Gene annotation
Transcriptome id Sobic.004G190900.1
Synonym EMB93, SOLDAT10, Sb04g023910
Functional annotation mTERF domain containing protein, expressed
UniProt A0A1Z5RNC4
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF36
NCBI CDD -
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT2G03050 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os02g36780.1 : mTERF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031735
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G434700 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed K03495: gidA, mnmG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme
2 Sobic.003G162800 expressed protein -
3 Sobic.004G206200 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
4 Sobic.007G069400 pentatricopeptide, putative, expressed -
5 Sobic.004G225600 - -
6 Sobic.001G022500 tRNA synthetases class II domain containing protein, expressed K04567: KARS, lysyl-tRNA synthetase, class II
7 Sobic.006G110200 CRS1/YhbY domain containing protein, expressed -
8 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
10 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
11 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -
12 Sobic.003G045300 cobalt ion transporter, putative, expressed -
13 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G019500 pentatricopeptide, putative, expressed -
15 Sobic.007G137800 pentatricopeptide, putative, expressed -
16 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
18 Sobic.003G039300 expressed protein -
19 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
20 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic004G190900 Sobic004G190900 Sobic003G434700 Sobic003G434700 Sobic004G190900--Sobic003G434700 Sobic003G162800 Sobic003G162800 Sobic004G190900--Sobic003G162800 Sobic004G206200 Sobic004G206200 Sobic004G190900--Sobic004G206200 Sobic007G069400 Sobic007G069400 Sobic004G190900--Sobic007G069400 Sobic004G225600 Sobic004G225600 Sobic004G190900--Sobic004G225600 Sobic001G022500 Sobic001G022500 Sobic004G190900--Sobic001G022500 Sobic006G110200 Sobic006G110200 Sobic004G190900--Sobic006G110200 Sobic003G254000 Sobic003G254000 Sobic004G190900--Sobic003G254000 Sobic004G035000 Sobic004G035000 Sobic004G190900--Sobic004G035000 Sobic003G434700--Sobic001G022500 Sobic003G067100 Sobic003G067100 Sobic003G434700--Sobic003G067100 Sobic005G072100 Sobic005G072100 Sobic003G434700--Sobic005G072100 Sobic002G042500 Sobic002G042500 Sobic003G434700--Sobic002G042500 Sobic003G434700--Sobic003G162800 Sobic001G102500 Sobic001G102500 Sobic003G434700--Sobic001G102500 Sobic003G434700--Sobic004G225600 Sobic001G375000 Sobic001G375000 Sobic003G434700--Sobic001G375000 Sobic003G234900 Sobic003G234900 Sobic003G434700--Sobic003G234900 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic002G156100 Sobic002G156100 Sobic003G162800--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic003G162800--Sobic003G345900 Sobic002G181132 Sobic002G181132 Sobic003G162800--Sobic002G181132 Sobic004G003900 Sobic004G003900 Sobic003G162800--Sobic004G003900 Sobic003G045300 Sobic003G045300 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic010G027200 Sobic010G027200 Sobic003G162800--Sobic010G027200 Sobic004G206200--Sobic002G042500 Sobic001G037500 Sobic001G037500 Sobic004G206200--Sobic001G037500 Sobic001G054100 Sobic001G054100 Sobic004G206200--Sobic001G054100 Sobic006G273400 Sobic006G273400 Sobic004G206200--Sobic006G273400 Sobic003G141100 Sobic003G141100 Sobic004G206200--Sobic003G141100 Sobic007G185700 Sobic007G185700 Sobic004G206200--Sobic007G185700 Sobic009G223200 Sobic009G223200 Sobic004G206200--Sobic009G223200 Sobic005G111550 Sobic005G111550 Sobic004G206200--Sobic005G111550 Sobic006G210400 Sobic006G210400 Sobic004G206200--Sobic006G210400 Sobic003G039300 Sobic003G039300 Sobic007G069400--Sobic003G039300 Sobic007G069400--Sobic001G037500 Sobic007G069400--Sobic006G110200 Sobic007G069400--Sobic006G273400 Sobic009G127400 Sobic009G127400 Sobic007G069400--Sobic009G127400 Sobic002G114700 Sobic002G114700 Sobic007G069400--Sobic002G114700 Sobic007G069400--Sobic003G162800 Sobic007G069400--Sobic001G054100 Sobic001G537700 Sobic001G537700 Sobic007G069400--Sobic001G537700 Sobic004G225600--Sobic001G022500 Sobic004G208600 Sobic004G208600 Sobic004G225600--Sobic004G208600 Sobic004G225600--Sobic003G162800 Sobic001G099000 Sobic001G099000 Sobic004G225600--Sobic001G099000 Sobic007G095500 Sobic007G095500 Sobic004G225600--Sobic007G095500 Sobic006G058100 Sobic006G058100 Sobic004G225600--Sobic006G058100 Sobic004G225600--Sobic001G375000 Sobic004G225600--Sobic003G434700 Sobic005G184300 Sobic005G184300 Sobic004G225600--Sobic005G184300 Sobic001G022500--Sobic003G434700 Sobic001G022500--Sobic004G225600 Sobic001G022500--Sobic004G003900 Sobic001G022500--Sobic003G162800 Sobic001G003900 Sobic001G003900 Sobic001G022500--Sobic001G003900 Sobic001G022500--Sobic003G067100 Sobic001G022500--Sobic001G375000 Sobic001G022500--Sobic001G099000 Sobic001G022500--Sobic003G327200 Sobic006G110200--Sobic003G039300 Sobic006G110200--Sobic007G069400 Sobic002G140000 Sobic002G140000 Sobic006G110200--Sobic002G140000 Sobic006G110200--Sobic001G537700 Sobic009G137000 Sobic009G137000 Sobic006G110200--Sobic009G137000 Sobic007G015300 Sobic007G015300 Sobic006G110200--Sobic007G015300 Sobic002G045700 Sobic002G045700 Sobic006G110200--Sobic002G045700 Sobic006G110200--Sobic010G027200 Sobic001G228300 Sobic001G228300 Sobic006G110200--Sobic001G228300 Sobic001G035900 Sobic001G035900 Sobic003G254000--Sobic001G035900 Sobic001G261573 Sobic001G261573 Sobic003G254000--Sobic001G261573 Sobic003G254000--Sobic004G035000 Sobic002G031400 Sobic002G031400 Sobic003G254000--Sobic002G031400 Sobic005G039500 Sobic005G039500 Sobic003G254000--Sobic005G039500 Sobic002G064750 Sobic002G064750 Sobic003G254000--Sobic002G064750 Sobic001G274200 Sobic001G274200 Sobic003G254000--Sobic001G274200 Sobic007G099100 Sobic007G099100 Sobic003G254000--Sobic007G099100 Sobic003G429650 Sobic003G429650 Sobic003G254000--Sobic003G429650 Sobic004G035000--Sobic003G254000 Sobic007G076700 Sobic007G076700 Sobic004G035000--Sobic007G076700 Sobic004G142700 Sobic004G142700 Sobic004G035000--Sobic004G142700 Sobic009G212700 Sobic009G212700 Sobic004G035000--Sobic009G212700 Sobic004G035000--Sobic005G039500 Sobic004G035000--Sobic001G035900 Sobic004G035000--Sobic002G114700 Sobic004G035000--Sobic002G031400 Sobic005G225800 Sobic005G225800 Sobic004G035000--Sobic005G225800
Octagon: transcription factors


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