Gene annotation
Transcriptome id Sobic.001G286500.1,Sobic.001G286500.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QLR0
Pfam -
Panther DB PTHR18460
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79190 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os10g42510.1 : expressed protein
MaizeGDB (Corn) Zm00025a041328 , Zm00025a055076 , Zm00025a018064 , Zm00025a055075 , Zm00025a017190 , Zm00025a045586 , Zm00025a026634 , Zm00025a057929 , Zm00025a056113 , Zm00025a042124 , Zm00025a020078 , Zm00025a049496
Brachypodium PNT67970 , KQJ97972 , KQJ97970 , KQJ97971 , PNT67969 , KQJ97969
Barley HORVU1Hr1G050650.19 , HORVU1Hr1G050650.18 , HORVU1Hr1G050650.13 , HORVU1Hr1G050650.12 , HORVU1Hr1G050650.11 , HORVU1Hr1G050650.10 , HORVU1Hr1G050650.17 , HORVU1Hr1G050650.16 , HORVU1Hr1G050650.15 , HORVU1Hr1G050650.14 , HORVU1Hr1G050650.9 , HORVU1Hr1G050650.8 , HORVU1Hr1G050650.3 , HORVU1Hr1G050650.2 , HORVU1Hr1G050650.1 , HORVU1Hr1G050650.7 , HORVU1Hr1G050650.6 , HORVU1Hr1G050650.5 , HORVU1Hr1G050650.4 , HORVU1Hr1G050650.35 , HORVU1Hr1G050650.34 , HORVU1Hr1G050650.37 , HORVU1Hr1G050650.36 , HORVU1Hr1G050650.31 , HORVU1Hr1G050650.30 , HORVU1Hr1G050650.33 , HORVU1Hr1G050650.32 , HORVU1Hr1G050650.22 , HORVU1Hr1G050650.23 , HORVU1Hr1G050650.20 , HORVU1Hr1G050650.21 , HORVU1Hr1G050650.26 , HORVU1Hr1G050650.27 , HORVU1Hr1G050650.24 , HORVU1Hr1G050650.25 , HORVU1Hr1G050650.28 , HORVU1Hr1G050650.29
Wheat TraesCS1A02G193600 , TraesCS1D02G197500 , TraesCS1B02G208600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G399800 PWWP domain containing protein, expressed -
2 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
3 Sobic.006G125500 expressed protein -
4 Sobic.010G174700 expressed protein -
5 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
6 Sobic.001G393900 FAD binding domain containing protein, expressed -
7 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
8 Sobic.003G441900 Leucine Rich Repeat family protein, expressed -
9 Sobic.002G372500 exportin 1, putative, expressed K14288: exportin-T
10 Sobic.008G002500 RCD1, putative, expressed -
11 Sobic.006G040800 expressed protein -
12 Sobic.010G115400 pentatricopeptide, putative, expressed -
13 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
14 Sobic.007G018400 expressed protein -
15 Sobic.004G332400 neurochondrin family protein, putative, expressed -
16 Sobic.003G052800 RST1, putative, expressed -
17 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
18 Sobic.001G288700 armadillo/beta-catenin-like repeat containing protein, expressed -
19 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
20 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6


Gene co-expression network
sample Sobic001G286500 Sobic001G286500 Sobic002G399800 Sobic002G399800 Sobic001G286500--Sobic002G399800 Sobic006G267600 Sobic006G267600 Sobic001G286500--Sobic006G267600 Sobic006G125500 Sobic006G125500 Sobic001G286500--Sobic006G125500 Sobic010G174700 Sobic010G174700 Sobic001G286500--Sobic010G174700 Sobic004G040200 Sobic004G040200 Sobic001G286500--Sobic004G040200 Sobic001G393900 Sobic001G393900 Sobic001G286500--Sobic001G393900 Sobic010G080700 Sobic010G080700 Sobic001G286500--Sobic010G080700 Sobic003G441900 Sobic003G441900 Sobic001G286500--Sobic003G441900 Sobic002G372500 Sobic002G372500 Sobic001G286500--Sobic002G372500 Sobic003G095900 Sobic003G095900 Sobic002G399800--Sobic003G095900 Sobic003G260400 Sobic003G260400 Sobic002G399800--Sobic003G260400 Sobic010G079500 Sobic010G079500 Sobic002G399800--Sobic010G079500 Sobic004G248600 Sobic004G248600 Sobic002G399800--Sobic004G248600 Sobic002G179400 Sobic002G179400 Sobic002G399800--Sobic002G179400 Sobic002G133300 Sobic002G133300 Sobic002G399800--Sobic002G133300 Sobic001G089600 Sobic001G089600 Sobic002G399800--Sobic001G089600 Sobic002G399800--Sobic001G393900 Sobic009G109200 Sobic009G109200 Sobic002G399800--Sobic009G109200 