Gene annotation
Transcriptome id Sobic.003G075500.1
Synonym Sb03g006370
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5XQ35
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF307
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53940 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os01g04990.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a023488
Brachypodium KQK02657 , PNT69917 , PNT69916
Barley HORVU3Hr1G011350.17 , HORVU3Hr1G011350.16 , HORVU3Hr1G011350.15 , HORVU3Hr1G011350.14 , HORVU3Hr1G011350.13 , HORVU3Hr1G011350.12 , HORVU3Hr1G011350.11 , HORVU3Hr1G011350.10 , HORVU3Hr1G011350.18 , HORVU3Hr1G011350.9 , HORVU3Hr1G011350.7 , HORVU3Hr1G011350.6 , HORVU3Hr1G011350.5 , HORVU3Hr1G011350.4 , HORVU3Hr1G011350.3 , HORVU3Hr1G011350.2 , HORVU3Hr1G011350.1 , HORVU6Hr1G018800.1 , HORVU6Hr1G018800.2 , HORVU3Hr1G011350.8
Wheat TraesCS3B02G070700 , TraesCS3A02G058200 , TraesCS3D02G058400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
2 Sobic.006G264300 GA18008-PA, putative, expressed -
3 Sobic.004G277000 purine permease, putative, expressed -
4 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
5 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
6 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
7 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
9 Sobic.002G199900 expressed protein -
10 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
12 Sobic.003G117900 protein kinase, putative, expressed -
13 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
16 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
17 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
18 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
19 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.004G167400 expressed protein -


Gene co-expression network
sample Sobic003G075500 Sobic003G075500 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic003G075500--Sobic006G264300 Sobic004G277000 Sobic004G277000 Sobic003G075500--Sobic004G277000 Sobic010G072000 Sobic010G072000 Sobic003G075500--Sobic010G072000 Sobic001G184000 Sobic001G184000 Sobic003G075500--Sobic001G184000 Sobic009G003900 Sobic009G003900 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic002G249000 Sobic002G249000 Sobic003G075500--Sobic002G249000 Sobic002G199900 Sobic002G199900 Sobic003G075500--Sobic002G199900 Sobic002G264400--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic002G264400--Sobic004G293700 Sobic002G267500 Sobic002G267500 Sobic002G264400--Sobic002G267500 Sobic002G180600 Sobic002G180600 Sobic002G264400--Sobic002G180600 Sobic003G253000 Sobic003G253000 Sobic002G264400--Sobic003G253000 Sobic002G202300 Sobic002G202300 Sobic002G264400--Sobic002G202300 Sobic010G253800 Sobic010G253800 Sobic002G264400--Sobic010G253800 Sobic005G034400 Sobic005G034400 Sobic002G264400--Sobic005G034400 Sobic002G264400--Sobic003G075500 Sobic006G264300--Sobic002G264400 Sobic002G083266 Sobic002G083266 Sobic006G264300--Sobic002G083266 Sobic006G264300--Sobic002G202300 Sobic006G264300--Sobic002G180600 Sobic006G264300--Sobic002G267500 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic006G264300--Sobic005G034400 Sobic006G264300--Sobic003G253000 Sobic004G050000 Sobic004G050000 Sobic004G277000--Sobic004G050000 Sobic009G043600 Sobic009G043600 Sobic004G277000--Sobic009G043600 Sobic004G277000--Sobic002G249000 Sobic004G277000--Sobic009G003900 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G276100 Sobic004G276100 Sobic004G277000--Sobic004G276100 Sobic009G177800 Sobic009G177800 Sobic004G277000--Sobic009G177800 Sobic004G277000--Sobic002G264400 Sobic010G071900 Sobic010G071900 Sobic010G072000--Sobic010G071900 Sobic010G072000--Sobic004G277000 Sobic010G072000--Sobic003G075500 Sobic010G072000--Sobic006G264300 Sobic010G072000--Sobic002G180600 Sobic010G072000--Sobic009G003900 Sobic010G072000--Sobic002G264400 Sobic010G185500 Sobic010G185500 Sobic010G072000--Sobic010G185500 Sobic010G072000--Sobic002G267500 Sobic001G184000--Sobic009G003900 Sobic001G184000--Sobic003G075500 Sobic010G176700 Sobic010G176700 Sobic001G184000--Sobic010G176700 Sobic001G184000--Sobic004G277000 Sobic001G184000--Sobic002G249000 Sobic001G010400 Sobic001G010400 Sobic001G184000--Sobic001G010400 Sobic010G224200 Sobic010G224200 Sobic001G184000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic001G184000--Sobic005G117400 Sobic001G184000--Sobic006G264300 Sobic009G003900--Sobic004G277000 Sobic009G003900--Sobic002G249000 Sobic009G003900--Sobic004G050000 Sobic009G003900--Sobic005G117400 Sobic009G003900--Sobic002G264400 Sobic009G003900--Sobic001G184000 Sobic002G090200 Sobic002G090200 Sobic009G003900--Sobic002G090200 Sobic009G003900--Sobic002G180600 Sobic009G003900--Sobic010G072000 Sobic001G329100--Sobic006G264300 Sobic005G195200 Sobic005G195200 Sobic001G329100--Sobic005G195200 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic001G329100--Sobic010G253800 Sobic002G122700 Sobic002G122700 Sobic001G329100--Sobic002G122700 Sobic006G254800 Sobic006G254800 Sobic001G329100--Sobic006G254800 Sobic002G249000--Sobic004G277000 Sobic002G249000--Sobic001G010400 Sobic002G249000--Sobic004G050000 Sobic002G249000--Sobic009G003900 Sobic002G249000--Sobic010G224200 Sobic002G249000--Sobic005G117400 Sobic002G249000--Sobic010G176700 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic004G130800 Sobic004G130800 Sobic002G199900--Sobic004G130800 Sobic002G199900--Sobic003G075500 Sobic002G199900--Sobic003G117900 Sobic004G067100 Sobic004G067100 Sobic002G199900--Sobic004G067100 Sobic004G017800 Sobic004G017800 Sobic002G199900--Sobic004G017800 Sobic002G199900--Sobic010G072000 Sobic002G199900--Sobic010G185500 Sobic004G225500 Sobic004G225500 Sobic002G199900--Sobic004G225500 Sobic010G195701 Sobic010G195701 Sobic002G199900--Sobic010G195701
Octagon: transcription factors


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