Gene annotation
Transcriptome id Sobic.010G117200.1
Synonym Sb10g010360
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt A0A194YIJ5
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os11g38220.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009480
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117100 DUF538 domain containing protein, putative, expressed -
2 Sobic.010G138400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
3 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.006G054900 DUF538 domain containing protein, putative, expressed -
5 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
6 Sobic.009G082700 serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.009G224800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.006G196200 expressed protein -
9 Sobic.002G017600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
12 Sobic.010G224200 MYB family transcription factor, putative, expressed -
13 Sobic.002G329100 TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.010G149700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
16 Sobic.003G280900 NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
17 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G276100 expressed protein -
19 Sobic.004G277000 purine permease, putative, expressed -
20 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -


Gene co-expression network
sample Sobic010G117200 Sobic010G117200 Sobic010G117100 Sobic010G117100 Sobic010G117200--Sobic010G117100 Sobic010G138400 Sobic010G138400 Sobic010G117200--Sobic010G138400 Sobic010G176700 Sobic010G176700 Sobic010G117200--Sobic010G176700 Sobic006G054900 Sobic006G054900 Sobic010G117200--Sobic006G054900 Sobic002G333900 Sobic002G333900 Sobic010G117200--Sobic002G333900 Sobic009G082700 Sobic009G082700 Sobic010G117200--Sobic009G082700 Sobic009G224800 Sobic009G224800 Sobic010G117200--Sobic009G224800 Sobic006G196200 Sobic006G196200 Sobic010G117200--Sobic006G196200 Sobic002G017600 Sobic002G017600 Sobic010G117200--Sobic002G017600 Sobic010G117100--Sobic010G117200 Sobic010G117100--Sobic010G138400 Sobic010G117100--Sobic006G054900 Sobic010G117100--Sobic002G017600 Sobic010G117100--Sobic010G176700 Sobic010G117100--Sobic009G224800 Sobic010G117100--Sobic006G196200 Sobic004G181800 Sobic004G181800 Sobic010G117100--Sobic004G181800 Sobic008G092932 Sobic008G092932 Sobic010G117100--Sobic008G092932 Sobic004G159733 Sobic004G159733 Sobic010G138400--Sobic004G159733 Sobic008G191600 Sobic008G191600 Sobic010G138400--Sobic008G191600 Sobic007G151300 Sobic007G151300 Sobic010G138400--Sobic007G151300 Sobic002G257300 Sobic002G257300 Sobic010G138400--Sobic002G257300 Sobic010G138400--Sobic010G117200 Sobic002G196100 Sobic002G196100 Sobic010G138400--Sobic002G196100 Sobic001G050100 Sobic001G050100 Sobic010G138400--Sobic001G050100 Sobic001G247900 Sobic001G247900 Sobic010G138400--Sobic001G247900 Sobic010G270500 Sobic010G270500 Sobic010G138400--Sobic010G270500 Sobic003G061400 Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic002G249000 Sobic002G249000 Sobic010G176700--Sobic002G249000 Sobic009G003900 Sobic009G003900 Sobic010G176700--Sobic009G003900 Sobic001G184000 Sobic001G184000 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic003G442500 Sobic003G442500 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic001G010400 Sobic001G010400 Sobic010G176700--Sobic001G010400 Sobic004G277000 Sobic004G277000 Sobic010G176700--Sobic004G277000 Sobic001G100700 Sobic001G100700 Sobic006G054900--Sobic001G100700 Sobic006G054900--Sobic004G181800 Sobic006G054900--Sobic010G176700 Sobic006G054900--Sobic010G117200 Sobic003G278000 Sobic003G278000 Sobic006G054900--Sobic003G278000 Sobic001G196300 Sobic001G196300 Sobic006G054900--Sobic001G196300 Sobic006G054900--Sobic001G184000 Sobic005G213200 Sobic005G213200 Sobic006G054900--Sobic005G213200 Sobic003G075500 Sobic003G075500 Sobic006G054900--Sobic003G075500 Sobic001G401300 Sobic001G401300 Sobic002G333900--Sobic001G401300 Sobic008G034500 Sobic008G034500 Sobic002G333900--Sobic008G034500 Sobic002G333900--Sobic001G247900 Sobic002G333900--Sobic006G196200 Sobic003G152100 Sobic003G152100 Sobic002G333900--Sobic003G152100 Sobic001G466000 Sobic001G466000 Sobic002G333900--Sobic001G466000 Sobic001G400700 Sobic001G400700 Sobic002G333900--Sobic001G400700 Sobic002G328300 Sobic002G328300 Sobic002G333900--Sobic002G328300 Sobic001G401200 Sobic001G401200 Sobic002G333900--Sobic001G401200 Sobic009G082700--Sobic001G466000 Sobic004G276100 Sobic004G276100 Sobic009G082700--Sobic004G276100 Sobic007G078100 Sobic007G078100 Sobic009G082700--Sobic007G078100 Sobic009G143400 Sobic009G143400 Sobic009G082700--Sobic009G143400 Sobic009G082700--Sobic002G249000 Sobic007G198100 Sobic007G198100 Sobic009G082700--Sobic007G198100 Sobic009G254900 Sobic009G254900 Sobic009G082700--Sobic009G254900 Sobic009G082700--Sobic001G010400 Sobic001G026900 Sobic001G026900 Sobic009G082700--Sobic001G026900 Sobic009G224800--Sobic005G213200 Sobic009G224800--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic009G224800--Sobic009G120000 Sobic003G129000 Sobic003G129000 Sobic009G224800--Sobic003G129000 Sobic010G071900 Sobic010G071900 Sobic009G224800--Sobic010G071900 Sobic001G243600 Sobic001G243600 Sobic009G224800--Sobic001G243600 Sobic006G199100 Sobic006G199100 Sobic009G224800--Sobic006G199100 Sobic002G421800 Sobic002G421800 Sobic009G224800--Sobic002G421800 Sobic006G012900 Sobic006G012900 Sobic009G224800--Sobic006G012900 Sobic006G196200--Sobic002G333900 Sobic006G196200--Sobic008G034500 Sobic006G196200--Sobic001G401300 Sobic006G196200--Sobic002G249000 Sobic006G196200--Sobic002G328300 Sobic006G196200--Sobic004G276100 Sobic006G196200--Sobic010G176700 Sobic003G215800 Sobic003G215800 Sobic006G196200--Sobic003G215800 Sobic007G009100 Sobic007G009100 Sobic006G196200--Sobic007G009100 Sobic002G017600--Sobic009G082700 Sobic004G311000 Sobic004G311000 Sobic002G017600--Sobic004G311000 Sobic003G229200 Sobic003G229200 Sobic002G017600--Sobic003G229200 Sobic002G017600--Sobic007G078100 Sobic009G032800 Sobic009G032800 Sobic002G017600--Sobic009G032800 Sobic007G098400 Sobic007G098400 Sobic002G017600--Sobic007G098400 Sobic002G017600--Sobic001G010400 Sobic002G017600--Sobic001G247900 Sobic002G017600--Sobic010G117200
Octagon: transcription factors


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