Gene annotation
Transcriptome id Sobic.009G038401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R0S7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g05070.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
2 Sobic.006G140200 sialyltransferase family domain containing protein, expressed -
3 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
5 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
6 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
7 Sobic.002G329100 TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.001G066000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.004G067200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.003G129000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.004G058000 VQ domain containing protein, putative, expressed -
13 Sobic.005G137200 only inducible by pathogen inoculation(PubMedID : 20529887)@Chalcone synthase 7 (Os)(PubMedID : 27208977)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
14 Sobic.004G277000 purine permease, putative, expressed -
15 Sobic.003G442500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CESA2 - cellulose synthase, expressed -
16 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
17 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
18 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
19 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.010G167500 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic009G038401 Sobic009G038401 Sobic002G249000 Sobic002G249000 Sobic009G038401--Sobic002G249000 Sobic006G140200 Sobic006G140200 Sobic009G038401--Sobic006G140200 Sobic010G176700 Sobic010G176700 Sobic009G038401--Sobic010G176700 Sobic001G401300 Sobic001G401300 Sobic009G038401--Sobic001G401300 Sobic008G059200 Sobic008G059200 Sobic009G038401--Sobic008G059200 Sobic003G075500 Sobic003G075500 Sobic009G038401--Sobic003G075500 Sobic002G329100 Sobic002G329100 Sobic009G038401--Sobic002G329100 Sobic001G066000 Sobic001G066000 Sobic009G038401--Sobic001G066000 Sobic009G043600 Sobic009G043600 Sobic009G038401--Sobic009G043600 Sobic004G277000 Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic010G224200 Sobic010G224200 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic004G058000 Sobic004G058000 Sobic006G140200--Sobic004G058000 Sobic006G140200--Sobic002G249000 Sobic006G140200--Sobic009G038401 Sobic001G454100 Sobic001G454100 Sobic006G140200--Sobic001G454100 Sobic006G140200--Sobic004G050000 Sobic006G140200--Sobic001G066000 Sobic006G140200--Sobic005G117400 Sobic001G157200 Sobic001G157200 Sobic006G140200--Sobic001G157200 Sobic003G215800 Sobic003G215800 Sobic006G140200--Sobic003G215800 Sobic003G061400 Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic010G176700--Sobic002G249000 Sobic010G176700--Sobic009G003900 Sobic001G184000 Sobic001G184000 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic003G442500 Sobic003G442500 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic010G176700--Sobic001G010400 Sobic010G176700--Sobic004G277000 Sobic001G401200 Sobic001G401200 Sobic001G401300--Sobic001G401200 Sobic001G400700 Sobic001G400700 Sobic001G401300--Sobic001G400700 Sobic008G034500 Sobic008G034500 Sobic001G401300--Sobic008G034500 Sobic001G401300--Sobic003G215800 Sobic002G333900 Sobic002G333900 Sobic001G401300--Sobic002G333900 Sobic008G191600 Sobic008G191600 Sobic001G401300--Sobic008G191600 Sobic001G247900 Sobic001G247900 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic001G401300--Sobic009G043600 Sobic001G281400 Sobic001G281400 Sobic008G059200--Sobic001G281400 Sobic009G177800 Sobic009G177800 Sobic008G059200--Sobic009G177800 Sobic010G149300 Sobic010G149300 Sobic008G059200--Sobic010G149300 Sobic001G399100 Sobic001G399100 Sobic008G059200--Sobic001G399100 Sobic006G173900 Sobic006G173900 Sobic008G059200--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G059200--Sobic004G187900 Sobic002G423300 Sobic002G423300 Sobic008G059200--Sobic002G423300 Sobic002G211900 Sobic002G211900 Sobic008G059200--Sobic002G211900 Sobic001G288800 Sobic001G288800 Sobic008G059200--Sobic001G288800 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic003G075500--Sobic006G264300 Sobic003G075500--Sobic004G277000 Sobic010G072000 Sobic010G072000 Sobic003G075500--Sobic010G072000 Sobic003G075500--Sobic001G184000 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic003G075500--Sobic002G249000 Sobic002G199900 Sobic002G199900 Sobic003G075500--Sobic002G199900 Sobic004G276100 Sobic004G276100 Sobic002G329100--Sobic004G276100 Sobic007G078100 Sobic007G078100 Sobic002G329100--Sobic007G078100 Sobic002G329100--Sobic009G043600 Sobic003G333400 Sobic003G333400 Sobic002G329100--Sobic003G333400 Sobic006G106800 Sobic006G106800 Sobic002G329100--Sobic006G106800 Sobic002G329100--Sobic004G277000 Sobic004G272800 Sobic004G272800 Sobic002G329100--Sobic004G272800 Sobic002G233000 Sobic002G233000 Sobic002G329100--Sobic002G233000 Sobic002G155500 Sobic002G155500 Sobic002G329100--Sobic002G155500 Sobic001G066000--Sobic009G043600 Sobic001G066000--Sobic004G050000 Sobic006G218300 Sobic006G218300 Sobic001G066000--Sobic006G218300 Sobic006G121500 Sobic006G121500 Sobic001G066000--Sobic006G121500 Sobic003G322900 Sobic003G322900 Sobic001G066000--Sobic003G322900 Sobic001G066000--Sobic004G277000 Sobic001G319500 Sobic001G319500 Sobic001G066000--Sobic001G319500 Sobic002G055600 Sobic002G055600 Sobic001G066000--Sobic002G055600 Sobic001G066000--Sobic002G249000 Sobic009G043600--Sobic004G050000 Sobic009G043600--Sobic001G066000 Sobic009G043600--Sobic004G277000 Sobic009G043600--Sobic006G121500 Sobic006G199100 Sobic006G199100 Sobic009G043600--Sobic006G199100 Sobic006G108400 Sobic006G108400 Sobic009G043600--Sobic006G108400 Sobic009G043600--Sobic004G276100 Sobic002G267500 Sobic002G267500 Sobic009G043600--Sobic002G267500 Sobic009G043600--Sobic001G400700
Octagon: transcription factors


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