Gene annotation
Transcriptome id Sobic.004G130800.2
Synonym Sb04g011550
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt A0A194YQG2
Pfam PF01370
Panther DB PTHR10366:SF244 PTHR10366
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G19440 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g34480.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a019754
Brachypodium -
Barley HORVU3Hr1G049030.2 , HORVU3Hr1G049030.1 , HORVU5Hr1G122150.2 , HORVU5Hr1G122150.3 , HORVU5Hr1G122150.1 , HORVU5Hr1G122150.4
Wheat TraesCS5D02G540800 , TraesCS4A02G331600 , TraesCS5B02G547200 , TraesCS4A02G331900 , TraesCS4A02G331900 , TraesCS5B02G547000 , TraesCS5B02G547000 , TraesCS5B02G547000 , TraesCS5D02G541100 , TraesCS5D02G541100
Populus -


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cDNA sequences
Sobic.004G130800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G199900 expressed protein -
2 Sobic.003G117900 protein kinase, putative, expressed -
3 Sobic.002G402000 expressed protein -
4 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
5 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
6 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
7 Sobic.010G042100 transcription elongation factor 1, putative, expressed -
8 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
9 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
10 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
11 Sobic.001G013500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
12 Sobic.003G370900 expressed protein -
13 Sobic.003G246700 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed -
14 Sobic.004G226400 expressed protein -
15 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
16 Sobic.001G106700 expressed protein -
17 Sobic.001G460600 RING zinc finger protein-like, putative, expressed -
18 Sobic.005G003800 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
19 Sobic.009G129900 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
20 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic004G130800 Sobic004G130800 Sobic002G199900 Sobic002G199900 Sobic004G130800--Sobic002G199900 Sobic003G117900 Sobic003G117900 Sobic004G130800--Sobic003G117900 Sobic002G402000 Sobic002G402000 Sobic004G130800--Sobic002G402000 Sobic004G067100 Sobic004G067100 Sobic004G130800--Sobic004G067100 Sobic003G075500 Sobic003G075500 Sobic004G130800--Sobic003G075500 Sobic003G323600 Sobic003G323600 Sobic004G130800--Sobic003G323600 Sobic010G042100 Sobic010G042100 Sobic004G130800--Sobic010G042100 Sobic001G184000 Sobic001G184000 Sobic004G130800--Sobic001G184000 Sobic004G080100 Sobic004G080100 Sobic004G130800--Sobic004G080100 Sobic002G199900--Sobic004G130800 Sobic002G199900--Sobic003G075500 Sobic002G199900--Sobic003G117900 Sobic002G199900--Sobic004G067100 Sobic004G017800 Sobic004G017800 Sobic002G199900--Sobic004G017800 Sobic010G072000 Sobic010G072000 Sobic002G199900--Sobic010G072000 Sobic010G185500 Sobic010G185500 Sobic002G199900--Sobic010G185500 Sobic004G225500 Sobic004G225500 Sobic002G199900--Sobic004G225500 Sobic010G195701 Sobic010G195701 Sobic002G199900--Sobic010G195701 Sobic003G117900--Sobic010G042100 Sobic003G370900 Sobic003G370900 Sobic003G117900--Sobic003G370900 Sobic001G106700 Sobic001G106700 Sobic003G117900--Sobic001G106700 Sobic001G329100 Sobic001G329100 Sobic003G117900--Sobic001G329100 Sobic001G007200 Sobic001G007200 Sobic003G117900--Sobic001G007200 Sobic004G167400 Sobic004G167400 Sobic003G117900--Sobic004G167400 