Gene annotation
Transcriptome id Sobic.010G019900.1
Synonym ATB2, Sb10g001900
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5Z396
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF12
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60710 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os04g26910.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005311 , Zm00025a041363 , Zm00025a014620
Brachypodium KQK00249 , KQK00248
Barley HORVU2Hr1G066920.9 , HORVU2Hr1G066920.8 , HORVU2Hr1G066920.3 , HORVU2Hr1G066920.2 , HORVU2Hr1G066920.1 , HORVU2Hr1G066920.7 , HORVU2Hr1G066920.6 , HORVU2Hr1G066920.5 , HORVU2Hr1G066920.4 , HORVU2Hr1G066920.10 , HORVU3Hr1G054640.4 , HORVU3Hr1G054640.5 , HORVU3Hr1G054640.2 , HORVU3Hr1G054640.3 , HORVU3Hr1G054640.1 , HORVU2Hr1G082740.1 , HORVU2Hr1G082740.3 , HORVU2Hr1G082740.2 , HORVU2Hr1G082740.5 , HORVU2Hr1G082740.4 , HORVU2Hr1G082740.7 , HORVU2Hr1G082740.6
Wheat TraesCS5D02G336900 , TraesCS2D02G336900 , TraesCS2B02G356100 , TraesCS2A02G274800 , TraesCS2A02G274800 , TraesCS2A02G274800 , TraesCS2A02G274800 , TraesCS2A02G274800 , TraesCS3A02G222900 , TraesCS2D02G336700 , TraesCS5B02G523200 , TraesCS2B02G292100 , TraesCS3B02G252400 , TraesCS5A02G331200 , TraesCS2A02G326100 , TraesCS3D02G230600 , TraesCS2D02G336800 , TraesCS2D02G273600 , TraesCS2B02G355900 , TraesCS2D02G273400 , TraesCS4A02G349500 , TraesCS4A02G349500 , TraesCS5D02G522300 , TraesCS2A02G274700 , TraesCS5B02G331500
Populus -


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cDNA sequences
Sobic.010G019900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G099900 expressed protein -
2 Sobic.002G261000 expressed protein -
3 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
5 Sobic.001G499300 high-affinity nickel-transport family protein, putative, expressed -
6 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
7 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
9 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
10 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
11 Sobic.005G092900 - -
12 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
13 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.009G139400 expressed protein -
15 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
16 Sobic.001G459200 MYB family transcription factor, putative, expressed -
17 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.001G339700 expressed protein -
19 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -


Gene co-expression network
sample Sobic010G019900 Sobic010G019900 Sobic010G099900 Sobic010G099900 Sobic010G019900--Sobic010G099900 Sobic002G261000 Sobic002G261000 Sobic010G019900--Sobic002G261000 Sobic001G119400 Sobic001G119400 Sobic010G019900--Sobic001G119400 Sobic010G009300 Sobic010G009300 Sobic010G019900--Sobic010G009300 Sobic001G499300 Sobic001G499300 Sobic010G019900--Sobic001G499300 Sobic001G177800 Sobic001G177800 Sobic010G019900--Sobic001G177800 Sobic010G117900 Sobic010G117900 Sobic010G019900--Sobic010G117900 Sobic002G187500 Sobic002G187500 Sobic010G019900--Sobic002G187500 Sobic006G173900 Sobic006G173900 Sobic010G019900--Sobic006G173900 Sobic010G099900--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic010G099900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic010G099900--Sobic006G275200 Sobic009G008900 Sobic009G008900 Sobic010G099900--Sobic009G008900 Sobic010G099900--Sobic001G119400 Sobic006G127900 Sobic006G127900 Sobic010G099900--Sobic006G127900 Sobic008G136400 Sobic008G136400 Sobic010G099900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic010G099900--Sobic002G414600 Sobic004G216600 Sobic004G216600 Sobic010G099900--Sobic004G216600 Sobic001G317000 Sobic001G317000 Sobic002G261000--Sobic001G317000 Sobic002G261000--Sobic006G275200 Sobic002G261000--Sobic001G119400 Sobic002G261000--Sobic004G216600 Sobic002G261000--Sobic009G008900 Sobic001G097600 Sobic001G097600 Sobic002G261000--Sobic001G097600 Sobic001G319600 Sobic001G319600 Sobic002G261000--Sobic001G319600 Sobic003G297600 Sobic003G297600 Sobic002G261000--Sobic003G297600 Sobic001G317200 Sobic001G317200 Sobic002G261000--Sobic001G317200 Sobic009G183400 Sobic009G183400 Sobic001G119400--Sobic009G183400 Sobic001G423800 Sobic001G423800 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G038900 Sobic001G038900 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic010G009300--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic010G009300--Sobic007G184600 Sobic010G009300--Sobic009G139400 Sobic010G009300--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic010G009300--Sobic002G190900 Sobic001G252300 Sobic001G252300 Sobic010G009300--Sobic001G252300 Sobic009G077800 Sobic009G077800 Sobic010G009300--Sobic009G077800 Sobic010G009300--Sobic006G099900 Sobic004G107700 Sobic004G107700 Sobic010G009300--Sobic004G107700 Sobic001G281400 Sobic001G281400 Sobic001G499300--Sobic001G281400 Sobic001G499300--Sobic009G008900 Sobic001G499300--Sobic001G177800 Sobic004G187900 Sobic004G187900 Sobic001G499300--Sobic004G187900 Sobic001G459200 Sobic001G459200 Sobic001G499300--Sobic001G459200 Sobic001G499300--Sobic006G173900 Sobic001G393500 Sobic001G393500 Sobic001G499300--Sobic001G393500 Sobic002G312400 Sobic002G312400 Sobic001G499300--Sobic002G312400 Sobic001G477300 Sobic001G477300 Sobic001G499300--Sobic001G477300 Sobic001G177800--Sobic007G184600 Sobic001G177800--Sobic009G139400 Sobic001G374700 Sobic001G374700 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic007G227300 Sobic007G227300 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic001G177800--Sobic006G099900 Sobic001G177800--Sobic010G009300 Sobic005G101800 Sobic005G101800 Sobic010G117900--Sobic005G101800 Sobic003G252800 Sobic003G252800 Sobic010G117900--Sobic003G252800 Sobic010G084700 Sobic010G084700 Sobic010G117900--Sobic010G084700 Sobic010G117900--Sobic007G227300 Sobic004G221500 Sobic004G221500 Sobic010G117900--Sobic004G221500 Sobic010G084400 Sobic010G084400 Sobic010G117900--Sobic010G084400 Sobic007G067600 Sobic007G067600 Sobic010G117900--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic010G117900--Sobic002G195400 Sobic001G348700 Sobic001G348700 Sobic010G117900--Sobic001G348700 Sobic002G187500--Sobic010G009300 Sobic003G285800 Sobic003G285800 Sobic002G187500--Sobic003G285800 Sobic002G187500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic002G187500--Sobic002G046100 Sobic003G072300 Sobic003G072300 Sobic002G187500--Sobic003G072300 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700 Sobic006G173900--Sobic009G008900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700
Octagon: transcription factors


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