Gene annotation
| Transcriptome id | Sobic.004G290000.1 |
|---|---|
| Synonym | TPP2, Sb04g032510 |
| Functional annotation | OsSub19 - Putative Subtilisin homologue, expressed |
| UniProt | C5Y1E8 |
| Pfam | PF12580 PF00082 |
| Panther DB | PTHR10795 PTHR10795:SF351 |
| NCBI CDD | - |
| KEGG Orthology | K01280; tripeptidyl-peptidase II |
| Gene Ontology | GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity |
Orthologs (automatic annotation)
| TAIR | AT4G20850 : tripeptidyl peptidase ii |
|---|---|
| RAP-DB (Rice) | LOC_Os02g44520.1 : OsSub19 - Putative Subtilisin homologue, expressed |
| MaizeGDB (Corn) | Zm00025a021425 |
| Brachypodium | PNT69193 , KQK00668 |
| Barley | HORVU6Hr1G063910.5 , HORVU6Hr1G063860.1 , HORVU6Hr1G063910.7 , HORVU6Hr1G063910.3 , HORVU2Hr1G048510.1 , HORVU2Hr1G048500.1 , HORVU2Hr1G048500.2 , HORVU6Hr1G063910.4 , HORVU6Hr1G063910.6 , HORVU6Hr1G063910.1 |
| Wheat | TraesCS6B02G278200 , TraesCS6D02G228700 , TraesCS6D02G228700 , TraesCS6D02G228700 , TraesCS6D02G228700 , TraesCS6D02G228700 , TraesCS6A02G246300 , TraesCS6A02G246300 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G219300 | ABC transporter family protein, putative, expressed | - |
| 2 | Sobic.008G004300 | outer membrane protein, OMP85 family, putative, expressed | K07277: SAM50, TOB55, outer membrane protein insertion porin family |
| 3 | Sobic.004G253100 | armadillo/beta-catenin repeat family protein, putative, expressed | - |
| 4 | Sobic.004G023100 | protein binding protein, putative, expressed | - |
| 5 | Sobic.002G166300 | peroxin-3 family protein, putative, expressed | K13336: peroxin-3 |
| 6 | Sobic.001G004400 | - | K14290: XPO1, exportin-1 |
| 7 | Sobic.005G096400 | protein kinase domain containing protein, expressed | - |
| 8 | Sobic.009G139900 | rab GDP dissociation inhibitor alpha, putative, expressed | K17255: Rab GDP dissociation inhibitor |
| 9 | Sobic.002G428800 | ubiquitin-activating enzyme, putative, expressed | K03178: UBE1, ubiquitin-activating enzyme E1 |
| 10 | Sobic.004G260100 | tetratricopeptide repeat, putative, expressed | K03255: TIF31, protein TIF31 |
| 11 | Sobic.005G140500 | peptidase, M24 family protein, putative, expressed | K01262: Xaa-Pro aminopeptidase |
| 12 | Sobic.010G100800 | alpha-mannosidase 2, putative, expressed | K01231: alpha-mannosidase II |
| 13 | Sobic.006G265200 | zinc finger, RING-type, putative, expressed | K17592: sacsin |
| 14 | Sobic.010G053600 | pre-mRNA-processing-splicing factor 8, putative, expressed | K12856: PRPF8, pre-mRNA-processing factor 8 |
| 15 | Sobic.010G139500 | phospholipid-transporting ATPase, putative, expressed | K01530: phospholipid-translocating ATPase |
| 16 | Sobic.006G083300 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed | K18995: ATP-dependent RNA helicase DHX29 |
| 17 | Sobic.003G233600 | aspartyl aminopeptidase, putative, expressed | K01267: aspartyl aminopeptidase |
| 18 | Sobic.004G176000 | "SDG725(Ortholog in rice:Sui et al., 2012)"(PubMedID : 31659884)@histone-lysine N-methyltransferase ASHH2, putative, expressed | - |
| 19 | Sobic.001G287500 | heat shock protein DnaJ, putative, expressed | K09533: DnaJ homolog subfamily C member 13 |
| 20 | Sobic.001G110600 | HEAT repeat family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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