Gene annotation
Transcriptome id Sobic.009G015400.2
Synonym CHX20, ATCHX20
Functional annotation ATCHX20, putative, expressed
UniProt A0A1B6P629
Pfam -
Panther DB PTHR32468 PTHR32468:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53720 : cation/H+ exchanger 20
RAP-DB (Rice) LOC_Os05g02240.1 : ATCHX20, putative, expressed
MaizeGDB (Corn) Zm00025a004711 , Zm00025a004710 , Zm00025a040913
Brachypodium KQK07657
Barley HORVU1Hr1G005800.10 , HORVU1Hr1G005800.8 , HORVU1Hr1G005800.9 , HORVU1Hr1G005800.4 , HORVU1Hr1G005800.5 , HORVU1Hr1G005800.6 , HORVU1Hr1G005800.7 , HORVU1Hr1G005800.1 , HORVU1Hr1G005800.3
Wheat TraesCS1D02G039000 , TraesCS1D02G039000 , TraesCS1B02G047900 , TraesCS1A02G037400 , TraesCS1A02G037400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G015300 ATCHX20, putative, expressed -
2 Sobic.004G190900 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.008G092532 - -
4 Sobic.003G155300 dihydrolipoyl dehydrogenase, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
5 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
6 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
7 Sobic.007G225000 copper-transporting ATPase PAA1, putative, expressed K01533: P-type Cu2+ transporter
8 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
9 Sobic.001G036050 - -
10 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
11 Sobic.010G277500 expressed protein -
12 Sobic.008G011200 STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.004G258700 PHD-finger family protein, expressed -
14 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
15 Sobic.004G027800 beta-amylase, putative, expressed -
16 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
17 Sobic.005G225800 white-brown complex homolog protein 11, putative, expressed -
18 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
19 Sobic.001G261573 - -
20 Sobic.006G058100 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC


Gene co-expression network
sample Sobic009G015400 Sobic009G015400 Sobic009G015300 Sobic009G015300 Sobic009G015400--Sobic009G015300 Sobic004G190900 Sobic004G190900 Sobic009G015400--Sobic004G190900 Sobic008G092532 Sobic008G092532 Sobic009G015400--Sobic008G092532 Sobic003G155300 Sobic003G155300 Sobic009G015400--Sobic003G155300 Sobic003G254000 Sobic003G254000 Sobic009G015400--Sobic003G254000 Sobic001G035900 Sobic001G035900 Sobic009G015400--Sobic001G035900 Sobic007G225000 Sobic007G225000 Sobic009G015400--Sobic007G225000 Sobic002G031400 Sobic002G031400 Sobic009G015400--Sobic002G031400 Sobic001G036050 Sobic001G036050 Sobic009G015400--Sobic001G036050 Sobic008G078900 Sobic008G078900 Sobic009G015300--Sobic008G078900 Sobic009G015300--Sobic009G015400 Sobic007G204900 Sobic007G204900 Sobic009G015300--Sobic007G204900 Sobic005G111500 Sobic005G111500 Sobic009G015300--Sobic005G111500 Sobic001G455500 Sobic001G455500 Sobic009G015300--Sobic001G455500 Sobic008G011200 Sobic008G011200 Sobic009G015300--Sobic008G011200 Sobic002G114700 Sobic002G114700 Sobic009G015300--Sobic002G114700 Sobic009G015300--Sobic004G190900 Sobic003G114100 Sobic003G114100 Sobic009G015300--Sobic003G114100 Sobic003G434700 Sobic003G434700 Sobic004G190900--Sobic003G434700 Sobic003G162800 Sobic003G162800 Sobic004G190900--Sobic003G162800 Sobic004G206200 Sobic004G206200 Sobic004G190900--Sobic004G206200 Sobic007G069400 Sobic007G069400 Sobic004G190900--Sobic007G069400 Sobic004G225600 Sobic004G225600 Sobic004G190900--Sobic004G225600 Sobic001G022500 Sobic001G022500 Sobic004G190900--Sobic001G022500 Sobic006G110200 Sobic006G110200 Sobic004G190900--Sobic006G110200 