Gene annotation
Transcriptome id Sobic.007G090200.1
Synonym GPP1, Sb07g007840
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
UniProt C5YJJ3
Pfam PF13419
Panther DB PTHR18901 PTHR18901:SF38
NCBI CDD KOG2914; Predicted haloacid-halidohydrolase and related hydrolases
KEGG Orthology K17623; PUDP, pseudouridine 5'-phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25840 : glycerol-3-phosphatase 1
RAP-DB (Rice) LOC_Os08g14580.1 : haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
MaizeGDB (Corn) Zm00025a054654
Brachypodium KQJ95767
Barley HORVU3Hr1G109780.2 , HORVU3Hr1G109780.3 , HORVU3Hr1G109780.1
Wheat TraesCS7D02G118300 , TraesCS3A02G495800 , TraesCS3B02G559400 , TraesCS3D02G503200 , TraesCS7B02G017100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
2 Sobic.010G267400 similar to Heat shock protein 90(PubMedID : 29862293)@heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
3 Sobic.010G040100 expressed protein -
4 Sobic.002G209400 transcription initiation factor TFIID subunit 10, putative, expressed K03134: transcription initiation factor TFIID subunit 10
5 Sobic.008G103800 expressed protein -
6 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
7 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
8 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.008G087900 expressed protein -
10 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
11 Sobic.008G048300 transcription elongation factor protein, putative, expressed -
12 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
13 Sobic.009G174000 expressed protein -
14 Sobic.007G117500 stromal cell-derived factor 2-like protein precursor, putative, expressed -
15 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
16 Sobic.004G121300 ATP11 protein, expressed K07555: ATPeAF1, ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1
17 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
18 Sobic.008G000400 GHMP kinases ATP-binding protein, putative, expressed K16190: glucuronokinase
19 Sobic.001G048200 elongation factor P, putative, expressed -
20 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16


Gene co-expression network
sample Sobic007G090200 Sobic007G090200 Sobic008G004300 Sobic008G004300 Sobic007G090200--Sobic008G004300 Sobic010G267400 Sobic010G267400 Sobic007G090200--Sobic010G267400 Sobic010G040100 Sobic010G040100 Sobic007G090200--Sobic010G040100 Sobic002G209400 Sobic002G209400 Sobic007G090200--Sobic002G209400 Sobic008G103800 Sobic008G103800 Sobic007G090200--Sobic008G103800 Sobic005G004100 Sobic005G004100 Sobic007G090200--Sobic005G004100 Sobic001G462200 Sobic001G462200 Sobic007G090200--Sobic001G462200 Sobic005G111900 Sobic005G111900 Sobic007G090200--Sobic005G111900 Sobic008G087900 Sobic008G087900 Sobic007G090200--Sobic008G087900 Sobic004G290000 Sobic004G290000 Sobic008G004300--Sobic004G290000 Sobic002G166300 Sobic002G166300 Sobic008G004300--Sobic002G166300 Sobic001G301200 Sobic001G301200 Sobic008G004300--Sobic001G301200 Sobic008G004300--Sobic005G004100 Sobic009G139900 Sobic009G139900 Sobic008G004300--Sobic009G139900 Sobic001G434200 Sobic001G434200 Sobic008G004300--Sobic001G434200 Sobic008G004300--Sobic002G209400 Sobic001G333100 Sobic001G333100 Sobic008G004300--Sobic001G333100 Sobic010G206300 Sobic010G206300 Sobic008G004300--Sobic010G206300 Sobic010G267400--Sobic010G040100 Sobic010G267400--Sobic008G103800 Sobic009G051700 Sobic009G051700 Sobic010G267400--Sobic009G051700 Sobic010G267400--Sobic007G090200 Sobic002G186300 Sobic002G186300 Sobic010G267400--Sobic002G186300 Sobic004G184000 