Gene annotation
Transcriptome id Sobic.006G030100.3
Synonym GK, EMB22, AT-ACC1, ACC1, Sb06g003090, PAS3
Functional annotation acetyl-CoA carboxylase, putative, expressed
UniProt C5YD68
Pfam PF00364 PF13535 PF02785 PF00289 PF08326 PF01039
Panther DB PTHR18866 PTHR18866:SF106
NCBI CDD -
KEGG Orthology K11262; acetyl-CoA carboxylase / biotin carboxylase 1
Gene Ontology GO:0006633; fatty acid biosynthetic process GO:0005524ATP binding GO:0003989acetyl-CoA carboxylase activity


Orthologs (automatic annotation)
TAIR AT1G36180 : acetyl-CoA carboxylase 2
RAP-DB (Rice) LOC_Os05g22940.1 : acetyl-CoA carboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a055572 , Zm00025a011955
Brachypodium KQJ81927
Barley HORVU2Hr1G010440.11 , HORVU2Hr1G010440.10 , HORVU2Hr1G010440.13 , HORVU2Hr1G010440.12 , HORVU2Hr1G010440.15 , HORVU2Hr1G010440.14 , HORVU2Hr1G010440.17 , HORVU2Hr1G010440.16 , HORVU2Hr1G010440.19 , HORVU2Hr1G010440.18 , HORVU2Hr1G010440.42 , HORVU2Hr1G010440.43 , HORVU2Hr1G010440.40 , HORVU2Hr1G010440.41 , HORVU2Hr1G010440.46 , HORVU2Hr1G010440.44 , HORVU2Hr1G010440.45 , HORVU2Hr1G010440.5 , HORVU2Hr1G010440.4 , HORVU2Hr1G010440.7 , HORVU2Hr1G010440.6 , HORVU2Hr1G010440.1 , HORVU2Hr1G010440.3 , HORVU2Hr1G010440.2 , HORVU2Hr1G010440.9 , HORVU2Hr1G010440.8 , HORVU2Hr1G010440.39 , HORVU2Hr1G010440.38 , HORVU2Hr1G010440.37 , HORVU2Hr1G010440.36 , HORVU2Hr1G010440.35 , HORVU2Hr1G010440.33 , HORVU2Hr1G010440.32 , HORVU2Hr1G010440.31 , HORVU2Hr1G010440.30 , HORVU2Hr1G010440.34 , HORVU2Hr1G010440.28 , HORVU2Hr1G010440.29 , HORVU2Hr1G010440.24 , HORVU2Hr1G010440.25 , HORVU2Hr1G010440.26 , HORVU2Hr1G010440.27 , HORVU2Hr1G010440.20 , HORVU2Hr1G010440.21 , HORVU2Hr1G010440.22 , HORVU2Hr1G010440.23
Wheat TraesCS3D02G479900 , TraesCS3B02G532000 , TraesCS2B02G082500 , TraesCS3A02G484800 , TraesCS2A02G069400 , TraesCS2D02G068100
Populus PNT48738 , PNT37102 , PNT37078 , PNT37077


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G254600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized oxidoreductase, putative, expressed -
2 Sobic.003G155300 dihydrolipoyl dehydrogenase, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
3 Sobic.006G050000 TBC domain containing protein, expressed -
4 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
5 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
6 Sobic.003G418200 spermatogenesis-associated protein 20 precursor, putative, expressed -
7 Sobic.003G222500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
8 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
9 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
10 Sobic.003G193700 carbamoyl-phosphate synthase large chain, putative, expressed K01955: carB, carbamoyl-phosphate synthase large subunit
11 Sobic.007G197450 - -
12 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
13 Sobic.004G079800 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
14 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
15 Sobic.004G343900 expressed protein -
16 Sobic.009G093900 rhodanese-like domain containing protein, putative, expressed -
17 Sobic.001G288700 armadillo/beta-catenin-like repeat containing protein, expressed -
18 Sobic.001G168250 - -
19 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
20 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase


