Gene annotation
Transcriptome id Sobic.009G015300.1
Synonym CHX20, ATCHX20
Functional annotation ATCHX20, putative, expressed
UniProt A0A1B6P646
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G53720 : cation/H+ exchanger 20
RAP-DB (Rice) LOC_Os05g02240.1 : ATCHX20, putative, expressed
MaizeGDB (Corn) Zm00025a004710 , Zm00025a040913
Brachypodium KQJ85768 , KQJ85769 , KQK12360 , KQK07657
Barley HORVU1Hr1G005800.10 , HORVU1Hr1G005800.11 , HORVU5Hr1G008270.1 , HORVU5Hr1G008270.2 , HORVU5Hr1G008270.3 , HORVU5Hr1G008270.5 , HORVU5Hr1G008270.6 , HORVU5Hr1G008270.7 , HORVU5Hr1G115390.2 , HORVU5Hr1G115390.3 , HORVU5Hr1G115390.1 , HORVU6Hr1G076720.4 , HORVU6Hr1G076720.1 , HORVU6Hr1G076720.2 , HORVU6Hr1G076720.3 , HORVU1Hr1G005800.4 , HORVU1Hr1G005800.5 , HORVU1Hr1G005800.6 , HORVU1Hr1G005800.3
Wheat TraesCS5D02G039800 , TraesCS1D02G039000 , TraesCS1D02G039000 , TraesCS5D02G039900 , TraesCS1B02G047900 , TraesCS5B02G031800 , TraesCS5A02G031600 , TraesCS4A02G368300 , TraesCS1A02G037400 , TraesCS5D02G505000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
2 Sobic.009G015400 ATCHX20, putative, expressed -
3 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
4 Sobic.005G111500 FHA domain containing protein, putative, expressed -
5 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.008G011200 STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G190900 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
9 Sobic.003G114100 expressed protein -
10 Sobic.008G063200 expressed protein -
11 Sobic.003G310800 expressed protein -
12 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
13 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.004G206200 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.005G155900 weakly similar to Myb factor(PubMedID : 29862293)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.010G009466 - -
17 Sobic.009G068300 chloroplast lumen common family protein, putative, expressed -
18 Sobic.003G161100 powdery mildew resistance protein PM3A, putative, expressed -
19 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
20 Sobic.008G183200 LOL3, putative, expressed -


Gene co-expression network
sample Sobic009G015300 Sobic009G015300 Sobic008G078900 Sobic008G078900 Sobic009G015300--Sobic008G078900 Sobic009G015400 Sobic009G015400 Sobic009G015300--Sobic009G015400 Sobic007G204900 Sobic007G204900 Sobic009G015300--Sobic007G204900 Sobic005G111500 Sobic005G111500 Sobic009G015300--Sobic005G111500 Sobic001G455500 Sobic001G455500 Sobic009G015300--Sobic001G455500 Sobic008G011200 Sobic008G011200 Sobic009G015300--Sobic008G011200 Sobic002G114700 Sobic002G114700 Sobic009G015300--Sobic002G114700 Sobic004G190900 Sobic004G190900 Sobic009G015300--Sobic004G190900 Sobic003G114100 Sobic003G114100 Sobic009G015300--Sobic003G114100 Sobic006G273400 Sobic006G273400 Sobic008G078900--Sobic006G273400 Sobic008G078900--Sobic002G114700 Sobic008G078900--Sobic003G114100 Sobic003G170200 Sobic003G170200 Sobic008G078900--Sobic003G170200 Sobic008G078900--Sobic005G111500 Sobic001G037500 Sobic001G037500 Sobic008G078900--Sobic001G037500 Sobic003G084500 Sobic003G084500 Sobic008G078900--Sobic003G084500 Sobic007G205600 Sobic007G205600 Sobic008G078900--Sobic007G205600 Sobic008G063200 Sobic008G063200 Sobic008G078900--Sobic008G063200 Sobic009G015400--Sobic009G015300 Sobic009G015400--Sobic004G190900 Sobic008G092532 Sobic008G092532 Sobic009G015400--Sobic008G092532 Sobic003G155300 Sobic003G155300 Sobic009G015400--Sobic003G155300 Sobic003G254000 Sobic003G254000 Sobic009G015400--Sobic003G254000 Sobic001G035900 Sobic001G035900 Sobic009G015400--Sobic001G035900 Sobic007G225000 Sobic007G225000 Sobic009G015400--Sobic007G225000 