Sobic004G190900--Sobic003G254000 Sobic004G035000 Sobic004G035000 Sobic004G190900--Sobic004G035000 Sobic001G227200 Sobic001G227200 Sobic008G092532--Sobic001G227200 Sobic004G258700 Sobic004G258700 Sobic008G092532--Sobic004G258700 Sobic007G054400 Sobic007G054400 Sobic008G092532--Sobic007G054400 Sobic010G277500 Sobic010G277500 Sobic008G092532--Sobic010G277500 Sobic003G101500 Sobic003G101500 Sobic008G092532--Sobic003G101500 Sobic010G172000 Sobic010G172000 Sobic008G092532--Sobic010G172000 Sobic007G225800 Sobic007G225800 Sobic008G092532--Sobic007G225800 Sobic007G210000 Sobic007G210000 Sobic008G092532--Sobic007G210000 Sobic004G107200 Sobic004G107200 Sobic008G092532--Sobic004G107200 Sobic009G129100 Sobic009G129100 Sobic003G155300--Sobic009G129100 Sobic002G148750 Sobic002G148750 Sobic003G155300--Sobic002G148750 Sobic002G293600 Sobic002G293600 Sobic003G155300--Sobic002G293600 Sobic003G155300--Sobic001G227200 Sobic003G149300 Sobic003G149300 Sobic003G155300--Sobic003G149300 Sobic004G185800 Sobic004G185800 Sobic003G155300--Sobic004G185800 Sobic002G425500 Sobic002G425500 Sobic003G155300--Sobic002G425500 Sobic006G194400 Sobic006G194400 Sobic003G155300--Sobic006G194400 Sobic003G155300--Sobic008G092532 Sobic003G254000--Sobic001G035900 Sobic001G261573 Sobic001G261573 Sobic003G254000--Sobic001G261573 Sobic003G254000--Sobic004G035000 Sobic003G254000--Sobic002G031400 Sobic005G039500 Sobic005G039500 Sobic003G254000--Sobic005G039500 Sobic002G064750 Sobic002G064750 Sobic003G254000--Sobic002G064750 Sobic001G274200 Sobic001G274200 Sobic003G254000--Sobic001G274200 Sobic007G099100 Sobic007G099100 Sobic003G254000--Sobic007G099100 Sobic003G429650 Sobic003G429650 Sobic003G254000--Sobic003G429650 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic001G035900--Sobic002G064750 Sobic001G035900--Sobic007G099100 Sobic001G035900--Sobic001G274200 Sobic001G035900--Sobic003G429650 Sobic010G176550 Sobic010G176550 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic004G236400 Sobic004G236400 Sobic007G225000--Sobic004G236400 Sobic003G067100 Sobic003G067100 Sobic007G225000--Sobic003G067100 Sobic005G128400 Sobic005G128400 Sobic007G225000--Sobic005G128400 Sobic006G058100 Sobic006G058100 Sobic007G225000--Sobic006G058100 Sobic010G094700 Sobic010G094700 Sobic007G225000--Sobic010G094700 Sobic007G212300 Sobic007G212300 Sobic007G225000--Sobic007G212300 Sobic006G049900 Sobic006G049900 Sobic007G225000--Sobic006G049900 Sobic001G352900 Sobic001G352900 Sobic007G225000--Sobic001G352900 Sobic001G016600 Sobic001G016600 Sobic007G225000--Sobic001G016600 Sobic002G031400--Sobic010G277500 Sobic002G031400--Sobic007G161000 Sobic002G031400--Sobic001G035900 Sobic002G031400--Sobic003G254000 Sobic008G011100 Sobic008G011100 Sobic002G031400--Sobic008G011100 Sobic002G031400--Sobic010G176550 Sobic003G280800 Sobic003G280800 Sobic002G031400--Sobic003G280800 Sobic009G260500 Sobic009G260500 Sobic002G031400--Sobic009G260500 Sobic002G031400--Sobic004G258700 Sobic010G139000 Sobic010G139000 Sobic001G036050--Sobic010G139000 Sobic001G456900 Sobic001G456900 Sobic001G036050--Sobic001G456900 Sobic004G096600 Sobic004G096600 Sobic001G036050--Sobic004G096600 Sobic002G133400 Sobic002G133400 Sobic001G036050--Sobic002G133400 Sobic006G216800 Sobic006G216800 Sobic001G036050--Sobic006G216800 Sobic004G314000 Sobic004G314000 Sobic001G036050--Sobic004G314000 Sobic001G036050--Sobic004G258700 Sobic010G123600 Sobic010G123600 Sobic001G036050--Sobic010G123600 Sobic003G170900 Sobic003G170900 Sobic001G036050--Sobic003G170900
Octagon: transcription factors


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