Gene annotation
Transcriptome id Sobic.003G273200.1,Sobic.003G273200.2
Synonym Sb03g032520
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1B6Q5M6
Pfam -
Panther DB PTHR12565 PTHR12565:SF93
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21330 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g51140.1,LOC_Os01g51140.2 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044411 , Zm00025a027841 , Zm00025a038373 , Zm00025a028423
Brachypodium KQK09409 , KQK08358
Barley HORVU1Hr1G079450.1 , HORVU1Hr1G079450.2 , HORVU3Hr1G048770.2 , HORVU3Hr1G066600.7 , HORVU3Hr1G066600.6 , HORVU3Hr1G066600.5 , HORVU3Hr1G066600.4 , HORVU3Hr1G066600.3 , HORVU3Hr1G066600.2 , HORVU3Hr1G066600.1 , HORVU3Hr1G048770.1
Wheat TraesCS3B02G233700 , TraesCS3B02G233700
Populus -


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cDNA sequences
Sobic.003G273200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G106800 - -
2 Sobic.005G092900 - -
3 Sobic.003G418000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucoanthocyanidin dioxygenase, putative, expressed -
4 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.003G436800 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G211200 expressed protein -
7 Sobic.004G225900 GEM, putative, expressed -
8 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
10 Sobic.010G030401 - -
11 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.002G278300 thaumatin, putative, expressed -
13 Sobic.010G117700 DUF538 domain containing protein, putative, expressed -
14 Sobic.010G061900 plant protein of unknown function domain containing protein, expressed -
15 Sobic.002G282400 expressed protein -
16 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
17 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
19 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
20 Sobic.001G333400 SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic003G273200 Sobic003G273200 Sobic006G106800 Sobic006G106800 Sobic003G273200--Sobic006G106800 Sobic005G092900 Sobic005G092900 Sobic003G273200--Sobic005G092900 Sobic003G418000 Sobic003G418000 Sobic003G273200--Sobic003G418000 Sobic002G328300 Sobic002G328300 Sobic003G273200--Sobic002G328300 Sobic003G436800 Sobic003G436800 Sobic003G273200--Sobic003G436800 Sobic006G211200 Sobic006G211200 Sobic003G273200--Sobic006G211200 Sobic004G225900 Sobic004G225900 Sobic003G273200--Sobic004G225900 Sobic001G400700 Sobic001G400700 Sobic003G273200--Sobic001G400700 Sobic002G333900 Sobic002G333900 Sobic003G273200--Sobic002G333900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic002G353900 Sobic002G353900 Sobic006G106800--Sobic002G353900 Sobic006G106800--Sobic001G400700 Sobic009G143400 Sobic009G143400 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic004G101300 Sobic004G101300 Sobic006G106800--Sobic004G101300 Sobic003G393700 Sobic003G393700 Sobic006G106800--Sobic003G393700 Sobic004G050000 Sobic004G050000 Sobic006G106800--Sobic004G050000 Sobic004G107700 Sobic004G107700 Sobic005G092900--Sobic004G107700 Sobic005G092900--Sobic009G139400 Sobic004G176600 Sobic004G176600 Sobic005G092900--Sobic004G176600 Sobic001G503100 Sobic001G503100 Sobic005G092900--Sobic001G503100 Sobic005G092900--Sobic006G106800 Sobic005G092900--Sobic009G077800 Sobic005G092900--Sobic001G400700 Sobic001G481400 Sobic001G481400 Sobic005G092900--Sobic001G481400 Sobic002G004900 Sobic002G004900 Sobic005G092900--Sobic002G004900 Sobic003G418000--Sobic006G106800 