Gene annotation
Transcriptome id Sobic.002G017600.2
Synonym Sb02g001680
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0W1T8
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a045636 , Zm00025a044933 , Zm00025a044928
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G082700 serine/threonine-protein kinase receptor precursor, putative, expressed -
2 Sobic.004G311000 integral membrane protein DUF6 containing protein, expressed -
3 Sobic.003G229200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed K07424: cytochrome P450 family 3 subfamily A
4 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
5 Sobic.009G032800 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
8 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
9 Sobic.010G117200 DUF538 domain containing protein, putative, expressed -
10 Sobic.009G210300 similar to Calcium sensing protein(PubMedID : 29862293)@Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
11 Sobic.009G161401 - -
12 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
13 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
15 Sobic.002G224400 D-mannose binding lectin family protein, expressed -
16 Sobic.010G062100 expressed protein -
17 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
18 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
19 Sobic.002G361001 - -
20 Sobic.010G070000 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1


Gene co-expression network
sample Sobic002G017600 Sobic002G017600 Sobic009G082700 Sobic009G082700 Sobic002G017600--Sobic009G082700 Sobic004G311000 Sobic004G311000 Sobic002G017600--Sobic004G311000 Sobic003G229200 Sobic003G229200 Sobic002G017600--Sobic003G229200 Sobic007G078100 Sobic007G078100 Sobic002G017600--Sobic007G078100 Sobic009G032800 Sobic009G032800 Sobic002G017600--Sobic009G032800 Sobic007G098400 Sobic007G098400 Sobic002G017600--Sobic007G098400 Sobic001G010400 Sobic001G010400 Sobic002G017600--Sobic001G010400 Sobic001G247900 Sobic001G247900 Sobic002G017600--Sobic001G247900 Sobic010G117200 Sobic010G117200 Sobic002G017600--Sobic010G117200 Sobic001G466000 Sobic001G466000 Sobic009G082700--Sobic001G466000 Sobic004G276100 Sobic004G276100 Sobic009G082700--Sobic004G276100 Sobic009G082700--Sobic007G078100 Sobic009G143400 Sobic009G143400 Sobic009G082700--Sobic009G143400 Sobic002G249000 Sobic002G249000 Sobic009G082700--Sobic002G249000 Sobic007G198100 Sobic007G198100 Sobic009G082700--Sobic007G198100 Sobic009G254900 Sobic009G254900 Sobic009G082700--Sobic009G254900 Sobic009G082700--Sobic001G010400 Sobic001G026900 Sobic001G026900 Sobic009G082700--Sobic001G026900 Sobic009G073800 Sobic009G073800 Sobic004G311000--Sobic009G073800 Sobic009G161401 Sobic009G161401 Sobic004G311000--Sobic009G161401 Sobic004G311000--Sobic003G229200 Sobic001G302500 Sobic001G302500 Sobic004G311000--Sobic001G302500 Sobic004G311000--Sobic002G017600 Sobic004G311000--Sobic007G078100 Sobic002G257300 Sobic002G257300 Sobic004G311000--Sobic002G257300 Sobic002G185800 Sobic002G185800 Sobic004G311000--Sobic002G185800 Sobic010G220600 Sobic010G220600 Sobic004G311000--Sobic010G220600 Sobic003G229200--Sobic009G161401 Sobic003G229200--Sobic001G302500 Sobic006G096400 Sobic006G096400 Sobic003G229200--Sobic006G096400 Sobic002G024100 Sobic002G024100 Sobic003G229200--Sobic002G024100 Sobic003G273700 Sobic003G273700 Sobic003G229200--Sobic003G273700 Sobic003G080900 Sobic003G080900 Sobic003G229200--Sobic003G080900 Sobic004G347300 Sobic004G347300 Sobic003G229200--Sobic004G347300 Sobic003G229200--Sobic007G078100 Sobic005G152200 Sobic005G152200 Sobic003G229200--Sobic005G152200 Sobic007G078100--Sobic004G276100 Sobic007G078100--Sobic002G257300 Sobic007G161400 Sobic007G161400 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic004G051700 Sobic004G051700 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic006G127900 Sobic006G127900 Sobic009G032800--Sobic006G127900 Sobic006G092500 Sobic006G092500 Sobic009G032800--Sobic006G092500 Sobic001G476500 Sobic001G476500 Sobic009G032800--Sobic001G476500 Sobic009G061200 Sobic009G061200 Sobic009G032800--Sobic009G061200 Sobic001G190200 Sobic001G190200 Sobic009G032800--Sobic001G190200 Sobic003G033900 Sobic003G033900 Sobic009G032800--Sobic003G033900 Sobic001G487300 Sobic001G487300 Sobic009G032800--Sobic001G487300 Sobic004G216600 Sobic004G216600 Sobic009G032800--Sobic004G216600 Sobic008G186100 Sobic008G186100 Sobic009G032800--Sobic008G186100 Sobic002G242500 Sobic002G242500 Sobic007G098400--Sobic002G242500 Sobic005G211400 Sobic005G211400 Sobic007G098400--Sobic005G211400 Sobic009G241700 Sobic009G241700 Sobic007G098400--Sobic009G241700 Sobic007G098400--Sobic001G010400 Sobic001G049200 Sobic001G049200 Sobic007G098400--Sobic001G049200 Sobic001G380400 Sobic001G380400 Sobic007G098400--Sobic001G380400 Sobic001G090000 Sobic001G090000 Sobic007G098400--Sobic001G090000 Sobic007G098400--Sobic003G273700 Sobic002G294200 Sobic002G294200 Sobic007G098400--Sobic002G294200 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic010G016400 Sobic010G016400 Sobic001G010400--Sobic010G016400 Sobic008G191600 Sobic008G191600 Sobic001G247900--Sobic008G191600 Sobic001G401300 Sobic001G401300 Sobic001G247900--Sobic001G401300 Sobic001G400700 Sobic001G400700 Sobic001G247900--Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G247900--Sobic001G400800 Sobic002G333900 Sobic002G333900 Sobic001G247900--Sobic002G333900 Sobic003G152100 Sobic003G152100 Sobic001G247900--Sobic003G152100 Sobic009G072900 Sobic009G072900 Sobic001G247900--Sobic009G072900 Sobic006G243600 Sobic006G243600 Sobic001G247900--Sobic006G243600 Sobic001G192200 Sobic001G192200 Sobic001G247900--Sobic001G192200 Sobic010G117100 Sobic010G117100 Sobic010G117200--Sobic010G117100 Sobic010G138400 Sobic010G138400 Sobic010G117200--Sobic010G138400 Sobic010G176700 Sobic010G176700 Sobic010G117200--Sobic010G176700 Sobic006G054900 Sobic006G054900 Sobic010G117200--Sobic006G054900 Sobic010G117200--Sobic002G333900 Sobic010G117200--Sobic009G082700 Sobic009G224800 Sobic009G224800 Sobic010G117200--Sobic009G224800 Sobic006G196200 Sobic006G196200 Sobic010G117200--Sobic006G196200 Sobic010G117200--Sobic002G017600
Octagon: transcription factors


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