Gene annotation
Transcriptome id Sobic.006G107200.1
Synonym CNX3, Sb06g018990
Functional annotation molybdopterin biosynthesis protein CNX3, putative, expressed
UniProt C5Y9U8
Pfam PF01967
Panther DB PTHR22960
NCBI CDD -
KEGG Orthology K03639; moaA, GTP 3',8-cyclase
Gene Ontology GO:0006777; Mo-molybdopterin cofactor biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G01290 : cofactor of nitrate reductase and xanthine dehydrogenase 3
RAP-DB (Rice) LOC_Os04g38700.2 : molybdopterin biosynthesis protein CNX3, putative, expressed
MaizeGDB (Corn) Zm00025a011118
Brachypodium KQJ82979
Barley HORVU2Hr1G080450.5 , HORVU2Hr1G080450.4 , HORVU2Hr1G080450.3 , HORVU2Hr1G080450.2 , HORVU2Hr1G080450.1
Wheat TraesCS2B02G343500 , TraesCS2A02G338400 , TraesCS2D02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.009G068200 phosphoribosyl transferase, putative, expressed K00760: hprT, hpt, hypoxanthine phosphoribosyltransferase
3 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
4 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
6 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
8 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
9 Sobic.001G348700 - -
10 Sobic.007G067350 - -
11 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
12 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
14 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
16 Sobic.007G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
17 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
18 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
19 Sobic.010G099900 expressed protein -
20 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic006G107200 Sobic006G107200 Sobic010G117900 Sobic010G117900 Sobic006G107200--Sobic010G117900 Sobic009G068200 Sobic009G068200 Sobic006G107200--Sobic009G068200 Sobic004G221500 Sobic004G221500 Sobic006G107200--Sobic004G221500 Sobic001G231600 Sobic001G231600 Sobic006G107200--Sobic001G231600 Sobic006G173900 Sobic006G173900 Sobic006G107200--Sobic006G173900 Sobic002G183100 Sobic002G183100 Sobic006G107200--Sobic002G183100 Sobic006G084600 Sobic006G084600 Sobic006G107200--Sobic006G084600 Sobic010G084700 Sobic010G084700 Sobic006G107200--Sobic010G084700 Sobic001G348700 Sobic001G348700 Sobic006G107200--Sobic001G348700 Sobic005G101800 Sobic005G101800 Sobic010G117900--Sobic005G101800 Sobic003G252800 Sobic003G252800 Sobic010G117900--Sobic003G252800 Sobic010G117900--Sobic010G084700 Sobic007G227300 Sobic007G227300 Sobic010G117900--Sobic007G227300 Sobic010G117900--Sobic004G221500 Sobic010G084400 Sobic010G084400 Sobic010G117900--Sobic010G084400 Sobic007G067600 Sobic007G067600 Sobic010G117900--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic010G117900--Sobic002G195400 Sobic010G117900--Sobic001G348700 Sobic009G068200--Sobic006G107200 Sobic003G136000 Sobic003G136000 Sobic009G068200--Sobic003G136000 Sobic001G288800 Sobic001G288800 Sobic009G068200--Sobic001G288800 Sobic002G264400 Sobic002G264400 Sobic009G068200--Sobic002G264400 Sobic005G034400 Sobic005G034400 Sobic009G068200--Sobic005G034400 Sobic004G037000 Sobic004G037000 Sobic009G068200--Sobic004G037000 Sobic009G068200--Sobic006G173900 Sobic006G264300 Sobic006G264300 Sobic009G068200--Sobic006G264300 Sobic008G059200 Sobic008G059200 Sobic009G068200--Sobic008G059200 Sobic004G221500--Sobic010G084700 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic002G184200 Sobic002G184200 Sobic004G221500--Sobic002G184200 Sobic001G423800 Sobic001G423800 Sobic004G221500--Sobic001G423800 Sobic010G084100 Sobic010G084100 Sobic004G221500--Sobic010G084100 Sobic004G221500--Sobic003G252800 Sobic003G286600 Sobic003G286600 Sobic004G221500--Sobic003G286600 Sobic004G221500--Sobic010G117900 Sobic007G135201 Sobic007G135201 Sobic001G231600--Sobic007G135201 Sobic001G231600--Sobic007G067600 Sobic001G495164 Sobic001G495164 Sobic001G231600--Sobic001G495164 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic010G102300 Sobic010G102300 Sobic001G231600--Sobic010G102300 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic001G231600--Sobic004G221500 Sobic009G008900 Sobic009G008900 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic002G393000 Sobic002G393000 Sobic006G173900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic006G173900--Sobic006G275200 Sobic008G136400 Sobic008G136400 Sobic006G173900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic006G173900--Sobic002G414600 Sobic001G119400 Sobic001G119400 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic008G140300 Sobic008G140300 Sobic002G183100--Sobic008G140300 Sobic002G183100--Sobic001G348700 Sobic002G183100--Sobic004G221500 Sobic007G067400 Sobic007G067400 Sobic002G183100--Sobic007G067400 Sobic002G183100--Sobic010G084700 Sobic001G487300 Sobic001G487300 Sobic002G183100--Sobic001G487300 Sobic002G183100--Sobic004G037000 Sobic002G183100--Sobic002G184200 Sobic002G182500 Sobic002G182500 Sobic002G183100--Sobic002G182500 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic007G155100 Sobic007G155100 Sobic006G084600--Sobic007G155100 Sobic003G317100 Sobic003G317100 Sobic006G084600--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic006G084600--Sobic003G437200 Sobic007G066932 Sobic007G066932 Sobic006G084600--Sobic007G066932 Sobic006G084600--Sobic001G348700 Sobic010G084300 Sobic010G084300 Sobic006G084600--Sobic010G084300 Sobic006G084600--Sobic001G231600 Sobic010G084700--Sobic004G221500 Sobic010G084700--Sobic010G084100 Sobic010G084700--Sobic010G117900 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic006G099900 Sobic006G099900 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200
Octagon: transcription factors


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