Gene annotation
Transcriptome id Sobic.003G222500.1
Synonym Sb03g028080, PGM1, ATPGMP, PGM, STF1
Functional annotation phosphoglucomutase, putative, expressed
UniProt C5XR33
Pfam PF00408 PF02879 PF02880 PF02878
Panther DB PTHR22573 PTHR22573:SF2
NCBI CDD -
KEGG Orthology K01835; phosphoglucomutase
Gene Ontology GO:0016868; intramolecular transferase activity, phosphotransferases GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G51820 : phosphoglucomutase
RAP-DB (Rice) LOC_Os10g11140.1 : phosphoglucomutase, putative, expressed
MaizeGDB (Corn) Zm00025a028396
Brachypodium KQJ96408
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G222500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
2 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
3 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
4 Sobic.002G065200 pentatricopeptide, putative, expressed -
5 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.002G288300 Chorophyll a/b binding protein 1(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
7 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
8 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
9 Sobic.004G012900 expressed protein -
10 Sobic.004G335800 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
11 Sobic.001G023700 expressed protein -
12 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
13 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
14 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
15 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
17 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
18 Sobic.010G011800 OsFBO18 - F-box and other domain containing protein, expressed -
19 Sobic.001G531200 methylthioribose kinase, putative, expressed -
20 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11


Gene co-expression network
sample Sobic003G222500 Sobic003G222500 Sobic004G175500 Sobic004G175500 Sobic003G222500--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic003G222500--Sobic003G387800 Sobic002G198600 Sobic002G198600 Sobic003G222500--Sobic002G198600 Sobic002G065200 Sobic002G065200 Sobic003G222500--Sobic002G065200 Sobic004G183100 Sobic004G183100 Sobic003G222500--Sobic004G183100 Sobic002G288300 Sobic002G288300 Sobic003G222500--Sobic002G288300 Sobic009G030900 Sobic009G030900 Sobic003G222500--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic003G222500--Sobic010G005500 Sobic004G012900 Sobic004G012900 Sobic003G222500--Sobic004G012900 Sobic004G175500--Sobic003G387800 Sobic004G343300 Sobic004G343300 Sobic004G175500--Sobic004G343300 Sobic007G004800 Sobic007G004800 Sobic004G175500--Sobic007G004800 Sobic004G175500--Sobic002G198600 Sobic004G249800 Sobic004G249800 Sobic004G175500--Sobic004G249800 Sobic007G071500 Sobic007G071500 Sobic004G175500--Sobic007G071500 Sobic001G029100 Sobic001G029100 Sobic004G175500--Sobic001G029100 Sobic006G103400 Sobic006G103400 Sobic004G175500--Sobic006G103400 Sobic004G175500--Sobic009G030900 Sobic003G387800--Sobic004G175500 Sobic003G387800--Sobic007G004800 Sobic003G002300 Sobic003G002300 Sobic003G387800--Sobic003G002300 Sobic009G140600 Sobic009G140600 Sobic003G387800--Sobic009G140600 Sobic003G387800--Sobic010G005500 Sobic003G387800--Sobic009G030900 Sobic007G052400 Sobic007G052400 Sobic003G387800--Sobic007G052400 Sobic009G143100 Sobic009G143100 Sobic003G387800--Sobic009G143100 Sobic008G134800 Sobic008G134800 Sobic003G387800--Sobic008G134800 Sobic003G433900 Sobic003G433900 Sobic002G198600--Sobic003G433900 Sobic002G198600--Sobic004G175500 Sobic009G091800 Sobic009G091800 Sobic002G198600--Sobic009G091800 Sobic003G132100 Sobic003G132100 Sobic002G198600--Sobic003G132100 Sobic003G386300 Sobic003G386300 Sobic002G198600--Sobic003G386300 Sobic002G198600--Sobic009G030900 Sobic006G248200 Sobic006G248200 Sobic002G198600--Sobic006G248200 Sobic010G011800 Sobic010G011800 Sobic002G198600--Sobic010G011800 Sobic004G311100 Sobic004G311100 Sobic002G198600--Sobic004G311100 Sobic002G065200--Sobic002G198600 Sobic008G063500 Sobic008G063500 Sobic002G065200--Sobic008G063500 Sobic002G065200--Sobic010G011800 Sobic002G065200--Sobic004G175500 Sobic004G227200 Sobic004G227200 Sobic002G065200--Sobic004G227200 Sobic002G065200--Sobic001G029100 Sobic002G316700 Sobic002G316700 Sobic002G065200--Sobic002G316700 Sobic001G177000 Sobic001G177000 Sobic002G065200--Sobic001G177000 Sobic002G065200--Sobic002G288300 Sobic008G119250 Sobic008G119250 Sobic004G183100--Sobic008G119250 Sobic004G183100--Sobic004G311100 Sobic004G183100--Sobic002G198600 Sobic004G183100--Sobic009G030900 Sobic004G183100--Sobic001G029100 Sobic004G183100--Sobic003G222500 Sobic001G308800 Sobic001G308800 Sobic004G183100--Sobic001G308800 Sobic001G104800 Sobic001G104800 Sobic004G183100--Sobic001G104800 Sobic009G183700 Sobic009G183700 Sobic004G183100--Sobic009G183700 Sobic002G288300--Sobic009G091800 Sobic010G022100 Sobic010G022100 Sobic002G288300--Sobic010G022100 Sobic010G000500 Sobic010G000500 Sobic002G288300--Sobic010G000500 Sobic004G234200 Sobic004G234200 Sobic002G288300--Sobic004G234200 Sobic002G338000 Sobic002G338000 Sobic002G288300--Sobic002G338000 Sobic002G414400 Sobic002G414400 Sobic002G288300--Sobic002G414400 Sobic002G288300--Sobic010G011800 Sobic004G193400 Sobic004G193400 Sobic002G288300--Sobic004G193400 Sobic006G264900 Sobic006G264900 Sobic002G288300--Sobic006G264900 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G059300 Sobic009G059300 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic009G030900--Sobic004G175500 Sobic010G005500--Sobic007G052400 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic010G005500--Sobic002G277100 Sobic010G005500--Sobic003G387800 Sobic010G005500--Sobic004G012900 Sobic010G005500--Sobic010G277600 Sobic010G005500--Sobic009G059300 Sobic004G012900--Sobic007G052400 Sobic002G233700 Sobic002G233700 Sobic004G012900--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic004G012900--Sobic002G401800 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic004G012900--Sobic009G059300 Sobic004G012900--Sobic010G277600 Sobic003G387100 Sobic003G387100 Sobic004G012900--Sobic003G387100 Sobic004G012900--Sobic008G171300
Octagon: transcription factors


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