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800 Sobic002G402000--Sobic001G007200 Sobic001G047400 Sobic001G047400 Sobic002G402000--Sobic001G047400 Sobic010G229400 Sobic010G229400 Sobic002G402000--Sobic010G229400 Sobic002G402000--Sobic003G370900 Sobic009G222500 Sobic009G222500 Sobic002G402000--Sobic009G222500 Sobic002G402000--Sobic003G117900 Sobic009G024200 Sobic009G024200 Sobic002G402000--Sobic009G024200 Sobic007G216100 Sobic007G216100 Sobic002G402000--Sobic007G216100 Sobic010G083700 Sobic010G083700 Sobic002G402000--Sobic010G083700 Sobic004G067100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic004G067100--Sobic003G117900 Sobic001G508100 Sobic001G508100 Sobic004G067100--Sobic001G508100 Sobic004G067100--Sobic004G167400 Sobic002G226900 Sobic002G226900 Sobic004G067100--Sobic002G226900 Sobic006G090000 Sobic006G090000 Sobic004G067100--Sobic006G090000 Sobic003G077900 Sobic003G077900 Sobic004G067100--Sobic003G077900 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic003G075500--Sobic006G264300 Sobic004G277000 Sobic004G277000 Sobic003G075500--Sobic004G277000 Sobic003G075500--Sobic010G072000 Sobic003G075500--Sobic001G184000 Sobic009G003900 Sobic009G003900 Sobic003G075500--Sobic009G003900 Sobic003G075500--Sobic001G329100 Sobic002G249000 Sobic002G249000 Sobic003G075500--Sobic002G249000 Sobic003G075500--Sobic002G199900 Sobic007G045600 Sobic007G045600 Sobic003G323600--Sobic007G045600 Sobic007G019100 Sobic007G019100 Sobic003G323600--Sobic007G019100 Sobic006G232200 Sobic006G232200 Sobic003G323600--Sobic006G232200 Sobic001G459500 Sobic001G459500 Sobic003G323600--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic003G323600--Sobic003G367451 Sobic007G142500 Sobic007G142500 Sobic003G323600--Sobic007G142500 Sobic001G132100 Sobic001G132100 Sobic003G323600--Sobic001G132100 Sobic001G236300 Sobic001G236300 Sobic003G323600--Sobic001G236300 Sobic001G048832 Sobic001G048832 Sobic003G323600--Sobic001G048832 Sobic010G042100--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic010G042100--Sobic001G433400 Sobic010G042100--Sobic003G117900 Sobic009G135600 Sobic009G135600 Sobic010G042100--Sobic009G135600 Sobic002G385900 Sobic002G385900 Sobic010G042100--Sobic002G385900 Sobic010G042100--Sobic003G367451 Sobic003G253000 Sobic003G253000 Sobic010G042100--Sobic003G253000 Sobic004G020000 Sobic004G020000 Sobic010G042100--Sobic004G020000 Sobic001G461900 Sobic001G461900 Sobic010G042100--Sobic001G461900 Sobic001G184000--Sobic009G003900 Sobic001G184000--Sobic003G075500 Sobic010G176700 Sobic010G176700 Sobic001G184000--Sobic010G176700 Sobic001G184000--Sobic004G277000 Sobic001G184000--Sobic002G249000 Sobic001G010400 Sobic001G010400 Sobic001G184000--Sobic001G010400 Sobic010G224200 Sobic010G224200 Sobic001G184000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic001G184000--Sobic005G117400 Sobic001G184000--Sobic006G264300 Sobic010G049100 Sobic010G049100 Sobic004G080100--Sobic010G049100 Sobic004G080100--Sobic004G067100 Sobic004G080100--Sobic003G246700 Sobic004G080100--Sobic002G226900 Sobic001G219300 Sobic001G219300 Sobic004G080100--Sobic001G219300 Sobic008G032600 Sobic008G032600 Sobic004G080100--Sobic008G032600 Sobic003G139800 Sobic003G139800 Sobic004G080100--Sobic003G139800 Sobic008G179900 Sobic008G179900 Sobic004G080100--Sobic008G179900 Sobic008G089900 Sobic008G089900 Sobic004G080100--Sobic008G089900
Octagon: transcription factors


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