Gene annotation
Transcriptome id Sobic.001G279900.2,Sobic.001G279900.1
Synonym SORBI_3001G279900 , Sb01g027530, SORBIDRAFT_01g027530, CRCK3
Functional annotation CDPK - calmodulin-binding receptor-like cytoplasmic kinase 3 (PubMedID : 31721651)
wall-associated receptor kinase-like 20 precursor, putative, expressed
UniProt A0A1Z5S801 , C5WQK0
Pfam PF00069 PF07714
Panther DB PTHR27003 PTHR27003:SF28
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G11520 : calmodulin-binding receptor-like cytoplasmic kinase 3
RAP-DB (Rice) LOC_Os09g03620.1 : wall-associated receptor kinase-like 20 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003606
Brachypodium KQK19768 , KQK19769
Barley HORVU5Hr1G050870.1 , HORVU5Hr1G050870.4 , HORVU5Hr1G050870.6 , HORVU5Hr1G050870.5 , HORVU5Hr1G050870.3 , HORVU5Hr1G050870.2
Wheat TraesCS5B02G160500 , TraesCS5A02G163300 , TraesCS5D02G168100 , TraesCS5D02G168100 , TraesCS5D02G168100
Populus -


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cDNA sequences
Sobic.001G279900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
2 Sobic.002G404200 F-box domain containing protein, expressed -
3 Sobic.001G402500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
4 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
5 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
6 Sobic.003G378400 DUF803 domain containing, putative, expressed -
7 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
8 Sobic.004G026500 expressed protein -
9 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
10 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
11 Sobic.006G083800 expressed protein -
12 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
13 Sobic.008G081300 protein kinase, putative, expressed -
14 Sobic.001G120500 toc64, putative, expressed -
15 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
16 Sobic.004G144000 - -
17 Sobic.004G262700 - -
18 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
19 Sobic.007G227700 expressed protein -
20 Sobic.001G072700 expressed protein -


Gene co-expression network
sample Sobic001G279900 Sobic001G279900 Sobic002G168500 Sobic002G168500 Sobic001G279900--Sobic002G168500 Sobic002G404200 Sobic002G404200 Sobic001G279900--Sobic002G404200 Sobic001G402500 Sobic001G402500 Sobic001G279900--Sobic001G402500 Sobic009G162600 Sobic009G162600 Sobic001G279900--Sobic009G162600 Sobic008G172300 Sobic008G172300 Sobic001G279900--Sobic008G172300 Sobic003G378400 Sobic003G378400 Sobic001G279900--Sobic003G378400 Sobic010G100800 Sobic010G100800 Sobic001G279900--Sobic010G100800 Sobic004G026500 Sobic004G026500 Sobic001G279900--Sobic004G026500 Sobic001G124100 Sobic001G124100 Sobic001G279900--Sobic001G124100 Sobic002G276100 Sobic002G276100 Sobic002G168500--Sobic002G276100 Sobic002G168500--Sobic001G124100 Sobic002G168500--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic002G168500--Sobic009G193500 Sobic002G168500--Sobic008G172300 Sobic002G339300 Sobic002G339300 Sobic002G168500--Sobic002G339300 Sobic005G014700 Sobic005G014700 Sobic002G168500--Sobic005G014700 Sobic002G168300 Sobic002G168300 Sobic002G168500--Sobic002G168300 Sobic003G381200 Sobic003G381200 Sobic002G168500--Sobic003G381200 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic002G404200--Sobic010G100800 Sobic007G029100 Sobic007G029100 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic010G086900 Sobic010G086900 Sobic002G404200--Sobic010G086900 Sobic001G341800 Sobic001G341800 Sobic002G404200--Sobic001G341800 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic004G040900 Sobic004G040900 Sobic001G402500--Sobic004G040900 Sobic001G120500 Sobic001G120500 Sobic001G402500--Sobic001G120500 Sobic010G265300 Sobic010G265300 Sobic001G402500--Sobic010G265300 Sobic005G142800 Sobic005G142800 Sobic001G402500--Sobic005G142800 Sobic006G119400 Sobic006G119400 Sobic001G402500--Sobic006G119400 Sobic005G026000 Sobic005G026000 Sobic001G402500--Sobic005G026000 Sobic005G231100 Sobic005G231100 Sobic001G402500--Sobic005G231100 Sobic001G402500--Sobic001G124100 Sobic001G402500--Sobic009G162600 Sobic003G340600 Sobic003G340600 Sobic009G162600--Sobic003G340600 Sobic002G349100 Sobic002G349100 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic002G072400 Sobic002G072400 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic008G089900 Sobic008G089900 Sobic009G162600--Sobic008G089900 Sobic004G300100 Sobic004G300100 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic010G197000 Sobic010G197000 Sobic008G172300--Sobic010G197000 Sobic008G172300--Sobic005G142800 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500 Sobic001G462200 Sobic001G462200 Sobic003G378400--Sobic001G462200 Sobic001G486700 Sobic001G486700 Sobic003G378400--Sobic001G486700 Sobic002G428800 Sobic002G428800 Sobic003G378400--Sobic002G428800 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic004G290000 Sobic004G290000 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic006G238700 Sobic006G238700 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic001G501300 Sobic001G501300 Sobic010G100800--Sobic001G501300 Sobic001G261900 Sobic001G261900 Sobic010G100800--Sobic001G261900 Sobic010G100800--Sobic005G026000 Sobic010G100800--Sobic001G300100 Sobic010G100800--Sobic002G404200 Sobic010G100800--Sobic010G086900 Sobic002G031700 Sobic002G031700 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic003G193200 Sobic003G193200 Sobic010G100800--Sobic003G193200 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic004G026500--Sobic002G276100 Sobic001G124100--Sobic004G026500 Sobic001G124100--Sobic001G219700 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G396000 Sobic001G396000 Sobic001G124100--Sobic001G396000 Sobic001G124100--Sobic002G339300 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600
Octagon: transcription factors


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