Gene co-expression network
sample Sobic006G030100 Sobic006G030100 Sobic001G254600 Sobic001G254600 Sobic006G030100--Sobic001G254600 Sobic003G155300 Sobic003G155300 Sobic006G030100--Sobic003G155300 Sobic006G050000 Sobic006G050000 Sobic006G030100--Sobic006G050000 Sobic009G063100 Sobic009G063100 Sobic006G030100--Sobic009G063100 Sobic009G129100 Sobic009G129100 Sobic006G030100--Sobic009G129100 Sobic003G418200 Sobic003G418200 Sobic006G030100--Sobic003G418200 Sobic003G222500 Sobic003G222500 Sobic006G030100--Sobic003G222500 Sobic004G016400 Sobic004G016400 Sobic006G030100--Sobic004G016400 Sobic007G070000 Sobic007G070000 Sobic006G030100--Sobic007G070000 Sobic001G254600--Sobic006G030100 Sobic006G261700 Sobic006G261700 Sobic001G254600--Sobic006G261700 Sobic001G254600--Sobic003G222500 Sobic001G254600--Sobic003G418200 Sobic006G132000 Sobic006G132000 Sobic001G254600--Sobic006G132000 Sobic001G333500 Sobic001G333500 Sobic001G254600--Sobic001G333500 Sobic004G343900 Sobic004G343900 Sobic001G254600--Sobic004G343900 Sobic004G331700 Sobic004G331700 Sobic001G254600--Sobic004G331700 Sobic008G171300 Sobic008G171300 Sobic001G254600--Sobic008G171300 Sobic003G155300--Sobic009G129100 Sobic002G148750 Sobic002G148750 Sobic003G155300--Sobic002G148750 Sobic002G293600 Sobic002G293600 Sobic003G155300--Sobic002G293600 Sobic001G227200 Sobic001G227200 Sobic003G155300--Sobic001G227200 Sobic003G149300 Sobic003G149300 Sobic003G155300--Sobic003G149300 Sobic004G185800 Sobic004G185800 Sobic003G155300--Sobic004G185800 Sobic002G425500 Sobic002G425500 Sobic003G155300--Sobic002G425500 Sobic006G194400 Sobic006G194400 Sobic003G155300--Sobic006G194400 Sobic008G092532 Sobic008G092532 Sobic003G155300--Sobic008G092532 Sobic001G145000 Sobic001G145000 Sobic006G050000--Sobic001G145000 Sobic006G050000--Sobic009G129100 Sobic006G038500 Sobic006G038500 Sobic006G050000--Sobic006G038500 Sobic006G256600 Sobic006G256600 Sobic006G050000--Sobic006G256600 Sobic001G465700 Sobic001G465700 Sobic006G050000--Sobic001G465700 Sobic004G054400 Sobic004G054400 Sobic006G050000--Sobic004G054400 Sobic002G431300 Sobic002G431300 Sobic006G050000--Sobic002G431300 Sobic004G263400 Sobic004G263400 Sobic006G050000--Sobic004G263400 Sobic003G193700 Sobic003G193700 Sobic006G050000--Sobic003G193700 Sobic010G023700 Sobic010G023700 Sobic009G063100--Sobic010G023700 Sobic007G140800 Sobic007G140800 Sobic009G063100--Sobic007G140800 Sobic001G129000 Sobic001G129000 Sobic009G063100--Sobic001G129000 Sobic010G188600 Sobic010G188600 Sobic009G063100--Sobic010G188600 Sobic004G274100 Sobic004G274100 Sobic009G063100--Sobic004G274100 Sobic006G207800 Sobic006G207800 Sobic009G063100--Sobic006G207800 Sobic007G029700 Sobic007G029700 Sobic009G063100--Sobic007G029700 Sobic001G102800 Sobic001G102800 Sobic009G063100--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic009G063100--Sobic009G237100 Sobic003G168100 Sobic003G168100 Sobic009G129100--Sobic003G168100 Sobic005G167700 Sobic005G167700 Sobic009G129100--Sobic005G167700 Sobic003G067100 Sobic003G067100 Sobic009G129100--Sobic003G067100 Sobic010G126000 Sobic010G126000 Sobic009G129100--Sobic010G126000 Sobic003G234900 Sobic003G234900 Sobic009G129100--Sobic003G234900 Sobic003G120300 Sobic003G120300 Sobic009G129100--Sobic003G120300 Sobic001G275300 Sobic001G275300 Sobic009G129100--Sobic001G275300 Sobic009G129100--Sobic004G185800 Sobic009G132700 Sobic009G132700 Sobic009G129100--Sobic009G132700 Sobic003G418200--Sobic001G254600 Sobic003G418200--Sobic006G030100 Sobic007G100500 Sobic007G100500 Sobic003G418200--Sobic007G100500 Sobic003G404000 Sobic003G404000 Sobic003G418200--Sobic003G404000 Sobic001G290600 Sobic001G290600 Sobic003G418200--Sobic001G290600 Sobic010G155600 Sobic010G155600 Sobic003G418200--Sobic010G155600 Sobic003G433300 Sobic003G433300 Sobic003G418200--Sobic003G433300 Sobic001G283300 Sobic001G283300 Sobic003G418200--Sobic001G283300 Sobic002G366300 Sobic002G366300 Sobic003G418200--Sobic002G366300 Sobic004G175500 Sobic004G175500 Sobic003G222500--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic003G222500--Sobic003G387800 Sobic002G198600 Sobic002G198600 Sobic003G222500--Sobic002G198600 Sobic002G065200 Sobic002G065200 Sobic003G222500--Sobic002G065200 Sobic004G183100 Sobic004G183100 Sobic003G222500--Sobic004G183100 Sobic002G288300 Sobic002G288300 Sobic003G222500--Sobic002G288300 Sobic009G030900 Sobic009G030900 Sobic003G222500--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic003G222500--Sobic010G005500 Sobic004G012900 Sobic004G012900 Sobic003G222500--Sobic004G012900 Sobic005G149400 Sobic005G149400 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic003G387100 Sobic003G387100 Sobic004G016400--Sobic003G387100 Sobic004G307400 Sobic004G307400 Sobic004G016400--Sobic004G307400 Sobic004G016400--Sobic009G030900 Sobic001G309300 Sobic001G309300 Sobic004G016400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic004G016400--Sobic009G059300 Sobic004G336000 Sobic004G336000 Sobic004G016400--Sobic004G336000 Sobic001G291900 Sobic001G291900 Sobic004G016400--Sobic001G291900 Sobic003G311600 Sobic003G311600 Sobic007G070000--Sobic003G311600 Sobic002G340200 Sobic002G340200 Sobic007G070000--Sobic002G340200 Sobic010G134500 Sobic010G134500 Sobic007G070000--Sobic010G134500 Sobic008G088842 Sobic008G088842 Sobic007G070000--Sobic008G088842 Sobic003G223000 Sobic003G223000 Sobic007G070000--Sobic003G223000 Sobic001G300900 Sobic001G300900 Sobic007G070000--Sobic001G300900 Sobic010G091200 Sobic010G091200 Sobic007G070000--Sobic010G091200 Sobic004G354000 Sobic004G354000 Sobic007G070000--Sobic004G354000 Sobic006G275000 Sobic006G275000 Sobic007G070000--Sobic006G275000
Octagon: transcription factors


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