic001G199100 Sobic001G199100 Sobic008G093000--Sobic001G199100 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic009G207000 Sobic009G207000 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic008G093000--Sobic002G244100 Sobic002G199900 Sobic002G199900 Sobic004G130800--Sobic002G199900 Sobic003G117900 Sobic003G117900 Sobic004G130800--Sobic003G117900 Sobic002G402000 Sobic002G402000 Sobic004G130800--Sobic002G402000 Sobic004G067100 Sobic004G067100 Sobic004G130800--Sobic004G067100 Sobic003G075500 Sobic003G075500 Sobic004G130800--Sobic003G075500 Sobic003G323600 Sobic003G323600 Sobic004G130800--Sobic003G323600 Sobic010G042100 Sobic010G042100 Sobic004G130800--Sobic010G042100 Sobic001G184000 Sobic001G184000 Sobic004G130800--Sobic001G184000 Sobic004G080100 Sobic004G080100 Sobic004G130800--Sobic004G080100 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic004G225100--Sobic002G244100 Sobic004G225100--Sobic001G334600 Sobic004G225100--Sobic009G167700 Sobic003G388251 Sobic003G388251 Sobic004G225100--Sobic003G388251 Sobic005G178100 Sobic005G178100 Sobic004G225100--Sobic005G178100 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic001G203900 Sobic001G203900 Sobic010G061800--Sobic001G203900 Sobic001G214100 Sobic001G214100 Sobic010G061800--Sobic001G214100 Sobic010G061800--Sobic008G093000 Sobic006G090500 Sobic006G090500 Sobic010G061800--Sobic006G090500 Sobic004G261900 Sobic004G261900 Sobic010G061800--Sobic004G261900 Sobic003G403700 Sobic003G403700 Sobic010G061800--Sobic003G403700 Sobic002G262300 Sobic002G262300 Sobic010G061800--Sobic002G262300 Sobic006G247900 Sobic006G247900 Sobic010G061800--Sobic006G247900 Sobic008G179900 Sobic008G179900 Sobic010G061800--Sobic008G179900 Sobic001G003000 Sobic001G003000 Sobic001G089800--Sobic001G003000 Sobic004G341200 Sobic004G341200 Sobic001G089800--Sobic004G341200 Sobic009G193700 Sobic009G193700 Sobic001G089800--Sobic009G193700 Sobic006G271200 Sobic006G271200 Sobic001G089800--Sobic006G271200 Sobic001G089800--Sobic009G167700 Sobic001G089800--Sobic002G244100 Sobic004G102400 Sobic004G102400 Sobic001G089800--Sobic004G102400 Sobic001G089800--Sobic010G064600 Sobic001G089800--Sobic003G354400 Sobic001G316400 Sobic001G316400 Sobic008G074400--Sobic001G316400 Sobic008G074400--Sobic004G225100 Sobic001G069900 Sobic001G069900 Sobic008G074400--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic008G074400--Sobic002G087800 Sobic001G359500 Sobic001G359500 Sobic008G074400--Sobic001G359500 Sobic006G091700 Sobic006G091700 Sobic008G074400--Sobic006G091700 Sobic001G504900 Sobic001G504900 Sobic008G074400--Sobic001G504900 Sobic009G072700--Sobic010G064600 Sobic006G260500 Sobic006G260500 Sobic009G072700--Sobic006G260500 Sobic005G177700 Sobic005G177700 Sobic009G072700--Sobic005G177700 Sobic009G072700--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic009G072700--Sobic007G075500 Sobic009G072700--Sobic001G301700 Sobic010G261600 Sobic010G261600 Sobic009G072700--Sobic010G261600 Sobic003G365300 Sobic003G365300 Sobic009G072700--Sobic003G365300 Sobic004G228800 Sobic004G228800 Sobic009G072700--Sobic004G228800 Sobic002G013000 Sobic002G013000 Sobic002G088900--Sobic002G013000 Sobic002G089100 Sobic002G089100 Sobic002G088900--Sobic002G089100 Sobic003G204501 Sobic003G204501 Sobic002G088900--Sobic003G204501 Sobic004G008800 Sobic004G008800 Sobic002G088900--Sobic004G008800 Sobic006G246600 Sobic006G246600 Sobic002G088900--Sobic006G246600 Sobic004G106900 Sobic004G106900 Sobic002G088900--Sobic004G106900 Sobic005G043900 Sobic005G043900 Sobic002G088900--Sobic005G043900 Sobic003G149200 Sobic003G149200 Sobic002G088900--Sobic003G149200 Sobic002G085300 Sobic002G085300 Sobic002G088900--Sobic002G085300
Octagon: transcription factors


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