Gene annotation
Transcriptome id Sobic.002G186300.1
Synonym PK3, Sb02g023430, ATPK3
Functional annotation serine/threonine-protein kinase 16, putative, expressed
UniProt A0A1B6QC94
Pfam PF07714
Panther DB PTHR22967:SF66 PTHR22967
NCBI CDD KOG2345; Serine/threonine protein kinase/TGF-beta stimulated factor
KEGG Orthology K08856; serine/threonine kinase 16
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT5G08160 : serine/threonine protein kinase 3
RAP-DB (Rice) LOC_Os09g20640.1 : serine/threonine-protein kinase 16, putative, expressed
MaizeGDB (Corn) Zm00025a046746
Brachypodium KQJ90057 , KQJ90058 , KQJ90059
Barley HORVU5Hr1G058870.3 , HORVU5Hr1G058870.2 , HORVU5Hr1G058870.1
Wheat TraesCS5D02G202500 , TraesCS5D02G202500 , TraesCS5D02G202500 , TraesCS5A02G188500 , TraesCS5A02G188500 , TraesCS5B02G195100 , TraesCS5B02G195100
Populus -


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cDNA sequences
Sobic.002G186300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
2 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
3 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
4 Sobic.004G297700 ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
5 Sobic.004G244000 dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
6 Sobic.001G115700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K03934: NADH dehydrogenase (ubiquinone) Fe-S protein 1
7 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
8 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
9 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
10 Sobic.002G070300 expressed protein -
11 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
12 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
13 Sobic.003G028200 expressed protein -
14 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
15 Sobic.008G072200 coatomer subunit delta, putative, expressed -
16 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
17 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
18 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
19 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
20 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic002G186300 Sobic002G186300 Sobic001G458800 Sobic001G458800 Sobic002G186300--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic002G186300--Sobic003G034900 Sobic007G119600 Sobic007G119600 Sobic002G186300--Sobic007G119600 Sobic004G297700 Sobic004G297700 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic001G115700 Sobic001G115700 Sobic002G186300--Sobic001G115700 Sobic009G224400 Sobic009G224400 Sobic002G186300--Sobic009G224400 Sobic001G457000 Sobic001G457000 Sobic002G186300--Sobic001G457000 Sobic008G057900 Sobic008G057900 Sobic002G186300--Sobic008G057900 Sobic001G458800--Sobic003G034900 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic003G034900--Sobic001G458800 Sobic001G465400 Sobic001G465400 Sobic003G034900--Sobic001G465400 Sobic004G093600 Sobic004G093600 Sobic003G034900--Sobic004G093600 Sobic003G034900--Sobic001G115700 Sobic001G047600 Sobic001G047600 Sobic003G034900--Sobic001G047600 Sobic003G034900--Sobic007G171500 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic003G034900--Sobic001G457000 Sobic007G119600--Sobic009G224400 Sobic009G191400 Sobic009G191400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic007G119600--Sobic001G457000 Sobic007G119600--Sobic001G073600 Sobic002G255400 Sobic002G255400 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic003G388700 Sobic003G388700 Sobic007G119600--Sobic003G388700 Sobic003G260600 Sobic003G260600 Sobic007G119600--Sobic003G260600 Sobic004G297700--Sobic007G171500 Sobic010G032600 Sobic010G032600 Sobic004G297700--Sobic010G032600 Sobic006G276700 Sobic006G276700 Sobic004G297700--Sobic006G276700 Sobic004G297700--Sobic002G186300 Sobic004G297700--Sobic004G244000 Sobic007G023400 Sobic007G023400 Sobic004G297700--Sobic007G023400 Sobic004G297700--Sobic001G457000 Sobic004G202100 Sobic004G202100 Sobic004G297700--Sobic004G202100 Sobic004G297700--Sobic003G034900 Sobic004G244000--Sobic004G297700 Sobic004G244000--Sobic002G186300 Sobic004G244000--Sobic003G034900 Sobic004G244000--Sobic007G171500 Sobic004G244000--Sobic007G119600 Sobic004G244000--Sobic001G458800 Sobic004G244000--Sobic001G457000 Sobic004G244000--Sobic009G224400 Sobic004G244000--Sobic006G058900 Sobic001G115700--Sobic001G458800 Sobic001G115700--Sobic003G034900 Sobic001G115700--Sobic001G465400 Sobic008G072200 Sobic008G072200 Sobic001G115700--Sobic008G072200 Sobic001G115700--Sobic004G347600 Sobic005G018800 Sobic005G018800 Sobic001G115700--Sobic005G018800 Sobic001G115700--Sobic009G191400 Sobic003G200800 Sobic003G200800 Sobic001G115700--Sobic003G200800 Sobic001G115700--Sobic002G186300 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic009G224400--Sobic004G155100 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic001G457000--Sobic007G119600 Sobic001G457000--Sobic004G093600 Sobic004G218600 Sobic004G218600 Sobic001G457000--Sobic004G218600 Sobic009G259200 Sobic009G259200 Sobic001G457000--Sobic009G259200 Sobic001G457000--Sobic009G224400 Sobic001G457000--Sobic003G034900 Sobic001G387200 Sobic001G387200 Sobic001G457000--Sobic001G387200 Sobic001G457000--Sobic010G032600 Sobic001G457000--Sobic007G171500 Sobic001G543400 Sobic001G543400 Sobic008G057900--Sobic001G543400 Sobic002G153000 Sobic002G153000 Sobic008G057900--Sobic002G153000 Sobic003G075200 Sobic003G075200 Sobic008G057900--Sobic003G075200 Sobic001G011000 Sobic001G011000 Sobic008G057900--Sobic001G011000 Sobic004G356300 Sobic004G356300 Sobic008G057900--Sobic004G356300 Sobic008G057900--Sobic002G186300 Sobic002G367800 Sobic002G367800 Sobic008G057900--Sobic002G367800 Sobic002G217500 Sobic002G217500 Sobic008G057900--Sobic002G217500 Sobic002G090500 Sobic002G090500 Sobic008G057900--Sobic002G090500
Octagon: transcription factors


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