Gene annotation
Transcriptome id Sobic.009G224800.2,Sobic.009G224800.1
Synonym Sb09g027830
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A1B6PA27 , A0A1Z5R3V4
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF87
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G15150 : MATE efflux family protein
RAP-DB (Rice) LOC_Os05g48040.2,LOC_Os05g48040.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036545
Brachypodium -
Barley HORVU1Hr1G084190.19 , HORVU1Hr1G084190.11 , HORVU1Hr1G084190.10 , HORVU1Hr1G084190.13 , HORVU1Hr1G084190.12 , HORVU1Hr1G084190.15 , HORVU1Hr1G084190.14 , HORVU1Hr1G084190.17 , HORVU1Hr1G084190.16 , HORVU1Hr1G084190.21 , HORVU1Hr1G084190.9 , HORVU1Hr1G084190.8 , HORVU1Hr1G084190.5 , HORVU1Hr1G084190.4 , HORVU1Hr1G084190.7 , HORVU1Hr1G084190.6 , HORVU1Hr1G084190.1 , HORVU1Hr1G084190.3 , HORVU1Hr1G084190.2
Wheat TraesCS1A02G380900 , TraesCS1D02G388600 , TraesCS1D02G388600 , TraesCS3B02G255200 , TraesCS3B02G255200 , TraesCS3D02G227600 , TraesCS3D02G227600 , TraesCS3B02G298700 , TraesCS3D02G265400 , TraesCSU02G003900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
2 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
3 Sobic.009G120000 - -
4 Sobic.003G129000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.002G421800 Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed -
9 Sobic.006G012900 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
10 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.009G032800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
14 Sobic.003G227300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY11, expressed -
15 Sobic.001G009900 pantoate--beta-alanine ligase, putative, expressed K01918: pantoate--beta-alanine ligase
16 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
17 Sobic.002G057300 expressed protein -
18 Sobic.005G043000 heat shock protein-related, putative, expressed -
19 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
20 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic009G224800 Sobic009G224800 Sobic005G213200 Sobic005G213200 Sobic009G224800--Sobic005G213200 Sobic001G100700 Sobic001G100700 Sobic009G224800--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic009G224800--Sobic009G120000 Sobic003G129000 Sobic003G129000 Sobic009G224800--Sobic003G129000 Sobic010G071900 Sobic010G071900 Sobic009G224800--Sobic010G071900 Sobic001G243600 Sobic001G243600 Sobic009G224800--Sobic001G243600 Sobic006G199100 Sobic006G199100 Sobic009G224800--Sobic006G199100 Sobic002G421800 Sobic002G421800 Sobic009G224800--Sobic002G421800 Sobic006G012900 Sobic006G012900 Sobic009G224800--Sobic006G012900 Sobic005G213200--Sobic001G100700 Sobic005G213200--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic005G213200--Sobic009G106800 Sobic001G444400 Sobic001G444400 Sobic005G213200--Sobic001G444400 Sobic004G273400 Sobic004G273400 Sobic005G213200--Sobic004G273400 Sobic005G213200--Sobic010G071900 Sobic010G209900 Sobic010G209900 Sobic005G213200--Sobic010G209900 Sobic001G100700--Sobic005G213200 Sobic001G100700--Sobic001G243500 Sobic001G100700--Sobic001G444400 Sobic001G100700--Sobic001G243600 Sobic001G100700--Sobic009G106800 Sobic001G100700--Sobic009G120000 Sobic001G100700--Sobic004G273400 Sobic001G100700--Sobic010G209900 Sobic001G100700--Sobic003G129000 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic005G051200 Sobic005G051200 Sobic009G120000--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic009G120000--Sobic001G317200 Sobic005G084600 Sobic005G084600 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic009G120000--Sobic001G243600 Sobic009G120000--Sobic005G213200 Sobic003G129000--Sobic007G141500 Sobic003G129000--Sobic003G117600 Sobic002G416600 Sobic002G416600 Sobic003G129000--Sobic002G416600 Sobic005G091500 Sobic005G091500 Sobic003G129000--Sobic005G091500 Sobic003G129000--Sobic001G444400 Sobic003G129000--Sobic004G166700 Sobic003G129000--Sobic009G120000 Sobic001G400700 Sobic001G400700 Sobic003G129000--Sobic001G400700 Sobic003G087300 Sobic003G087300 Sobic003G129000--Sobic003G087300 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic010G071900--Sobic001G100700 Sobic010G071900--Sobic009G120000 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic010G071900--Sobic005G084600 Sobic001G243600--Sobic004G273400 Sobic001G243600--Sobic005G213200 Sobic001G243600--Sobic001G243500 Sobic001G243600--Sobic001G100700 Sobic001G243600--Sobic009G120000 Sobic002G375400 Sobic002G375400 Sobic001G243600--Sobic002G375400 Sobic001G243600--Sobic009G106800 Sobic001G243600--Sobic005G084600 Sobic001G243600--Sobic001G444400 Sobic006G199100--Sobic001G400700 Sobic006G199100--Sobic003G129000 Sobic006G199100--Sobic007G141500 Sobic009G043600 Sobic009G043600 Sobic006G199100--Sobic009G043600 Sobic005G092900 Sobic005G092900 Sobic006G199100--Sobic005G092900 Sobic006G199100--Sobic009G120000 Sobic006G199100--Sobic001G444400 Sobic003G426300 Sobic003G426300 Sobic006G199100--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic006G199100--Sobic005G101800 Sobic002G199650 Sobic002G199650 Sobic002G421800--Sobic002G199650 Sobic002G421800--Sobic001G444400 Sobic009G196400 Sobic009G196400 Sobic002G421800--Sobic009G196400 Sobic002G421800--Sobic007G141500 Sobic002G421800--Sobic003G087300 Sobic006G153100 Sobic006G153100 Sobic002G421800--Sobic006G153100 Sobic010G052700 Sobic010G052700 Sobic002G421800--Sobic010G052700 Sobic002G421800--Sobic002G416600 Sobic001G333400 Sobic001G333400 Sobic002G421800--Sobic001G333400 Sobic006G012900--Sobic005G213200 Sobic002G180600 Sobic002G180600 Sobic006G012900--Sobic002G180600 Sobic004G054300 Sobic004G054300 Sobic006G012900--Sobic004G054300 Sobic006G012900--Sobic010G071900 Sobic009G117900 Sobic009G117900 Sobic006G012900--Sobic009G117900 Sobic010G151000 Sobic010G151000 Sobic006G012900--Sobic010G151000 Sobic006G012900--Sobic001G100700 Sobic010G046300 Sobic010G046300 Sobic006G012900--Sobic010G046300 Sobic010G253800 Sobic010G253800 Sobic006G012900--Sobic010G253800
Octagon: transcription factors


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