Gene annotation
Transcriptome id Sobic.002G209400.1,Sobic.002G209400.2
Synonym STG1, Sb02g025360, TAF10, TAFII15
Functional annotation transcription initiation factor TFIID subunit 10, putative, expressed
UniProt C5XD11 , A0A1W0W599
Pfam PF03540
Panther DB PTHR21242 PTHR21242:SF0
NCBI CDD -
KEGG Orthology K03134; transcription initiation factor TFIID subunit 10
Gene Ontology GO:0006352; DNA-templated transcription, initiation GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G31720 : TBP-associated factor II 15
RAP-DB (Rice) LOC_Os09g26180.1 : transcription initiation factor TFIID subunit 10, putative, expressed
MaizeGDB (Corn) Zm00025a047091
Brachypodium KQK20487 , KQK20486
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G209400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
3 Sobic.004G232800 expressed protein -
4 Sobic.007G061400 heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
5 Sobic.007G188300 integral membrane family protein, putative, expressed -
6 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
7 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
8 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
10 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
11 Sobic.004G175300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed K03660: N-glycosylase/DNA lyase
12 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
13 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
14 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
15 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
16 Sobic.010G205300 secreted salivary protein, putative, expressed -
17 Sobic.009G149500 coiled-coil domain-containing protein 47 precursor, putative, expressed -
18 Sobic.007G117500 stromal cell-derived factor 2-like protein precursor, putative, expressed -
19 Sobic.003G167900 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.008G133600 diaminopimelate epimerase, chloroplast precursor, putative, expressed K01778: diaminopimelate epimerase


Gene co-expression network
sample Sobic002G209400 Sobic002G209400 Sobic001G263000 Sobic001G263000 Sobic002G209400--Sobic001G263000 Sobic006G244700 Sobic006G244700 Sobic002G209400--Sobic006G244700 Sobic004G232800 Sobic004G232800 Sobic002G209400--Sobic004G232800 Sobic007G061400 Sobic007G061400 Sobic002G209400--Sobic007G061400 Sobic007G188300 Sobic007G188300 Sobic002G209400--Sobic007G188300 Sobic010G057900 Sobic010G057900 Sobic002G209400--Sobic010G057900 Sobic002G111200 Sobic002G111200 Sobic002G209400--Sobic002G111200 Sobic005G111900 Sobic005G111900 Sobic002G209400--Sobic005G111900 Sobic001G014800 Sobic001G014800 Sobic002G209400--Sobic001G014800 Sobic009G004600 Sobic009G004600 Sobic001G263000--Sobic009G004600 Sobic001G263000--Sobic006G244700 Sobic009G033900 Sobic009G033900 Sobic001G263000--Sobic009G033900 Sobic001G263000--Sobic002G209400 Sobic002G268400 Sobic002G268400 Sobic001G263000--Sobic002G268400 Sobic002G039000 Sobic002G039000 Sobic001G263000--Sobic002G039000 Sobic004G074300 Sobic004G074300 Sobic001G263000--Sobic004G074300 Sobic004G356900 Sobic004G356900 Sobic001G263000--Sobic004G356900 Sobic001G263000--Sobic010G057900 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic005G044800 Sobic005G044800 Sobic006G244700--Sobic005G044800 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic010G205300 Sobic010G205300 Sobic004G232800--Sobic010G205300 Sobic004G232800--Sobic004G356900 Sobic004G232800--Sobic009G004600 Sobic006G049700 Sobic006G049700 Sobic004G232800--Sobic006G049700 Sobic009G192000 Sobic009G192000 Sobic004G232800--Sobic009G192000 Sobic004G232800--Sobic010G057900 Sobic003G349300 Sobic003G349300 Sobic004G232800--Sobic003G349300 Sobic004G226800 Sobic004G226800 Sobic004G232800--Sobic004G226800 Sobic002G113900 Sobic002G113900 Sobic004G232800--Sobic002G113900 Sobic006G002201 Sobic006G002201 Sobic007G061400--Sobic006G002201 Sobic007G061400--Sobic005G111900 Sobic007G061400--Sobic010G205300 Sobic003G196800 Sobic003G196800 Sobic007G061400--Sobic003G196800 Sobic001G502200 Sobic001G502200 Sobic007G061400--Sobic001G502200 Sobic001G294900 Sobic001G294900 Sobic007G061400--Sobic001G294900 Sobic001G458700 Sobic001G458700 Sobic007G061400--Sobic001G458700 Sobic007G061400--Sobic010G057900 Sobic003G124800 Sobic003G124800 Sobic007G061400--Sobic003G124800 Sobic009G149500 Sobic009G149500 Sobic007G188300--Sobic009G149500 Sobic001G085100 Sobic001G085100 Sobic007G188300--Sobic001G085100 Sobic007G188300--Sobic010G205300 Sobic007G188300--Sobic006G244700 Sobic007G188300--Sobic001G263000 Sobic007G188300--Sobic001G014800 Sobic007G014900 Sobic007G014900 Sobic007G188300--Sobic007G014900 Sobic007G188300--Sobic004G356900 Sobic007G188300--Sobic002G209400 Sobic010G057900--Sobic002G268400 Sobic006G101700 Sobic006G101700 Sobic010G057900--Sobic006G101700 Sobic002G143000 Sobic002G143000 Sobic010G057900--Sobic002G143000 Sobic001G078800 Sobic001G078800 Sobic010G057900--Sobic001G078800 Sobic003G314100 Sobic003G314100 Sobic010G057900--Sobic003G314100 Sobic010G057900--Sobic009G192000 Sobic010G057900--Sobic010G205300 Sobic010G057900--Sobic001G458700 Sobic010G057900--Sobic004G356900 Sobic001G339500 Sobic001G339500 Sobic002G111200--Sobic001G339500 Sobic002G111200--Sobic001G014800 Sobic001G219300 Sobic001G219300 Sobic002G111200--Sobic001G219300 Sobic002G339600 Sobic002G339600 Sobic002G111200--Sobic002G339600 Sobic010G277100 Sobic010G277100 Sobic002G111200--Sobic010G277100 Sobic008G118900 Sobic008G118900 Sobic002G111200--Sobic008G118900 Sobic002G309900 Sobic002G309900 Sobic002G111200--Sobic002G309900 Sobic002G111200--Sobic002G209400 Sobic002G111200--Sobic009G004600 Sobic005G111900--Sobic007G061400 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic005G111900--Sobic003G349300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic005G111900--Sobic009G149500 Sobic010G020400 Sobic010G020400 Sobic001G014800--Sobic010G020400 Sobic009G084000 Sobic009G084000 Sobic001G014800--Sobic009G084000 Sobic008G033500 Sobic008G033500 Sobic001G014800--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic001G014800--Sobic001G333100 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic002G263600 Sobic002G263600 Sobic001G014800--Sobic002G263600
Octagon: transcription factors


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