Gene annotation
Transcriptome id Sobic.003G251600.1
Synonym Sb03g030730
Functional annotation S-locus-like receptor protein kinase, putative, expressed
UniProt A0A1W0VYV0
Pfam PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF22
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34300 : lectin protein kinase family protein
RAP-DB (Rice) LOC_Os01g48000.1 : S-locus-like receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a047236 , Zm00025a043423 , Zm00025a038766 , Zm00025a038765 , Zm00025a051128 , Zm00025a025879
Brachypodium PNT62041 , KQJ90504 , PNT69563 , KQJ85553 , PNT72556
Barley HORVU1Hr1G064680.2 , HORVU1Hr1G064680.1 , HORVU5Hr1G000240.5 , HORVU5Hr1G000240.4 , HORVU5Hr1G000240.3 , HORVU5Hr1G000240.2 , HORVU6Hr1G080460.1
Wheat TraesCS1D02G360300 , TraesCS2D02G505200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
2 Sobic.007G151300 Cupin domain containing protein, expressed -
3 Sobic.002G327201 - -
4 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
5 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
6 Sobic.010G029700 tentative name(PubMedID : 31536532)@oxidoreductase, putative, expressed -
7 Sobic.001G147900 cytochrome P450, putative, expressed -
8 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.001G050100 Cupin domain containing protein, expressed -
10 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
12 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
13 Sobic.006G157900 C2 domain containing protein, putative, expressed -
14 Sobic.003G192100 expressed protein -
15 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.010G195500 reductase, putative, expressed -
17 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.010G212800 expressed protein -
19 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.010G239500 ubiquitin family protein, putative, expressed K08770: ubiquitin C


Gene co-expression network
sample Sobic003G251600 Sobic003G251600 Sobic008G191600 Sobic008G191600 Sobic003G251600--Sobic008G191600 Sobic007G151300 Sobic007G151300 Sobic003G251600--Sobic007G151300 Sobic002G327201 Sobic002G327201 Sobic003G251600--Sobic002G327201 Sobic001G049900 Sobic001G049900 Sobic003G251600--Sobic001G049900 Sobic010G184800 Sobic010G184800 Sobic003G251600--Sobic010G184800 Sobic010G029700 Sobic010G029700 Sobic003G251600--Sobic010G029700 Sobic001G147900 Sobic001G147900 Sobic003G251600--Sobic001G147900 Sobic008G186100 Sobic008G186100 Sobic003G251600--Sobic008G186100 Sobic001G050100 Sobic001G050100 Sobic003G251600--Sobic001G050100 Sobic008G191600--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic008G191600--Sobic003G192100 Sobic008G032100 Sobic008G032100 Sobic008G191600--Sobic008G032100 Sobic002G312900 Sobic002G312900 Sobic008G191600--Sobic002G312900 Sobic001G400700 Sobic001G400700 Sobic008G191600--Sobic001G400700 Sobic001G247900 Sobic001G247900 Sobic008G191600--Sobic001G247900 Sobic008G191600--Sobic007G151300 Sobic004G101300 Sobic004G101300 Sobic008G191600--Sobic004G101300 Sobic010G270500 Sobic010G270500 Sobic008G191600--Sobic010G270500 Sobic007G151300--Sobic010G270500 Sobic002G247600 Sobic002G247600 Sobic007G151300--Sobic002G247600 Sobic010G185000 Sobic010G185000 Sobic007G151300--Sobic010G185000 Sobic003G007600 Sobic003G007600 Sobic007G151300--Sobic003G007600 Sobic006G243600 Sobic006G243600 Sobic007G151300--Sobic006G243600 Sobic007G151300--Sobic001G050100 Sobic004G159733 Sobic004G159733 Sobic007G151300--Sobic004G159733 Sobic002G017800 Sobic002G017800 Sobic007G151300--Sobic002G017800 Sobic001G462700 Sobic001G462700 Sobic007G151300--Sobic001G462700 Sobic002G234400 Sobic002G234400 Sobic002G327201--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G327201--Sobic001G397300 Sobic002G250000 Sobic002G250000 Sobic002G327201--Sobic002G250000 Sobic007G006300 Sobic007G006300 Sobic002G327201--Sobic007G006300 Sobic001G487500 Sobic001G487500 Sobic002G327201--Sobic001G487500 Sobic002G327201--Sobic010G029700 Sobic001G190100 Sobic001G190100 Sobic002G327201--Sobic001G190100 Sobic002G327400 Sobic002G327400 Sobic002G327201--Sobic002G327400 Sobic004G086400 Sobic004G086400 Sobic002G327201--Sobic004G086400 Sobic003G311800 Sobic003G311800 Sobic001G049900--Sobic003G311800 Sobic002G003800 Sobic002G003800 Sobic001G049900--Sobic002G003800 Sobic001G049900--Sobic010G184800 Sobic009G109000 Sobic009G109000 Sobic001G049900--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic001G049900--Sobic001G430100 Sobic006G197100 Sobic006G197100 Sobic001G049900--Sobic006G197100 Sobic008G055100 Sobic008G055100 Sobic001G049900--Sobic008G055100 Sobic004G042000 Sobic004G042000 Sobic001G049900--Sobic004G042000 Sobic004G310200 Sobic004G310200 Sobic001G049900--Sobic004G310200 Sobic001G304100 Sobic001G304100 Sobic010G184800--Sobic001G304100 Sobic009G111000 Sobic009G111000 Sobic010G184800--Sobic009G111000 Sobic010G184800--Sobic001G049900 Sobic010G184800--Sobic010G029700 Sobic010G184800--Sobic008G186100 Sobic001G231700 Sobic001G231700 Sobic010G184800--Sobic001G231700 Sobic002G176100 Sobic002G176100 Sobic010G184800--Sobic002G176100 Sobic004G046200 Sobic004G046200 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic010G029700--Sobic008G186100 Sobic010G029700--Sobic002G250000 Sobic010G029700--Sobic010G184800 Sobic002G287100 Sobic002G287100 Sobic010G029700--Sobic002G287100 Sobic003G417200 Sobic003G417200 Sobic010G029700--Sobic003G417200 Sobic010G029700--Sobic002G176100 Sobic010G029700--Sobic002G003800 Sobic010G029700--Sobic001G049900 Sobic010G029700--Sobic001G304100 Sobic003G368600 Sobic003G368600 Sobic001G147900--Sobic003G368600 Sobic001G147900--Sobic006G197100 Sobic003G404600 Sobic003G404600 Sobic001G147900--Sobic003G404600 Sobic001G147900--Sobic006G243600 Sobic001G147900--Sobic002G003800 Sobic003G152200 Sobic003G152200 Sobic001G147900--Sobic003G152200 Sobic006G256900 Sobic006G256900 Sobic001G147900--Sobic006G256900 Sobic004G348400 Sobic004G348400 Sobic001G147900--Sobic004G348400 Sobic006G059700 Sobic006G059700 Sobic001G147900--Sobic006G059700 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic008G186100--Sobic001G139100 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic005G018700 Sobic005G018700 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic006G103000 Sobic006G103000 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600
Octagon: transcription factors


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