Gene annotation
Transcriptome id Sobic.001G319500.1
Synonym ATGSTU17, Glutathione-S-transferase, GST30B, GST30, ERD9, Sb01g031030
Functional annotation Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress (PubMedID : 26645959)
glutathione S-transferase, putative, expressed
UniProt C5WUK1
Pfam PF00043 PF13417
Panther DB PTHR11260 PTHR11260:SF214
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10370 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os10g38140.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a003098 , Zm00025a000502
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
2 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
4 Sobic.010G099900 expressed protein -
5 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
7 Sobic.008G136400 expressed protein -
8 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
10 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
13 Sobic.010G176600 - -
14 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
15 Sobic.006G275200 CHCH domain containing protein, expressed -
16 Sobic.004G088551 - -
17 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
18 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.001G423800 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G319500 Sobic001G319500 Sobic006G173900 Sobic006G173900 Sobic001G319500--Sobic006G173900 Sobic001G319600 Sobic001G319600 Sobic001G319500--Sobic001G319600 Sobic005G101800 Sobic005G101800 Sobic001G319500--Sobic005G101800 Sobic010G099900 Sobic010G099900 Sobic001G319500--Sobic010G099900 Sobic010G117900 Sobic010G117900 Sobic001G319500--Sobic010G117900 Sobic002G393000 Sobic002G393000 Sobic001G319500--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic001G319500--Sobic008G136400 Sobic001G400700 Sobic001G400700 Sobic001G319500--Sobic001G400700 Sobic002G183200 Sobic002G183200 Sobic001G319500--Sobic002G183200 Sobic009G008900 Sobic009G008900 Sobic006G173900--Sobic009G008900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic006G173900--Sobic002G414600 Sobic001G119400 Sobic001G119400 Sobic006G173900--Sobic001G119400 Sobic001G423800 Sobic001G423800 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic004G216600 Sobic004G216600 Sobic001G319600--Sobic004G216600 Sobic002G361100 Sobic002G361100 Sobic001G319600--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic001G319600--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic001G319600--Sobic010G084700 Sobic001G319600--Sobic006G275200 Sobic009G061200 Sobic009G061200 Sobic001G319600--Sobic009G061200 Sobic002G261000 Sobic002G261000 Sobic001G319600--Sobic002G261000 Sobic001G319600--Sobic006G173900 Sobic001G231600 Sobic001G231600 Sobic001G319600--Sobic001G231600 Sobic010G084400 Sobic010G084400 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic003G252800 Sobic003G252800 Sobic005G101800--Sobic003G252800 Sobic007G227300 Sobic007G227300 Sobic005G101800--Sobic007G227300 Sobic001G317200 Sobic001G317200 Sobic005G101800--Sobic001G317200 Sobic003G426300 Sobic003G426300 Sobic005G101800--Sobic003G426300 Sobic006G099900 Sobic006G099900 Sobic005G101800--Sobic006G099900 Sobic009G128700 Sobic009G128700 Sobic005G101800--Sobic009G128700 Sobic001G400800 Sobic001G400800 Sobic005G101800--Sobic001G400800 Sobic010G099900--Sobic006G173900 Sobic010G099900--Sobic002G393000 Sobic010G099900--Sobic006G275200 Sobic010G099900--Sobic009G008900 Sobic010G099900--Sobic001G119400 Sobic006G127900 Sobic006G127900 Sobic010G099900--Sobic006G127900 Sobic010G099900--Sobic008G136400 Sobic010G099900--Sobic002G414600 Sobic010G099900--Sobic004G216600 Sobic010G117900--Sobic005G101800 Sobic010G117900--Sobic003G252800 Sobic010G117900--Sobic010G084700 Sobic010G117900--Sobic007G227300 Sobic004G221500 Sobic004G221500 Sobic010G117900--Sobic004G221500 Sobic010G117900--Sobic010G084400 Sobic010G117900--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic010G117900--Sobic002G195400 Sobic001G348700 Sobic001G348700 Sobic010G117900--Sobic001G348700 Sobic002G393000--Sobic001G119400 Sobic002G393000--Sobic006G275200 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic002G393000--Sobic010G099900 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic002G140400 Sobic002G140400 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic001G400700--Sobic001G400800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic001G400700--Sobic003G252800 Sobic001G400700--Sobic002G183200 Sobic001G400700--Sobic006G099900 Sobic002G183200--Sobic003G286600 Sobic005G091500 Sobic005G091500 Sobic002G183200--Sobic005G091500 Sobic002G183200--Sobic004G189400 Sobic001G025300 Sobic001G025300 Sobic002G183200--Sobic001G025300 Sobic001G119100 Sobic001G119100 Sobic002G183200--Sobic001G119100 Sobic002G183200--Sobic010G176600 Sobic002G183200--Sobic006G099900 Sobic002G183200--Sobic001G317200 Sobic002G183200--Sobic010G084400
Octagon: transcription factors


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