Gene annotation
Transcriptome id Sobic.003G224600.1
Synonym Sb03g028290
Functional annotation CPuORF17 - conserved peptide uORF-containing transcript, expressed
UniProt C5XR55
Pfam -
Panther DB PTHR31827 PTHR31827:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64140 : -
RAP-DB (Rice) LOC_Os01g43372.1 : expressed protein
MaizeGDB (Corn) Zm00025a028382
Brachypodium PNT72412 , PNT72413 , KQK08788 , KQK08789
Barley HORVU3Hr1G055650.2 , HORVU3Hr1G055650.3 , HORVU3Hr1G055650.1 , HORVU3Hr1G055650.6 , HORVU3Hr1G055650.7 , HORVU3Hr1G055650.4 , HORVU3Hr1G055650.5 , HORVU3Hr1G055650.8 , HORVU3Hr1G055650.9
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
2 Sobic.007G053100 amino acid permease family protein, putative, expressed -
3 Sobic.003G404000 Plant stearoyl-acyl-carrier-protein desaturase family protein(PubMedID : 26465154)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
4 Sobic.008G191850 - -
5 Sobic.004G033200 expressed protein -
6 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
7 Sobic.005G045700 PHD-finger family protein, expressed -
8 Sobic.003G418200 spermatogenesis-associated protein 20 precursor, putative, expressed -
9 Sobic.001G493500 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
11 Sobic.002G054400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.006G251500 inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed K10572: inositol-pentakisphosphate 2-kinase
13 Sobic.010G179300 - -
14 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
16 Sobic.004G290100 glutathione peroxidase, putative, expressed -
17 Sobic.001G125400 ethylene-insensitive protein, putative, expressed -
18 Sobic.002G366300 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.001G447200 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
20 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ


Gene co-expression network
sample Sobic003G224600 Sobic003G224600 Sobic010G170000 Sobic010G170000 Sobic003G224600--Sobic010G170000 Sobic007G053100 Sobic007G053100 Sobic003G224600--Sobic007G053100 Sobic003G404000 Sobic003G404000 Sobic003G224600--Sobic003G404000 Sobic008G191850 Sobic008G191850 Sobic003G224600--Sobic008G191850 Sobic004G033200 Sobic004G033200 Sobic003G224600--Sobic004G033200 Sobic004G066500 Sobic004G066500 Sobic003G224600--Sobic004G066500 Sobic005G045700 Sobic005G045700 Sobic003G224600--Sobic005G045700 Sobic003G418200 Sobic003G418200 Sobic003G224600--Sobic003G418200 Sobic001G493500 Sobic001G493500 Sobic003G224600--Sobic001G493500 Sobic003G427300 Sobic003G427300 Sobic010G170000--Sobic003G427300 Sobic010G170000--Sobic004G066500 Sobic010G170000--Sobic007G053100 Sobic010G077300 Sobic010G077300 Sobic010G170000--Sobic010G077300 Sobic006G251500 Sobic006G251500 Sobic010G170000--Sobic006G251500 Sobic010G170000--Sobic003G224600 Sobic010G170000--Sobic008G191850 Sobic010G170000--Sobic005G045700 Sobic002G266300 Sobic002G266300 Sobic010G170000--Sobic002G266300 Sobic007G053100--Sobic002G266300 Sobic007G053100--Sobic006G251500 Sobic006G053200 Sobic006G053200 Sobic007G053100--Sobic006G053200 Sobic001G125400 Sobic001G125400 Sobic007G053100--Sobic001G125400 Sobic007G053100--Sobic005G045700 Sobic007G053100--Sobic004G033200 Sobic007G053100--Sobic003G427300 Sobic007G053100--Sobic004G066500 Sobic002G127900 Sobic002G127900 Sobic007G053100--Sobic002G127900 