Sobic004G184000 Sobic010G267400--Sobic004G184000 Sobic002G367800 Sobic002G367800 Sobic010G267400--Sobic002G367800 Sobic002G070600 Sobic002G070600 Sobic010G267400--Sobic002G070600 Sobic005G112100 Sobic005G112100 Sobic010G267400--Sobic005G112100 Sobic010G040100--Sobic010G267400 Sobic010G040100--Sobic007G090200 Sobic004G013000 Sobic004G013000 Sobic010G040100--Sobic004G013000 Sobic010G040100--Sobic005G004100 Sobic010G040100--Sobic009G051700 Sobic010G040100--Sobic002G186300 Sobic003G105000 Sobic003G105000 Sobic010G040100--Sobic003G105000 Sobic007G117500 Sobic007G117500 Sobic010G040100--Sobic007G117500 Sobic005G194900 Sobic005G194900 Sobic010G040100--Sobic005G194900 Sobic001G263000 Sobic001G263000 Sobic002G209400--Sobic001G263000 Sobic006G244700 Sobic006G244700 Sobic002G209400--Sobic006G244700 Sobic004G232800 Sobic004G232800 Sobic002G209400--Sobic004G232800 Sobic007G061400 Sobic007G061400 Sobic002G209400--Sobic007G061400 Sobic007G188300 Sobic007G188300 Sobic002G209400--Sobic007G188300 Sobic010G057900 Sobic010G057900 Sobic002G209400--Sobic010G057900 Sobic002G111200 Sobic002G111200 Sobic002G209400--Sobic002G111200 Sobic002G209400--Sobic005G111900 Sobic001G014800 Sobic001G014800 Sobic002G209400--Sobic001G014800 Sobic008G051100 Sobic008G051100 Sobic008G103800--Sobic008G051100 Sobic005G155800 Sobic005G155800 Sobic008G103800--Sobic005G155800 Sobic008G103800--Sobic004G184000 Sobic004G124100 Sobic004G124100 Sobic008G103800--Sobic004G124100 Sobic008G103800--Sobic010G267400 Sobic001G408800 Sobic001G408800 Sobic008G103800--Sobic001G408800 Sobic006G281500 Sobic006G281500 Sobic008G103800--Sobic006G281500 Sobic006G020900 Sobic006G020900 Sobic008G103800--Sobic006G020900 Sobic005G105500 Sobic005G105500 Sobic008G103800--Sobic005G105500 Sobic009G256000 Sobic009G256000 Sobic005G004100--Sobic009G256000 Sobic004G060100 Sobic004G060100 Sobic005G004100--Sobic004G060100 Sobic004G283600 Sobic004G283600 Sobic005G004100--Sobic004G283600 Sobic005G018800 Sobic005G018800 Sobic005G004100--Sobic005G018800 Sobic007G161200 Sobic007G161200 Sobic005G004100--Sobic007G161200 Sobic008G021200 Sobic008G021200 Sobic005G004100--Sobic008G021200 Sobic005G004100--Sobic008G004300 Sobic002G301200 Sobic002G301200 Sobic005G004100--Sobic002G301200 Sobic002G410700 Sobic002G410700 Sobic005G004100--Sobic002G410700 Sobic001G486700 Sobic001G486700 Sobic001G462200--Sobic001G486700 Sobic003G378400 Sobic003G378400 Sobic001G462200--Sobic003G378400 Sobic009G124000 Sobic009G124000 Sobic001G462200--Sobic009G124000 Sobic004G018000 Sobic004G018000 Sobic001G462200--Sobic004G018000 Sobic004G016400 Sobic004G016400 Sobic001G462200--Sobic004G016400 Sobic007G208300 Sobic007G208300 Sobic001G462200--Sobic007G208300 Sobic001G116500 Sobic001G116500 Sobic001G462200--Sobic001G116500 Sobic003G193700 Sobic003G193700 Sobic001G462200--Sobic003G193700 Sobic001G462200--Sobic008G004300 Sobic005G111900--Sobic007G061400 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500 Sobic006G160100 Sobic006G160100 Sobic008G087900--Sobic006G160100 Sobic008G087900--Sobic001G434200 Sobic008G087900--Sobic005G111900 Sobic007G028500 Sobic007G028500 Sobic008G087900--Sobic007G028500 Sobic002G181600 Sobic002G181600 Sobic008G087900--Sobic002G181600 Sobic002G047500 Sobic002G047500 Sobic008G087900--Sobic002G047500 Sobic006G274800 Sobic006G274800 Sobic008G087900--Sobic006G274800 Sobic006G039400 Sobic006G039400 Sobic008G087900--Sobic006G039400 Sobic001G412100 Sobic001G412100 Sobic008G087900--Sobic001G412100
Octagon: transcription factors


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