Gene annotation
Transcriptome id Sobic.010G138400.1,Sobic.010G138400.4,Sobic.010G138400.5
Synonym Sb10g014190
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A194YJ28 , A0A1W0VSY8 , A0A194YJ35
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF162
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G52450 : MATE efflux family protein
RAP-DB (Rice) LOC_Os06g29844.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a019758 , Zm00025a050692 , Zm00025a043408 , Zm00025a019761
Brachypodium PNT65259 , KQK18425 , KQJ82175 , KQJ82176 , KQJ91725 , PNT65260
Barley HORVU2Hr1G101910.1 , HORVU7Hr1G047080.3 , HORVU3Hr1G005230.1 , HORVU3Hr1G005230.3 , HORVU3Hr1G005230.2 , HORVU7Hr1G047080.24 , HORVU7Hr1G047080.18 , HORVU7Hr1G047080.19 , HORVU7Hr1G047080.4 , HORVU7Hr1G047080.6 , HORVU7Hr1G047080.7 , HORVU1Hr1G080850.10 , HORVU1Hr1G080850.11 , HORVU1Hr1G080850.8 , HORVU1Hr1G080850.9 , HORVU1Hr1G080850.4 , HORVU1Hr1G080850.5 , HORVU1Hr1G080850.6 , HORVU1Hr1G080850.7 , HORVU1Hr1G080850.1 , HORVU1Hr1G080850.2 , HORVU1Hr1G080850.3 , HORVU2Hr1G101860.1 , HORVU7Hr1G047080.12 , HORVU7Hr1G047080.10 , HORVU7Hr1G047080.11 , HORVU7Hr1G047080.17 , HORVU7Hr1G047080.2 , HORVU7Hr1G047080.8 , HORVU7Hr1G047080.23 , HORVU7Hr1G047080.22 , HORVU7Hr1G047080.27 , HORVU7Hr1G047080.26 , HORVU7Hr1G047080.25 , HORVU7Hr1G047080.28
Wheat TraesCS7A02G033200 , TraesCS7D02G230900 , TraesCS7D02G230900 , TraesCS7A02G230100 , TraesCS7D02G230800 , TraesCS7B02G196100 , TraesCS7A02G230500 , TraesCS7B02G196000 , TraesCS7B02G196200 , TraesCS7B02G196300 , TraesCS1D02G357500 , TraesCS1B02G369300 , TraesCS7A02G230200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G159733 - -
2 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
3 Sobic.007G151300 Cupin domain containing protein, expressed -
4 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
5 Sobic.010G117200 DUF538 domain containing protein, putative, expressed -
6 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G050100 Cupin domain containing protein, expressed -
8 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
9 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
12 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
13 Sobic.003G049300 expressed protein -
14 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.010G185000 VQ domain containing protein, putative, expressed -
16 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
17 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.001G235800 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
20 Sobic.003G404600 regulatory protein, putative, expressed -


Gene co-expression network
sample Sobic010G138400 Sobic010G138400 Sobic004G159733 Sobic004G159733 Sobic010G138400--Sobic004G159733 Sobic008G191600 Sobic008G191600 Sobic010G138400--Sobic008G191600 Sobic007G151300 Sobic007G151300 Sobic010G138400--Sobic007G151300 Sobic002G257300 Sobic002G257300 Sobic010G138400--Sobic002G257300 Sobic010G117200 Sobic010G117200 Sobic010G138400--Sobic010G117200 Sobic002G196100 Sobic002G196100 Sobic010G138400--Sobic002G196100 Sobic001G050100 Sobic001G050100 Sobic010G138400--Sobic001G050100 Sobic001G247900 Sobic001G247900 Sobic010G138400--Sobic001G247900 Sobic010G270500 Sobic010G270500 Sobic010G138400--Sobic010G270500 Sobic005G018700 Sobic005G018700 Sobic004G159733--Sobic005G018700 Sobic004G159733--Sobic010G270500 Sobic004G159733--Sobic007G151300 Sobic004G159733--Sobic001G050100 Sobic002G336700 Sobic002G336700 Sobic004G159733--Sobic002G336700 Sobic010G185000 Sobic010G185000 