Gene annotation
Transcriptome id Sobic.003G206900.1
Synonym Sb03g026840
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XPM6
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF841
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24420 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g41240.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028607
Brachypodium KQK08567
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.003G240600 VQ domain containing protein, putative, expressed -
3 Sobic.010G019900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G304100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
6 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
7 Sobic.005G092900 - -
8 Sobic.004G107700 expressed protein -
9 Sobic.007G148000 heat shock protein DnaJ, putative, expressed -
10 Sobic.002G261000 expressed protein -
11 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -
14 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
16 Sobic.007G025500 amino acid transporter, putative, expressed -
17 Sobic.001G243600 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.003G087300 nuclease PA3, putative, expressed -
20 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase


Gene co-expression network
sample Sobic003G206900 Sobic003G206900 Sobic010G071900 Sobic010G071900 Sobic003G206900--Sobic010G071900 Sobic003G240600 Sobic003G240600 Sobic003G206900--Sobic003G240600 Sobic010G019900 Sobic010G019900 Sobic003G206900--Sobic010G019900 Sobic005G038900 Sobic005G038900 Sobic003G206900--Sobic005G038900 Sobic004G304100 Sobic004G304100 Sobic003G206900--Sobic004G304100 Sobic010G185500 Sobic010G185500 Sobic003G206900--Sobic010G185500 Sobic005G092900 Sobic005G092900 Sobic003G206900--Sobic005G092900 Sobic004G107700 Sobic004G107700 Sobic003G206900--Sobic004G107700 Sobic007G148000 Sobic007G148000 Sobic003G206900--Sobic007G148000 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic001G317200 Sobic001G317200 Sobic003G240600--Sobic001G317200 Sobic001G325000 Sobic001G325000 Sobic003G240600--Sobic001G325000 Sobic006G084600 Sobic006G084600 Sobic003G240600--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic003G240600--Sobic001G348700 Sobic004G216600 Sobic004G216600 Sobic003G240600--Sobic004G216600 Sobic003G252800 Sobic003G252800 Sobic003G240600--Sobic003G252800 Sobic003G317100 Sobic003G317100 Sobic003G240600--Sobic003G317100 Sobic002G414600 Sobic002G414600 Sobic003G240600--Sobic002G414600 Sobic003G437200 Sobic003G437200 Sobic003G240600--Sobic003G437200 Sobic010G099900 Sobic010G099900 Sobic010G019900--Sobic010G099900 Sobic002G261000 Sobic002G261000 Sobic010G019900--Sobic002G261000 Sobic001G119400 Sobic001G119400 Sobic010G019900--Sobic001G119400 Sobic010G009300 Sobic010G009300 Sobic010G019900--Sobic010G009300 Sobic001G499300 Sobic001G499300 Sobic010G019900--Sobic001G499300 Sobic001G177800 Sobic001G177800 Sobic010G019900--Sobic001G177800 Sobic010G117900 Sobic010G117900 Sobic010G019900--Sobic010G117900 Sobic002G187500 Sobic002G187500 Sobic010G019900--Sobic002G187500 Sobic006G173900 Sobic006G173900 Sobic010G019900--Sobic006G173900 Sobic003G362100 Sobic003G362100 Sobic005G038900--Sobic003G362100 Sobic007G025500 Sobic007G025500 Sobic005G038900--Sobic007G025500 Sobic004G088551 Sobic004G088551 Sobic005G038900--Sobic004G088551 Sobic005G038900--Sobic004G216600 Sobic005G038900--Sobic006G173900 Sobic008G032100 Sobic008G032100 Sobic005G038900--Sobic008G032100 Sobic007G145600 Sobic007G145600 Sobic005G038900--Sobic007G145600 Sobic005G038900--Sobic010G009300 Sobic005G038900--Sobic010G071900 Sobic004G304300 Sobic004G304300 Sobic004G304100--Sobic004G304300 Sobic007G066932 Sobic007G066932 Sobic004G304100--Sobic007G066932 Sobic003G426100 Sobic003G426100 Sobic004G304100--Sobic003G426100 Sobic002G195400 Sobic002G195400 Sobic004G304100--Sobic002G195400 Sobic003G164800 Sobic003G164800 Sobic004G304100--Sobic003G164800 Sobic005G101800 Sobic005G101800 Sobic004G304100--Sobic005G101800 Sobic003G425850 Sobic003G425850 Sobic004G304100--Sobic003G425850 Sobic004G304100--Sobic001G319500 Sobic004G304100--Sobic004G088551 Sobic008G033600 Sobic008G033600 Sobic010G185500--Sobic008G033600 Sobic010G185500--Sobic010G071900 Sobic002G264400 Sobic002G264400 Sobic010G185500--Sobic002G264400 Sobic010G185500--Sobic003G206900 Sobic008G189300 Sobic008G189300 Sobic010G185500--Sobic008G189300 Sobic006G264300 Sobic006G264300 Sobic010G185500--Sobic006G264300 Sobic010G185500--Sobic010G019900 Sobic010G243200 Sobic010G243200 Sobic010G185500--Sobic010G243200 Sobic003G228000 Sobic003G228000 Sobic010G185500--Sobic003G228000 Sobic005G092900--Sobic004G107700 Sobic009G139400 Sobic009G139400 Sobic005G092900--Sobic009G139400 Sobic004G176600 Sobic004G176600 Sobic005G092900--Sobic004G176600 Sobic001G503100 Sobic001G503100 Sobic005G092900--Sobic001G503100 Sobic006G106800 Sobic006G106800 Sobic005G092900--Sobic006G106800 Sobic009G077800 Sobic009G077800 Sobic005G092900--Sobic009G077800 Sobic001G400700 Sobic001G400700 Sobic005G092900--Sobic001G400700 Sobic001G481400 Sobic001G481400 Sobic005G092900--Sobic001G481400 Sobic002G004900 Sobic002G004900 Sobic005G092900--Sobic002G004900 Sobic003G255200 Sobic003G255200 Sobic004G107700--Sobic003G255200 Sobic004G107700--Sobic003G437200 Sobic002G125700 Sobic002G125700 Sobic004G107700--Sobic002G125700 Sobic003G417800 Sobic003G417800 Sobic004G107700--Sobic003G417800 Sobic004G107700--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic004G107700--Sobic002G034800 Sobic004G107700--Sobic009G139400 Sobic003G352300 Sobic003G352300 Sobic004G107700--Sobic003G352300 Sobic004G107700--Sobic004G176600 Sobic005G203100 Sobic005G203100 Sobic007G148000--Sobic005G203100 Sobic007G148000--Sobic003G240600 Sobic002G310500 Sobic002G310500 Sobic007G148000--Sobic002G310500 Sobic007G135201 Sobic007G135201 Sobic007G148000--Sobic007G135201 Sobic003G088500 Sobic003G088500 Sobic007G148000--Sobic003G088500 Sobic008G082200 Sobic008G082200 Sobic007G148000--Sobic008G082200 Sobic007G148000--Sobic003G426100 Sobic001G243600 Sobic001G243600 Sobic007G148000--Sobic001G243600 Sobic010G239300 Sobic010G239300 Sobic007G148000--Sobic010G239300
Octagon: transcription factors


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