Sobic001G125300 Sobic001G125300 Sobic003G404000--Sobic001G125300 Sobic010G012001 Sobic010G012001 Sobic003G404000--Sobic010G012001 Sobic003G404000--Sobic003G418200 Sobic001G480550 Sobic001G480550 Sobic003G404000--Sobic001G480550 Sobic003G404000--Sobic003G224600 Sobic002G366300 Sobic002G366300 Sobic003G404000--Sobic002G366300 Sobic002G391100 Sobic002G391100 Sobic003G404000--Sobic002G391100 Sobic002G393332 Sobic002G393332 Sobic003G404000--Sobic002G393332 Sobic002G118300 Sobic002G118300 Sobic003G404000--Sobic002G118300 Sobic008G191850--Sobic002G266300 Sobic008G191850--Sobic004G066500 Sobic005G021000 Sobic005G021000 Sobic008G191850--Sobic005G021000 Sobic001G534200 Sobic001G534200 Sobic008G191850--Sobic001G534200 Sobic002G010000 Sobic002G010000 Sobic008G191850--Sobic002G010000 Sobic006G217800 Sobic006G217800 Sobic008G191850--Sobic006G217800 Sobic001G336200 Sobic001G336200 Sobic008G191850--Sobic001G336200 Sobic004G347500 Sobic004G347500 Sobic008G191850--Sobic004G347500 Sobic008G191850--Sobic007G053100 Sobic004G033200--Sobic002G266300 Sobic004G033200--Sobic007G053100 Sobic004G033200--Sobic008G191850 Sobic010G024600 Sobic010G024600 Sobic004G033200--Sobic010G024600 Sobic004G033200--Sobic004G066500 Sobic001G508200 Sobic001G508200 Sobic004G033200--Sobic001G508200 Sobic009G052600 Sobic009G052600 Sobic004G033200--Sobic009G052600 Sobic008G116600 Sobic008G116600 Sobic004G033200--Sobic008G116600 Sobic004G033200--Sobic004G347500 Sobic004G066500--Sobic008G191850 Sobic004G066500--Sobic007G053100 Sobic004G066500--Sobic004G033200 Sobic004G066500--Sobic003G427300 Sobic004G066500--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic004G066500--Sobic003G098300 Sobic004G066500--Sobic002G266300 Sobic001G044300 Sobic001G044300 Sobic004G066500--Sobic001G044300 Sobic004G066500--Sobic001G508200 Sobic005G045700--Sobic002G127900 Sobic005G045700--Sobic007G053100 Sobic005G045700--Sobic002G266300 Sobic002G054400 Sobic002G054400 Sobic005G045700--Sobic002G054400 Sobic003G368901 Sobic003G368901 Sobic005G045700--Sobic003G368901 Sobic005G045700--Sobic001G125300 Sobic009G012600 Sobic009G012600 Sobic005G045700--Sobic009G012600 Sobic005G045700--Sobic008G191850 Sobic006G262501 Sobic006G262501 Sobic005G045700--Sobic006G262501 Sobic001G254600 Sobic001G254600 Sobic003G418200--Sobic001G254600 Sobic006G030100 Sobic006G030100 Sobic003G418200--Sobic006G030100 Sobic007G100500 Sobic007G100500 Sobic003G418200--Sobic007G100500 Sobic003G418200--Sobic003G404000 Sobic001G290600 Sobic001G290600 Sobic003G418200--Sobic001G290600 Sobic010G155600 Sobic010G155600 Sobic003G418200--Sobic010G155600 Sobic003G433300 Sobic003G433300 Sobic003G418200--Sobic003G433300 Sobic001G283300 Sobic001G283300 Sobic003G418200--Sobic001G283300 Sobic003G418200--Sobic002G366300 Sobic010G011900 Sobic010G011900 Sobic001G493500--Sobic010G011900 Sobic004G234300 Sobic004G234300 Sobic001G493500--Sobic004G234300 Sobic001G493500--Sobic010G077300 Sobic001G493500--Sobic010G170000 Sobic001G493500--Sobic003G224600 Sobic001G286000 Sobic001G286000 Sobic001G493500--Sobic001G286000 Sobic009G201500 Sobic009G201500 Sobic001G493500--Sobic009G201500 Sobic001G493500--Sobic004G066500 Sobic007G045900 Sobic007G045900 Sobic001G493500--Sobic007G045900
Octagon: transcription factors


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