Sobic004G159733--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic004G159733--Sobic006G103000 Sobic003G007600 Sobic003G007600 Sobic004G159733--Sobic003G007600 Sobic003G299300 Sobic003G299300 Sobic004G159733--Sobic003G299300 Sobic008G191600--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic008G191600--Sobic003G192100 Sobic008G032100 Sobic008G032100 Sobic008G191600--Sobic008G032100 Sobic002G312900 Sobic002G312900 Sobic008G191600--Sobic002G312900 Sobic001G400700 Sobic001G400700 Sobic008G191600--Sobic001G400700 Sobic008G191600--Sobic001G247900 Sobic008G191600--Sobic007G151300 Sobic004G101300 Sobic004G101300 Sobic008G191600--Sobic004G101300 Sobic008G191600--Sobic010G270500 Sobic007G151300--Sobic010G270500 Sobic002G247600 Sobic002G247600 Sobic007G151300--Sobic002G247600 Sobic007G151300--Sobic010G185000 Sobic007G151300--Sobic003G007600 Sobic006G243600 Sobic006G243600 Sobic007G151300--Sobic006G243600 Sobic007G151300--Sobic001G050100 Sobic007G151300--Sobic004G159733 Sobic002G017800 Sobic002G017800 Sobic007G151300--Sobic002G017800 Sobic001G462700 Sobic001G462700 Sobic007G151300--Sobic001G462700 Sobic002G398901 Sobic002G398901 Sobic002G257300--Sobic002G398901 Sobic001G418900 Sobic001G418900 Sobic002G257300--Sobic001G418900 Sobic002G190900 Sobic002G190900 Sobic002G257300--Sobic002G190900 Sobic003G209000 Sobic003G209000 Sobic002G257300--Sobic003G209000 Sobic004G051700 Sobic004G051700 Sobic002G257300--Sobic004G051700 Sobic010G239500 Sobic010G239500 Sobic002G257300--Sobic010G239500 Sobic002G418400 Sobic002G418400 Sobic002G257300--Sobic002G418400 Sobic009G119900 Sobic009G119900 Sobic002G257300--Sobic009G119900 Sobic003G363800 Sobic003G363800 Sobic002G257300--Sobic003G363800 Sobic010G117100 Sobic010G117100 Sobic010G117200--Sobic010G117100 Sobic010G117200--Sobic010G138400 Sobic010G176700 Sobic010G176700 Sobic010G117200--Sobic010G176700 Sobic006G054900 Sobic006G054900 Sobic010G117200--Sobic006G054900 Sobic002G333900 Sobic002G333900 Sobic010G117200--Sobic002G333900 Sobic009G082700 Sobic009G082700 Sobic010G117200--Sobic009G082700 Sobic009G224800 Sobic009G224800 Sobic010G117200--Sobic009G224800 Sobic006G196200 Sobic006G196200 Sobic010G117200--Sobic006G196200 Sobic002G017600 Sobic002G017600 Sobic010G117200--Sobic002G017600 Sobic005G043000 Sobic005G043000 Sobic002G196100--Sobic005G043000 Sobic010G272300 Sobic010G272300 Sobic002G196100--Sobic010G272300 Sobic002G233100 Sobic002G233100 Sobic002G196100--Sobic002G233100 Sobic003G366600 Sobic003G366600 Sobic002G196100--Sobic003G366600 Sobic010G110800 Sobic010G110800 Sobic002G196100--Sobic010G110800 Sobic004G176600 Sobic004G176600 Sobic002G196100--Sobic004G176600 Sobic002G310600 Sobic002G310600 Sobic002G196100--Sobic002G310600 Sobic009G072900 Sobic009G072900 Sobic002G196100--Sobic009G072900 Sobic005G084600 Sobic005G084600 Sobic002G196100--Sobic005G084600 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600 Sobic001G247900--Sobic008G191600 Sobic001G401300 Sobic001G401300 Sobic001G247900--Sobic001G401300 Sobic001G247900--Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G247900--Sobic001G400800 Sobic001G247900--Sobic002G333900 Sobic003G152100 Sobic003G152100 Sobic001G247900--Sobic003G152100 Sobic001G247900--Sobic009G072900 Sobic001G247900--Sobic006G243600 Sobic001G247900--Sobic001G192200 Sobic010G270500--Sobic003G007600 Sobic010G270500--Sobic007G151300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G270500--Sobic009G111000 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic010G270500--Sobic001G050100
Octagon: transcription factors


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