Gene annotation
Transcriptome id Sobic.002G199900.1
Synonym Sb02g024560
Functional annotation expressed protein
UniProt C5XC92
Pfam -
Panther DB PTHR33474 PTHR33474:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g24620.1 : expressed protein
MaizeGDB (Corn) Zm00025a046953
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G130800 NAD dependent epimerase/dehydratase family protein, putative, expressed -
2 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
3 Sobic.003G117900 protein kinase, putative, expressed -
4 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
5 Sobic.004G017800 ubiquitin-conjugating enzyme 28(PubMedID : 26465154)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
6 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
8 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
9 Sobic.010G195701 - -
10 Sobic.004G277000 purine permease, putative, expressed -
11 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
12 Sobic.001G106700 expressed protein -
13 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
14 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
15 Sobic.010G042100 transcription elongation factor 1, putative, expressed -
16 Sobic.003G246700 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed -
17 Sobic.004G167400 expressed protein -
18 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
19 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
20 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N


Gene co-expression network
sample Sobic002G199900 Sobic002G199900 Sobic004G130800 Sobic004G130800 Sobic002G199900--Sobic004G130800 Sobic003G075500 Sobic003G075500 Sobic002G199900--Sobic003G075500 Sobic003G117900 Sobic003G117900 Sobic002G199900--Sobic003G117900 Sobic004G067100 Sobic004G067100 Sobic002G199900--Sobic004G067100 Sobic004G017800 Sobic004G017800 Sobic002G199900--Sobic004G017800 Sobic010G072000 Sobic010G072000 Sobic002G199900--Sobic010G072000 Sobic010G185500 Sobic010G185500 Sobic002G199900--Sobic010G185500 Sobic004G225500 Sobic004G225500 Sobic002G199900--Sobic004G225500 Sobic010G195701 Sobic010G195701 Sobic002G199900--Sobic010G195701 Sobic004G130800--Sobic002G199900 Sobic004G130800--Sobic003G117900 Sobic002G402000 Sobic002G402000 Sobic004G130800--Sobic002G402000 Sobic004G130800--Sobic004G067100 Sobic004G130800--Sobic003G075500 Sobic003G323600 Sobic003G323600 Sobic004G130800--Sobic003G323600 Sobic010G042100 Sobic010G042100 Sobic004G130800--Sobic010G042100 Sobic001G184000 Sobic001G184000 Sobic004G130800--Sobic001G184000 Sobic004G080100 Sobic004G080100 Sobic004G130800--Sobic004G080100 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic003G075500--Sobic006G264300 Sobic004G277000 Sobic004G277000 Sobic003G075500--Sobic004G277000 Sobic003G075500--Sobic010G072000 Sobic003G075500--Sobic001G184000 Sobic009G003900 Sobic009G003900 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic002G249000 Sobic002G249000 Sobic003G075500--Sobic002G249000 Sobic003G075500--Sobic002G199900 Sobic003G117900--Sobic010G042100 Sobic003G370900 Sobic003G370900 Sobic003G117900--Sobic003G370900 Sobic001G106700 Sobic001G106700 Sobic003G117900--Sobic001G106700 Sobic003G117900--Sobic001G329100 Sobic001G007200 Sobic001G007200 Sobic003G117900--Sobic001G007200 Sobic004G167400 Sobic004G167400 Sobic003G117900--Sobic004G167400 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800 Sobic004G067100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic004G067100--Sobic003G117900 Sobic001G508100 Sobic001G508100 Sobic004G067100--Sobic001G508100 Sobic004G067100--Sobic004G167400 Sobic002G226900 Sobic002G226900 Sobic004G067100--Sobic002G226900 Sobic006G090000 Sobic006G090000 Sobic004G067100--Sobic006G090000 Sobic003G077900 Sobic003G077900 Sobic004G067100--Sobic003G077900 Sobic003G442900 Sobic003G442900 Sobic004G017800--Sobic003G442900 Sobic004G209900 Sobic004G209900 Sobic004G017800--Sobic004G209900 Sobic002G204200 Sobic002G204200 Sobic004G017800--Sobic002G204200 Sobic004G017800--Sobic003G117900 Sobic004G017800--Sobic010G185500 Sobic004G017800--Sobic010G042100 Sobic007G216100 Sobic007G216100 Sobic004G017800--Sobic007G216100 Sobic001G220400 Sobic001G220400 Sobic004G017800--Sobic001G220400 Sobic004G017800--Sobic002G199900 Sobic010G071900 Sobic010G071900 Sobic010G072000--Sobic010G071900 Sobic010G072000--Sobic004G277000 Sobic010G072000--Sobic003G075500 Sobic010G072000--Sobic006G264300 Sobic002G180600 Sobic002G180600 Sobic010G072000--Sobic002G180600 Sobic010G072000--Sobic009G003900 Sobic010G072000--Sobic002G264400 Sobic010G072000--Sobic010G185500 Sobic002G267500 Sobic002G267500 Sobic010G072000--Sobic002G267500 Sobic008G033600 Sobic008G033600 Sobic010G185500--Sobic008G033600 Sobic010G185500--Sobic010G071900 Sobic010G185500--Sobic002G264400 Sobic003G206900 Sobic003G206900 Sobic010G185500--Sobic003G206900 Sobic008G189300 Sobic008G189300 Sobic010G185500--Sobic008G189300 Sobic010G185500--Sobic006G264300 Sobic010G019900 Sobic010G019900 Sobic010G185500--Sobic010G019900 Sobic010G243200 Sobic010G243200 Sobic010G185500--Sobic010G243200 Sobic003G228000 Sobic003G228000 Sobic010G185500--Sobic003G228000 Sobic004G225500--Sobic008G189300 Sobic002G155500 Sobic002G155500 Sobic004G225500--Sobic002G155500 Sobic004G272800 Sobic004G272800 Sobic004G225500--Sobic004G272800 Sobic004G300900 Sobic004G300900 Sobic004G225500--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic004G225500--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic004G225500--Sobic001G340500 Sobic002G153500 Sobic002G153500 Sobic004G225500--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic004G225500--Sobic010G154700 Sobic010G121300 Sobic010G121300 Sobic004G225500--Sobic010G121300 Sobic010G216200 Sobic010G216200 Sobic010G195701--Sobic010G216200 Sobic006G244700 Sobic006G244700 Sobic010G195701--Sobic006G244700 Sobic001G428200 Sobic001G428200 Sobic010G195701--Sobic001G428200 Sobic010G195701--Sobic004G067100 Sobic010G012800 Sobic010G012800 Sobic010G195701--Sobic010G012800 Sobic010G195701--Sobic003G077900 Sobic001G364600 Sobic001G364600 Sobic010G195701--Sobic001G364600 Sobic004G060600 Sobic004G060600 Sobic010G195701--Sobic004G060600 Sobic010G277100 Sobic010G277100 Sobic010G195701--Sobic010G277100
Octagon: transcription factors


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