Sobic006G261400 Sobic006G261400 Sobic006G267600--Sobic006G261400 Sobic001G051700 Sobic001G051700 Sobic006G267600--Sobic001G051700 Sobic006G267600--Sobic001G393900 Sobic002G154000 Sobic002G154000 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic002G048700 Sobic002G048700 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic003G416700 Sobic003G416700 Sobic006G267600--Sobic003G416700 Sobic003G308500 Sobic003G308500 Sobic006G125500--Sobic003G308500 Sobic004G224600 Sobic004G224600 Sobic006G125500--Sobic004G224600 Sobic006G002800 Sobic006G002800 Sobic006G125500--Sobic006G002800 Sobic003G146600 Sobic003G146600 Sobic006G125500--Sobic003G146600 Sobic002G371600 Sobic002G371600 Sobic006G125500--Sobic002G371600 Sobic006G125500--Sobic010G080700 Sobic004G332400 Sobic004G332400 Sobic006G125500--Sobic004G332400 Sobic007G155500 Sobic007G155500 Sobic006G125500--Sobic007G155500 Sobic005G010900 Sobic005G010900 Sobic006G125500--Sobic005G010900 Sobic006G036100 Sobic006G036100 Sobic010G174700--Sobic006G036100 Sobic001G352900 Sobic001G352900 Sobic010G174700--Sobic001G352900 Sobic010G174700--Sobic001G089600 Sobic001G052400 Sobic001G052400 Sobic010G174700--Sobic001G052400 Sobic002G145800 Sobic002G145800 Sobic010G174700--Sobic002G145800 Sobic001G451300 Sobic001G451300 Sobic010G174700--Sobic001G451300 Sobic010G053600 Sobic010G053600 Sobic010G174700--Sobic010G053600 Sobic001G453400 Sobic001G453400 Sobic010G174700--Sobic001G453400 Sobic005G220000 Sobic005G220000 Sobic010G174700--Sobic005G220000 Sobic004G040200--Sobic004G332400 Sobic006G040800 Sobic006G040800 Sobic004G040200--Sobic006G040800 Sobic004G040200--Sobic002G048700 Sobic008G002500 Sobic008G002500 Sobic004G040200--Sobic008G002500 Sobic009G255600 Sobic009G255600 Sobic004G040200--Sobic009G255600 Sobic002G361400 Sobic002G361400 Sobic004G040200--Sobic002G361400 Sobic007G225100 Sobic007G225100 Sobic004G040200--Sobic007G225100 Sobic004G040200--Sobic001G051700 Sobic004G123400 Sobic004G123400 Sobic004G040200--Sobic004G123400 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic001G393900--Sobic006G267600 Sobic001G393900--Sobic001G089600 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic006G269800 Sobic006G269800 Sobic001G393900--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic003G375200 Sobic003G375200 Sobic010G080700--Sobic003G375200 Sobic003G221400 Sobic003G221400 Sobic010G080700--Sobic003G221400 Sobic005G162500 Sobic005G162500 Sobic010G080700--Sobic005G162500 Sobic010G080700--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic010G080700--Sobic010G059500 Sobic010G080700--Sobic001G089600 Sobic008G124800 Sobic008G124800 Sobic010G080700--Sobic008G124800 Sobic010G080700--Sobic004G322400 Sobic004G131300 Sobic004G131300 Sobic010G080700--Sobic004G131300 Sobic005G167700 Sobic005G167700 Sobic003G441900--Sobic005G167700 Sobic001G433800 Sobic001G433800 Sobic003G441900--Sobic001G433800 Sobic003G441900--Sobic002G133300 Sobic010G123600 Sobic010G123600 Sobic003G441900--Sobic010G123600 Sobic001G151100 Sobic001G151100 Sobic003G441900--Sobic001G151100 Sobic004G276400 Sobic004G276400 Sobic003G441900--Sobic004G276400 Sobic001G020000 Sobic001G020000 Sobic003G441900--Sobic001G020000 Sobic004G334300 Sobic004G334300 Sobic003G441900--Sobic004G334300 Sobic001G194200 Sobic001G194200 Sobic003G441900--Sobic001G194200 Sobic001G429600 Sobic001G429600 Sobic002G372500--Sobic001G429600 Sobic001G461300 Sobic001G461300 Sobic002G372500--Sobic001G461300 Sobic003G052800 Sobic003G052800 Sobic002G372500--Sobic003G052800 Sobic001G373000 Sobic001G373000 Sobic002G372500--Sobic001G373000 Sobic002G372500--Sobic006G269800 Sobic002G372500--Sobic001G451300 Sobic002G372500--Sobic010G174700 Sobic008G147200 Sobic008G147200 Sobic002G372500--Sobic008G147200 Sobic003G199300 Sobic003G199300 Sobic002G372500--Sobic003G199300
Octagon: transcription factors


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