Gene annotation
Transcriptome id Sobic.002G361001.1
Synonym -
Functional annotation -
UniProt A0A1W0W788
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G066000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G082400 cytochrome P450, putative, expressed -
3 Sobic.001G319500 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
5 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
7 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
8 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.005G137200 only inducible by pathogen inoculation(PubMedID : 20529887)@Chalcone synthase 7 (Os)(PubMedID : 27208977)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
11 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
13 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
15 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.002G282400 expressed protein -
17 Sobic.005G103900 - -
18 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
19 Sobic.004G304400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic002G361001 Sobic002G361001 Sobic001G066000 Sobic001G066000 Sobic002G361001--Sobic001G066000 Sobic001G082400 Sobic001G082400 Sobic002G361001--Sobic001G082400 Sobic001G319500 Sobic001G319500 Sobic002G361001--Sobic001G319500 Sobic009G143400 Sobic009G143400 Sobic002G361001--Sobic009G143400 Sobic009G043600 Sobic009G043600 Sobic002G361001--Sobic009G043600 Sobic003G349600 Sobic003G349600 Sobic002G361001--Sobic003G349600 Sobic008G034500 Sobic008G034500 Sobic002G361001--Sobic008G034500 Sobic004G050000 Sobic004G050000 Sobic002G361001--Sobic004G050000 Sobic001G466000 Sobic001G466000 Sobic002G361001--Sobic001G466000 Sobic001G066000--Sobic009G043600 Sobic001G066000--Sobic004G050000 Sobic006G218300 Sobic006G218300 Sobic001G066000--Sobic006G218300 Sobic006G121500 Sobic006G121500 Sobic001G066000--Sobic006G121500 Sobic003G322900 Sobic003G322900 Sobic001G066000--Sobic003G322900 Sobic004G277000 Sobic004G277000 Sobic001G066000--Sobic004G277000 Sobic001G066000--Sobic001G319500 Sobic002G055600 Sobic002G055600 Sobic001G066000--Sobic002G055600 Sobic002G249000 Sobic002G249000 Sobic001G066000--Sobic002G249000 Sobic001G056700 Sobic001G056700 Sobic001G082400--Sobic001G056700 Sobic001G071100 Sobic001G071100 Sobic001G082400--Sobic001G071100 Sobic006G191600 Sobic006G191600 Sobic001G082400--Sobic006G191600 Sobic002G291300 Sobic002G291300 Sobic001G082400--Sobic002G291300 Sobic001G082400--Sobic002G361001 Sobic002G282400 Sobic002G282400 Sobic001G082400--Sobic002G282400 Sobic007G126100 Sobic007G126100 Sobic001G082400--Sobic007G126100 Sobic004G164500 Sobic004G164500 Sobic001G082400--Sobic004G164500 Sobic001G223100 Sobic001G223100 Sobic001G082400--Sobic001G223100 Sobic006G173900 Sobic006G173900 Sobic001G319500--Sobic006G173900 Sobic001G319600 Sobic001G319600 Sobic001G319500--Sobic001G319600 Sobic005G101800 Sobic005G101800 Sobic001G319500--Sobic005G101800 Sobic010G099900 Sobic010G099900 Sobic001G319500--Sobic010G099900 Sobic010G117900 Sobic010G117900 Sobic001G319500--Sobic010G117900 Sobic002G393000 Sobic002G393000 Sobic001G319500--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic001G319500--Sobic008G136400 Sobic001G400700 Sobic001G400700 Sobic001G319500--Sobic001G400700 Sobic002G183200 Sobic002G183200 Sobic001G319500--Sobic002G183200 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700 Sobic009G043600--Sobic004G050000 Sobic009G043600--Sobic001G066000 Sobic009G043600--Sobic004G277000 Sobic009G043600--Sobic006G121500 Sobic006G199100 Sobic006G199100 Sobic009G043600--Sobic006G199100 Sobic006G108400 Sobic006G108400 Sobic009G043600--Sobic006G108400 Sobic004G276100 Sobic004G276100 Sobic009G043600--Sobic004G276100 Sobic002G267500 Sobic002G267500 Sobic009G043600--Sobic002G267500 Sobic009G043600--Sobic001G400700 Sobic004G243100 Sobic004G243100 Sobic003G349600--Sobic004G243100 Sobic009G224100 Sobic009G224100 Sobic003G349600--Sobic009G224100 Sobic001G330100 Sobic001G330100 Sobic003G349600--Sobic001G330100 Sobic007G155200 Sobic007G155200 Sobic003G349600--Sobic007G155200 Sobic002G140400 Sobic002G140400 Sobic003G349600--Sobic002G140400 Sobic008G187001 Sobic008G187001 Sobic003G349600--Sobic008G187001 Sobic007G036900 Sobic007G036900 Sobic003G349600--Sobic007G036900 Sobic002G139400 Sobic002G139400 Sobic003G349600--Sobic002G139400 Sobic002G263400 Sobic002G263400 Sobic003G349600--Sobic002G263400 Sobic001G401300 Sobic001G401300 Sobic008G034500--Sobic001G401300 Sobic003G152100 Sobic003G152100 Sobic008G034500--Sobic003G152100 Sobic002G367400 Sobic002G367400 Sobic008G034500--Sobic002G367400 Sobic002G333900 Sobic002G333900 Sobic008G034500--Sobic002G333900 Sobic008G034500--Sobic001G400700 Sobic008G034500--Sobic001G466000 Sobic002G328300 Sobic002G328300 Sobic008G034500--Sobic002G328300 Sobic008G034500--Sobic003G349600 Sobic008G034500--Sobic009G143400 Sobic004G050000--Sobic009G043600 Sobic004G050000--Sobic001G066000 Sobic004G049900 Sobic004G049900 Sobic004G050000--Sobic004G049900 Sobic004G050000--Sobic004G277000 Sobic004G050000--Sobic002G267500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic009G177800 Sobic009G177800 Sobic004G050000--Sobic009G177800 Sobic004G050000--Sobic006G108400 Sobic001G466000--Sobic002G367400 Sobic001G466000--Sobic003G349600 Sobic009G254900 Sobic009G254900 Sobic001G466000--Sobic009G254900 Sobic001G466000--Sobic009G143400 Sobic005G063100 Sobic005G063100 Sobic001G466000--Sobic005G063100 Sobic009G234100 Sobic009G234100 Sobic001G466000--Sobic009G234100 Sobic002G336600 Sobic002G336600 Sobic001G466000--Sobic002G336600 Sobic001G466000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic001G466000--Sobic003G116800
Octagon: transcription factors


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