Sobic002G254200 Sobic002G254200 Sobic003G418000--Sobic002G254200 Sobic001G223100 Sobic001G223100 Sobic003G418000--Sobic001G223100 Sobic006G269200 Sobic006G269200 Sobic003G418000--Sobic006G269200 Sobic009G030100 Sobic009G030100 Sobic003G418000--Sobic009G030100 Sobic001G415500 Sobic001G415500 Sobic003G418000--Sobic001G415500 Sobic002G291300 Sobic002G291300 Sobic003G418000--Sobic002G291300 Sobic007G126100 Sobic007G126100 Sobic003G418000--Sobic007G126100 Sobic003G418000--Sobic002G328300 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic002G328300--Sobic009G143400 Sobic003G265200 Sobic003G265200 Sobic002G328300--Sobic003G265200 Sobic002G328300--Sobic006G106800 Sobic009G254900 Sobic009G254900 Sobic002G328300--Sobic009G254900 Sobic005G229700 Sobic005G229700 Sobic002G328300--Sobic005G229700 Sobic002G367400 Sobic002G367400 Sobic002G328300--Sobic002G367400 Sobic008G034500 Sobic008G034500 Sobic002G328300--Sobic008G034500 Sobic009G221400 Sobic009G221400 Sobic002G328300--Sobic009G221400 Sobic001G444400 Sobic001G444400 Sobic003G436800--Sobic001G444400 Sobic010G209900 Sobic010G209900 Sobic003G436800--Sobic010G209900 Sobic002G278300 Sobic002G278300 Sobic003G436800--Sobic002G278300 Sobic004G273400 Sobic004G273400 Sobic003G436800--Sobic004G273400 Sobic001G100700 Sobic001G100700 Sobic003G436800--Sobic001G100700 Sobic009G106800 Sobic009G106800 Sobic003G436800--Sobic009G106800 Sobic009G055100 Sobic009G055100 Sobic003G436800--Sobic009G055100 Sobic005G058800 Sobic005G058800 Sobic003G436800--Sobic005G058800 Sobic001G243500 Sobic001G243500 Sobic003G436800--Sobic001G243500 Sobic006G147000 Sobic006G147000 Sobic006G211200--Sobic006G147000 Sobic003G321700 Sobic003G321700 Sobic006G211200--Sobic003G321700 Sobic007G190800 Sobic007G190800 Sobic006G211200--Sobic007G190800 Sobic007G019000 Sobic007G019000 Sobic006G211200--Sobic007G019000 Sobic004G322200 Sobic004G322200 Sobic006G211200--Sobic004G322200 Sobic010G259900 Sobic010G259900 Sobic006G211200--Sobic010G259900 Sobic007G212600 Sobic007G212600 Sobic006G211200--Sobic007G212600 Sobic001G016400 Sobic001G016400 Sobic006G211200--Sobic001G016400 Sobic003G322400 Sobic003G322400 Sobic006G211200--Sobic003G322400 Sobic001G247600 Sobic001G247600 Sobic004G225900--Sobic001G247600 Sobic002G017800 Sobic002G017800 Sobic004G225900--Sobic002G017800 Sobic001G318500 Sobic001G318500 Sobic004G225900--Sobic001G318500 Sobic004G225900--Sobic009G077800 Sobic002G302500 Sobic002G302500 Sobic004G225900--Sobic002G302500 Sobic010G270500 Sobic010G270500 Sobic004G225900--Sobic010G270500 Sobic009G111000 Sobic009G111000 Sobic004G225900--Sobic009G111000 Sobic004G225900--Sobic002G004900 Sobic001G325400 Sobic001G325400 Sobic004G225900--Sobic001G325400 Sobic001G400800 Sobic001G400800 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic002G183200 Sobic002G183200 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic001G401300 Sobic001G401300 Sobic002G333900--Sobic001G401300 Sobic002G333900--Sobic008G034500 Sobic001G247900 Sobic001G247900 Sobic002G333900--Sobic001G247900 Sobic006G196200 Sobic006G196200 Sobic002G333900--Sobic006G196200 Sobic003G152100 Sobic003G152100 Sobic002G333900--Sobic003G152100 Sobic001G466000 Sobic001G466000 Sobic002G333900--Sobic001G466000 Sobic002G333900--Sobic001G400700 Sobic002G333900--Sobic002G328300 Sobic001G401200 Sobic001G401200 Sobic002G333900--Sobic001G401200
Octagon: transcription factors


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