Gene annotation
Transcriptome id Sobic.001G070600.1,Sobic.001G070600.2
Synonym Sb01g006380, FRS5
Functional annotation FAR1 family protein, expressed
UniProt C6JRN6 , A0A1Z5S507 , A0A1Z5S4Q5
Pfam PF04434 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os03g56630.1,LOC_Os03g56630.2 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU0Hr1G039600.4 , HORVU0Hr1G039600.5 , HORVU0Hr1G039600.6 , HORVU0Hr1G039600.7 , HORVU0Hr1G039600.1 , HORVU0Hr1G039600.2 , HORVU0Hr1G039600.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313900 rhoGAP domain containing protein, expressed -
2 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
3 Sobic.008G092532 - -
4 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
5 Sobic.001G540800 DNA binding protein, putative, expressed -
6 Sobic.009G084500 ethylene-responsive protein related, putative, expressed -
7 Sobic.002G148750 - -
8 Sobic.001G433300 SWIM zinc finger family protein, putative, expressed -
9 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
10 Sobic.004G086700 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
11 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
12 Sobic.007G054400 FAR1 family protein, expressed -
13 Sobic.003G083300 fatty acid hydroxylase, putative, expressed K00227: SC5DL, Delta7-sterol 5-desaturase
14 Sobic.006G050000 TBC domain containing protein, expressed -
15 Sobic.003G175100 OsWAK90 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.002G000700 expressed protein -
17 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
18 Sobic.006G036100 expressed protein K11266: MAternally affected uncoordination
19 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
20 Sobic.002G145000 DNA-directed RNA polymerase subunit, putative, expressed K03011: RPB3, DNA-directed RNA polymerase II subunit RPB3


Gene co-expression network
sample Sobic001G070600 Sobic001G070600 Sobic001G313900 Sobic001G313900 Sobic001G070600--Sobic001G313900 Sobic004G183800 Sobic004G183800 Sobic001G070600--Sobic004G183800 Sobic008G092532 Sobic008G092532 Sobic001G070600--Sobic008G092532 Sobic007G210000 Sobic007G210000 Sobic001G070600--Sobic007G210000 Sobic001G540800 Sobic001G540800 Sobic001G070600--Sobic001G540800 Sobic009G084500 Sobic009G084500 Sobic001G070600--Sobic009G084500 Sobic002G148750 Sobic002G148750 Sobic001G070600--Sobic002G148750 Sobic001G433300 Sobic001G433300 Sobic001G070600--Sobic001G433300 Sobic003G398700 Sobic003G398700 Sobic001G070600--Sobic003G398700 Sobic010G237900 Sobic010G237900 Sobic001G313900--Sobic010G237900 Sobic001G313900--Sobic001G070600 Sobic007G159900 Sobic007G159900 Sobic001G313900--Sobic007G159900 Sobic003G175100 Sobic003G175100 Sobic001G313900--Sobic003G175100 Sobic004G129300 Sobic004G129300 Sobic001G313900--Sobic004G129300 Sobic008G145800 Sobic008G145800 Sobic001G313900--Sobic008G145800 Sobic001G250700 Sobic001G250700 Sobic001G313900--Sobic001G250700 Sobic006G063001 Sobic006G063001 Sobic001G313900--Sobic006G063001 Sobic001G313900--Sobic002G148750 Sobic010G189200 Sobic010G189200 Sobic004G183800--Sobic010G189200 Sobic004G210900 Sobic004G210900 Sobic004G183800--Sobic004G210900 Sobic005G175500 Sobic005G175500 Sobic004G183800--Sobic005G175500 Sobic010G109600 Sobic010G109600 Sobic004G183800--Sobic010G109600 Sobic001G043800 Sobic001G043800 Sobic004G183800--Sobic001G043800 Sobic001G300100 Sobic001G300100 Sobic004G183800--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic004G183800--Sobic009G193500 Sobic008G063200 Sobic008G063200 Sobic004G183800--Sobic008G063200 Sobic002G276100 