Sobic002G031400 Sobic002G031400 Sobic009G015400--Sobic002G031400 Sobic001G036050 Sobic001G036050 Sobic009G015400--Sobic001G036050 Sobic004G001300 Sobic004G001300 Sobic007G204900--Sobic004G001300 Sobic007G213700 Sobic007G213700 Sobic007G204900--Sobic007G213700 Sobic007G204900--Sobic008G011200 Sobic003G305000 Sobic003G305000 Sobic007G204900--Sobic003G305000 Sobic010G096300 Sobic010G096300 Sobic007G204900--Sobic010G096300 Sobic003G068800 Sobic003G068800 Sobic007G204900--Sobic003G068800 Sobic006G249050 Sobic006G249050 Sobic007G204900--Sobic006G249050 Sobic001G065600 Sobic001G065600 Sobic007G204900--Sobic001G065600 Sobic001G098301 Sobic001G098301 Sobic007G204900--Sobic001G098301 Sobic010G076800 Sobic010G076800 Sobic005G111500--Sobic010G076800 Sobic008G183200 Sobic008G183200 Sobic005G111500--Sobic008G183200 Sobic009G062500 Sobic009G062500 Sobic005G111500--Sobic009G062500 Sobic005G111500--Sobic008G063200 Sobic002G102200 Sobic002G102200 Sobic005G111500--Sobic002G102200 Sobic007G076900 Sobic007G076900 Sobic005G111500--Sobic007G076900 Sobic001G186200 Sobic001G186200 Sobic005G111500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic005G111500--Sobic001G006000 Sobic003G037300 Sobic003G037300 Sobic005G111500--Sobic003G037300 Sobic003G439000 Sobic003G439000 Sobic001G455500--Sobic003G439000 Sobic004G179200 Sobic004G179200 Sobic001G455500--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic001G455500--Sobic002G297400 Sobic001G455500--Sobic001G186200 Sobic001G455500--Sobic001G006000 Sobic004G357300 Sobic004G357300 Sobic001G455500--Sobic004G357300 Sobic001G469900 Sobic001G469900 Sobic001G455500--Sobic001G469900 Sobic006G210400 Sobic006G210400 Sobic001G455500--Sobic006G210400 Sobic001G001300 Sobic001G001300 Sobic001G455500--Sobic001G001300 Sobic008G011200--Sobic007G204900 Sobic005G155900 Sobic005G155900 Sobic008G011200--Sobic005G155900 Sobic004G354200 Sobic004G354200 Sobic008G011200--Sobic004G354200 Sobic008G011200--Sobic002G114700 Sobic008G011200--Sobic003G254000 Sobic004G035000 Sobic004G035000 Sobic008G011200--Sobic004G035000 Sobic008G011200--Sobic004G001300 Sobic001G261573 Sobic001G261573 Sobic008G011200--Sobic001G261573 Sobic006G186500 Sobic006G186500 Sobic008G011200--Sobic006G186500 Sobic002G114700--Sobic008G078900 Sobic002G114700--Sobic003G114100 Sobic002G114700--Sobic006G273400 Sobic001G076200 Sobic001G076200 Sobic002G114700--Sobic001G076200 Sobic003G110700 Sobic003G110700 Sobic002G114700--Sobic003G110700 Sobic007G069400 Sobic007G069400 Sobic002G114700--Sobic007G069400 Sobic006G214400 Sobic006G214400 Sobic002G114700--Sobic006G214400 Sobic002G114700--Sobic004G035000 Sobic002G114700--Sobic007G205600 Sobic003G434700 Sobic003G434700 Sobic004G190900--Sobic003G434700 Sobic003G162800 Sobic003G162800 Sobic004G190900--Sobic003G162800 Sobic004G206200 Sobic004G206200 Sobic004G190900--Sobic004G206200 Sobic004G190900--Sobic007G069400 Sobic004G225600 Sobic004G225600 Sobic004G190900--Sobic004G225600 Sobic001G022500 Sobic001G022500 Sobic004G190900--Sobic001G022500 Sobic006G110200 Sobic006G110200 Sobic004G190900--Sobic006G110200 Sobic004G190900--Sobic003G254000 Sobic004G190900--Sobic004G035000 Sobic003G114100--Sobic002G114700 Sobic003G114100--Sobic001G076200 Sobic003G114100--Sobic008G078900 Sobic010G052500 Sobic010G052500 Sobic003G114100--Sobic010G052500 Sobic003G014000 Sobic003G014000 Sobic003G114100--Sobic003G014000 Sobic007G201400 Sobic007G201400 Sobic003G114100--Sobic007G201400 Sobic008G131700 Sobic008G131700 Sobic003G114100--Sobic008G131700 Sobic003G114100--Sobic006G273400 Sobic001G514100 Sobic001G514100 Sobic003G114100--Sobic001G514100
Octagon: transcription factors


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