Gene annotation
Transcriptome id Sobic.003G083300.1
Synonym Sb03g007010, DWF7, STE1, BUL1
Functional annotation fatty acid hydroxylase, putative, expressed
UniProt C5XQT4
Pfam PF04116
Panther DB PTHR11863 PTHR11863:SF33
NCBI CDD KOG0872; Sterol C5 desaturase
KEGG Orthology K00227; SC5DL, Delta7-sterol 5-desaturase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G02580 : sterol 1
RAP-DB (Rice) LOC_Os01g04260.1 : fatty acid hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a023579 , Zm00025a035573
Brachypodium KQK02562
Barley HORVU3Hr1G007280.2 , HORVU3Hr1G007280.3 , HORVU3Hr1G007280.1
Wheat TraesCS3B02G046100 , TraesCS3A02G037600 , TraesCS3D02G041900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
2 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
3 Sobic.007G150100 HD domain containing protein, putative, expressed -
4 Sobic.009G084500 ethylene-responsive protein related, putative, expressed -
5 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
6 Sobic.010G186000 expressed protein -
7 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
8 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
9 Sobic.001G070600 FAR1 family protein, expressed -
10 Sobic.002G091600 methyltransferase, putative, expressed -
11 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
12 Sobic.008G070800 expressed protein -
13 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
14 Sobic.003G193700 carbamoyl-phosphate synthase large chain, putative, expressed K01955: carB, carbamoyl-phosphate synthase large subunit
15 Sobic.003G319800 bHelix-loop-helix transcription factor, putative, expressed -
16 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
18 Sobic.003G219200 MEE18, putative, expressed -
19 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
20 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase


Gene co-expression network
sample Sobic003G083300 Sobic003G083300 Sobic005G100600 Sobic005G100600 Sobic003G083300--Sobic005G100600 Sobic006G173600 Sobic006G173600 Sobic003G083300--Sobic006G173600 Sobic007G150100 Sobic007G150100 Sobic003G083300--Sobic007G150100 Sobic009G084500 Sobic009G084500 Sobic003G083300--Sobic009G084500 SobicK031800 SobicK031800 Sobic003G083300--SobicK031800 Sobic010G186000 Sobic010G186000 Sobic003G083300--Sobic010G186000 Sobic001G261545 Sobic001G261545 Sobic003G083300--Sobic001G261545 Sobic006G038500 Sobic006G038500 Sobic003G083300--Sobic006G038500 Sobic001G070600 Sobic001G070600 Sobic003G083300--Sobic001G070600 Sobic006G092000 Sobic006G092000 Sobic005G100600--Sobic006G092000 Sobic007G136800 Sobic007G136800 Sobic005G100600--Sobic007G136800 Sobic001G085600 Sobic001G085600 Sobic005G100600--Sobic001G085600 Sobic003G110800 Sobic003G110800 Sobic005G100600--Sobic003G110800 Sobic001G465700 Sobic001G465700 Sobic005G100600--Sobic001G465700 Sobic005G100600--Sobic006G038500 Sobic005G100600--Sobic006G173600 Sobic005G100600--Sobic001G261545 Sobic002G091600 Sobic002G091600 Sobic005G100600--Sobic002G091600 Sobic006G173600--Sobic007G150100 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic001G003200 Sobic001G003200 Sobic007G150100--Sobic001G003200 Sobic007G150100--Sobic006G173600 Sobic001G048400 Sobic001G048400 Sobic007G150100--Sobic001G048400 Sobic001G504400 Sobic001G504400 Sobic007G150100--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic007G150100--Sobic010G043800 Sobic009G056700 Sobic009G056700 Sobic007G150100--Sobic009G056700 Sobic001G169900 Sobic001G169900 Sobic007G150100--Sobic001G169900 Sobic003G398800 Sobic003G398800 Sobic007G150100--Sobic003G398800 Sobic007G150100--Sobic003G110800 Sobic004G269000 Sobic004G269000 Sobic009G084500--Sobic004G269000 Sobic009G084500--Sobic005G100600 Sobic009G084500--Sobic007G136800 Sobic001G332500 Sobic001G332500 Sobic009G084500--Sobic001G332500 Sobic009G084500--Sobic006G173600 Sobic004G174400 Sobic004G174400 Sobic009G084500--Sobic004G174400 Sobic009G084500--Sobic010G186000 Sobic009G084500--Sobic006G092000 Sobic001G048100 Sobic001G048100 Sobic009G084500--Sobic001G048100 SobicK031800--Sobic003G219200 Sobic008G188600 Sobic008G188600 SobicK031800--Sobic008G188600 Sobic003G387100 Sobic003G387100 SobicK031800--Sobic003G387100 Sobic009G175500 Sobic009G175500 SobicK031800--Sobic009G175500 Sobic005G149400 Sobic005G149400 SobicK031800--Sobic005G149400 Sobic004G336200 Sobic004G336200 SobicK031800--Sobic004G336200 Sobic010G035400 Sobic010G035400 SobicK031800--Sobic010G035400 Sobic002G275300 Sobic002G275300 SobicK031800--Sobic002G275300 Sobic006G102000 Sobic006G102000 SobicK031800--Sobic006G102000 Sobic008G070800 Sobic008G070800 Sobic010G186000--Sobic008G070800 Sobic004G086700 Sobic004G086700 Sobic010G186000--Sobic004G086700 Sobic010G186000--Sobic002G091600 Sobic010G186000--Sobic007G136800 Sobic002G383800 Sobic002G383800 Sobic010G186000--Sobic002G383800 Sobic010G186000--Sobic009G084500 Sobic004G040900 Sobic004G040900 Sobic010G186000--Sobic004G040900 Sobic002G131200 Sobic002G131200 Sobic010G186000--Sobic002G131200 Sobic010G186000--Sobic003G110800 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic002G347600 Sobic002G347600 Sobic006G038500--Sobic002G347600 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic001G126300 Sobic001G126300 Sobic006G038500--Sobic001G126300 Sobic003G141100 Sobic003G141100 Sobic006G038500--Sobic003G141100 Sobic006G128300 Sobic006G128300 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic001G313900 Sobic001G313900 Sobic001G070600--Sobic001G313900 Sobic004G183800 Sobic004G183800 Sobic001G070600--Sobic004G183800 Sobic008G092532 Sobic008G092532 Sobic001G070600--Sobic008G092532 Sobic007G210000 Sobic007G210000 Sobic001G070600--Sobic007G210000 Sobic001G540800 Sobic001G540800 Sobic001G070600--Sobic001G540800 Sobic001G070600--Sobic009G084500 Sobic002G148750 Sobic002G148750 Sobic001G070600--Sobic002G148750 Sobic001G433300 Sobic001G433300 Sobic001G070600--Sobic001G433300 Sobic003G398700 Sobic003G398700 Sobic001G070600--Sobic003G398700
Octagon: transcription factors


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