Sobic002G276100 Sobic004G183800--Sobic002G276100 Sobic001G227200 Sobic001G227200 Sobic008G092532--Sobic001G227200 Sobic004G258700 Sobic004G258700 Sobic008G092532--Sobic004G258700 Sobic007G054400 Sobic007G054400 Sobic008G092532--Sobic007G054400 Sobic010G277500 Sobic010G277500 Sobic008G092532--Sobic010G277500 Sobic003G101500 Sobic003G101500 Sobic008G092532--Sobic003G101500 Sobic010G172000 Sobic010G172000 Sobic008G092532--Sobic010G172000 Sobic007G225800 Sobic007G225800 Sobic008G092532--Sobic007G225800 Sobic008G092532--Sobic007G210000 Sobic004G107200 Sobic004G107200 Sobic008G092532--Sobic004G107200 Sobic007G210000--Sobic008G092532 Sobic002G431400 Sobic002G431400 Sobic007G210000--Sobic002G431400 Sobic007G210000--Sobic004G107200 Sobic004G019500 Sobic004G019500 Sobic007G210000--Sobic004G019500 Sobic008G047700 Sobic008G047700 Sobic007G210000--Sobic008G047700 Sobic001G253200 Sobic001G253200 Sobic007G210000--Sobic001G253200 Sobic007G210000--Sobic007G054400 Sobic010G140400 Sobic010G140400 Sobic007G210000--Sobic010G140400 Sobic001G261900 Sobic001G261900 Sobic007G210000--Sobic001G261900 Sobic006G036100 Sobic006G036100 Sobic001G540800--Sobic006G036100 Sobic002G425500 Sobic002G425500 Sobic001G540800--Sobic002G425500 Sobic002G145800 Sobic002G145800 Sobic001G540800--Sobic002G145800 Sobic010G145800 Sobic010G145800 Sobic001G540800--Sobic010G145800 Sobic001G540800--Sobic004G019500 Sobic001G540800--Sobic001G227200 Sobic006G269800 Sobic006G269800 Sobic001G540800--Sobic006G269800 Sobic001G020000 Sobic001G020000 Sobic001G540800--Sobic001G020000 Sobic002G309200 Sobic002G309200 Sobic001G540800--Sobic002G309200 Sobic004G269000 Sobic004G269000 Sobic009G084500--Sobic004G269000 Sobic005G100600 Sobic005G100600 Sobic009G084500--Sobic005G100600 Sobic007G136800 Sobic007G136800 Sobic009G084500--Sobic007G136800 Sobic001G332500 Sobic001G332500 Sobic009G084500--Sobic001G332500 Sobic006G173600 Sobic006G173600 Sobic009G084500--Sobic006G173600 Sobic004G174400 Sobic004G174400 Sobic009G084500--Sobic004G174400 Sobic010G186000 Sobic010G186000 Sobic009G084500--Sobic010G186000 Sobic006G092000 Sobic006G092000 Sobic009G084500--Sobic006G092000 Sobic001G048100 Sobic001G048100 Sobic009G084500--Sobic001G048100 Sobic009G002300 Sobic009G002300 Sobic002G148750--Sobic009G002300 Sobic003G217900 Sobic003G217900 Sobic002G148750--Sobic003G217900 Sobic003G155300 Sobic003G155300 Sobic002G148750--Sobic003G155300 Sobic009G129100 Sobic009G129100 Sobic002G148750--Sobic009G129100 Sobic003G217700 Sobic003G217700 Sobic002G148750--Sobic003G217700 Sobic009G132700 Sobic009G132700 Sobic002G148750--Sobic009G132700 Sobic002G148750--Sobic007G159900 Sobic002G148750--Sobic010G140400 Sobic002G148750--Sobic007G136800 Sobic001G433300--Sobic007G054400 Sobic001G433300--Sobic001G253200 Sobic001G433300--Sobic003G101500 Sobic003G438900 Sobic003G438900 Sobic001G433300--Sobic003G438900 Sobic005G079800 Sobic005G079800 Sobic001G433300--Sobic005G079800 Sobic004G039200 Sobic004G039200 Sobic001G433300--Sobic004G039200 Sobic008G113100 Sobic008G113100 Sobic001G433300--Sobic008G113100 Sobic004G264300 Sobic004G264300 Sobic001G433300--Sobic004G264300 Sobic003G293200 Sobic003G293200 Sobic001G433300--Sobic003G293200 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic001G456900 Sobic001G456900 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic010G021500 Sobic010G021500 Sobic003G398700--Sobic010G021500 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000
Octagon: transcription factors


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