Gene annotation
Transcriptome id Sobic.002G224400.1
Synonym Sb02g026520
Functional annotation D-mannose binding lectin family protein, expressed
UniProt C5X2A2
Pfam PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF105
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G35370 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os09g28180.1 : D-mannose binding lectin family protein, expressed
MaizeGDB (Corn) Zm00025a038766 , Zm00025a047236 , Zm00025a022232
Brachypodium KQJ90504 , KQK17558 , PNT62041 , KQK22464 , PNT69563 , KQJ85553
Barley HORVU1Hr1G064680.2 , HORVU1Hr1G064680.1 , HORVU5Hr1G000240.5 , HORVU5Hr1G000240.4 , HORVU5Hr1G000240.3 , HORVU5Hr1G000240.2 , HORVU6Hr1G080460.1 , HORVU5Hr1G068070.1 , HORVU5Hr1G068070.2
Wheat TraesCS2D02G505200
Populus -


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cDNA sequences
Sobic.002G224400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G009500 - -
2 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
3 Sobic.003G379800 armadillo/beta-catenin repeat family protein, putative, expressed -
4 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
5 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
6 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.003G343900 expressed protein -
8 Sobic.004G075000 expressed protein -
9 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.004G225900 GEM, putative, expressed -
11 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G262200 DNA binding protein, putative, expressed -
14 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
15 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
16 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
17 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
19 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
20 Sobic.006G249300 expressed protein -


Gene co-expression network
sample Sobic002G224400 Sobic002G224400 Sobic001G009500 Sobic001G009500 Sobic002G224400--Sobic001G009500 Sobic009G143400 Sobic009G143400 Sobic002G224400--Sobic009G143400 Sobic003G379800 Sobic003G379800 Sobic002G224400--Sobic003G379800 Sobic001G389000 Sobic001G389000 Sobic002G224400--Sobic001G389000 Sobic003G417200 Sobic003G417200 Sobic002G224400--Sobic003G417200 Sobic008G186100 Sobic008G186100 Sobic002G224400--Sobic008G186100 Sobic003G343900 Sobic003G343900 Sobic002G224400--Sobic003G343900 Sobic004G075000 Sobic004G075000 Sobic002G224400--Sobic004G075000 Sobic002G329000 Sobic002G329000 Sobic002G224400--Sobic002G329000 Sobic001G247600 Sobic001G247600 Sobic001G009500--Sobic001G247600 Sobic008G106700 Sobic008G106700 Sobic001G009500--Sobic008G106700 Sobic001G009500--Sobic003G343900 Sobic001G009500--Sobic001G389000 Sobic009G074100 Sobic009G074100 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic001G009500--Sobic004G075000 Sobic001G009500--Sobic008G186100 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700 Sobic003G379800--Sobic009G143400 Sobic003G379800--Sobic004G061200 Sobic003G379800--Sobic003G393700 Sobic004G069200 Sobic004G069200 Sobic003G379800--Sobic004G069200 Sobic003G379800--Sobic001G389000 Sobic003G379800--Sobic010G086200 Sobic001G070800 Sobic001G070800 Sobic003G379800--Sobic001G070800 Sobic002G393000 Sobic002G393000 Sobic003G379800--Sobic002G393000 Sobic009G159200 Sobic009G159200 Sobic003G379800--Sobic009G159200 Sobic009G159400 Sobic009G159400 Sobic001G389000--Sobic009G159400 Sobic003G037800 Sobic003G037800 Sobic001G389000--Sobic003G037800 Sobic004G101300 Sobic004G101300 Sobic001G389000--Sobic004G101300 Sobic004G340900 Sobic004G340900 Sobic001G389000--Sobic004G340900 Sobic010G259600 Sobic010G259600 Sobic001G389000--Sobic010G259600 Sobic006G092500 Sobic006G092500 Sobic001G389000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic001G389000--Sobic001G139100 Sobic001G038900 Sobic001G038900 Sobic001G389000--Sobic001G038900 Sobic003G429000 Sobic003G429000 Sobic001G389000--Sobic003G429000 Sobic009G111000 Sobic009G111000 Sobic003G417200--Sobic009G111000 Sobic003G319500 Sobic003G319500 Sobic003G417200--Sobic003G319500 Sobic001G304100 Sobic001G304100 Sobic003G417200--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic003G417200--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G417200--Sobic001G500000 Sobic003G432700 Sobic003G432700 Sobic003G417200--Sobic003G432700 Sobic003G084400 Sobic003G084400 Sobic003G417200--Sobic003G084400 Sobic002G176100 Sobic002G176100 Sobic003G417200--Sobic002G176100 Sobic003G417200--Sobic008G186100 Sobic008G186100--Sobic005G011300 Sobic002G287100 Sobic002G287100 Sobic008G186100--Sobic002G287100 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic008G186100--Sobic001G139100 Sobic002G250000 Sobic002G250000 Sobic008G186100--Sobic002G250000 Sobic008G186100--Sobic006G092500 Sobic001G494000 Sobic001G494000 Sobic003G343900--Sobic001G494000 Sobic003G343900--Sobic001G009500 Sobic010G252500 Sobic010G252500 Sobic003G343900--Sobic010G252500 Sobic003G343900--Sobic001G389000 Sobic003G343900--Sobic008G106700 Sobic009G179900 Sobic009G179900 Sobic003G343900--Sobic009G179900 Sobic005G093000 Sobic005G093000 Sobic003G343900--Sobic005G093000 Sobic003G343900--Sobic003G429000 Sobic003G417350 Sobic003G417350 Sobic003G343900--Sobic003G417350 Sobic007G155000 Sobic007G155000 Sobic004G075000--Sobic007G155000 Sobic004G075000--Sobic002G393000 Sobic004G075000--Sobic001G038900 Sobic003G364600 Sobic003G364600 Sobic004G075000--Sobic003G364600 Sobic004G075000--Sobic004G061200 Sobic004G075000--Sobic009G159400 Sobic001G477600 Sobic001G477600 Sobic004G075000--Sobic001G477600 Sobic006G143400 Sobic006G143400 Sobic004G075000--Sobic006G143400 Sobic004G075000--Sobic003G393700 Sobic002G329000--Sobic005G093000 Sobic002G329000--Sobic003G429000 Sobic010G268400 Sobic010G268400 Sobic002G329000--Sobic010G268400 Sobic002G329000--Sobic001G389000 Sobic002G329000--Sobic007G155000 Sobic002G329000--Sobic003G417350 Sobic002G329000--Sobic003G037800 Sobic001G050100 Sobic001G050100 Sobic002G329000--Sobic001G050100 Sobic010G195500 Sobic010G195500 Sobic002G329000--Sobic010G195500
Octagon: transcription factors


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