Gene annotation
Transcriptome id Sobic.005G155900.1
Synonym Sb05g021820, MYB60, AtMYB60
Functional annotation weakly similar to Myb factor (PubMedID : 29862293)
MYB family transcription factor, putative, expressed
UniProt C5Y4R2
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF614
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08810 : myb domain protein 60
RAP-DB (Rice) LOC_Os11g35390.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053742 , Zm00025a005909 , Zm00025a053739 , Zm00025a032982 , Zm00025a005940 , Zm00025a048846 , Zm00025a034111 , Zm00025a033367 , Zm00025a013472
Brachypodium KQK21499 , KQK02077 , KQJ89518 , KQJ92481 , KQJ98451 , KQJ88197 , KQJ91657 , KQK15086 , PNT77324 , KQJ90229
Barley HORVU6Hr1G083250.1 , HORVU6Hr1G083250.2 , HORVU6Hr1G083250.3 , HORVU4Hr1G023510.2 , HORVU4Hr1G023510.7 , HORVU4Hr1G023510.6 , HORVU4Hr1G023510.5 , HORVU4Hr1G023510.4 , HORVU5Hr1G045550.8 , HORVU5Hr1G045550.9 , HORVU5Hr1G045550.2 , HORVU5Hr1G045550.3 , HORVU5Hr1G045550.1 , HORVU5Hr1G045550.6 , HORVU5Hr1G045550.4 , HORVU5Hr1G045550.5 , HORVU5Hr1G045540.1 , HORVU5Hr1G045540.3 , HORVU5Hr1G045540.2 , HORVU5Hr1G045540.4 , HORVU5Hr1G045540.6
Wheat TraesCS6A02G344700 , TraesCS5B02G141200 , TraesCS4D02G123300 , TraesCS5B02G556300 , TraesCS4B02G129100 , TraesCS5D02G149600 , TraesCS2D02G163700 , TraesCS5D02G234800 , TraesCS6B02G377400 , TraesCS5D02G552200 , TraesCS2A02G069300 , TraesCS2A02G157600 , TraesCS6D02G327300 , TraesCS5B02G226100 , TraesCS5A02G142500 , TraesCS4A02G189700 , TraesCS2B02G183100 , TraesCS4A02G322200 , TraesCS2D02G068000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G011200 STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.001G028100 - -
3 Sobic.004G248400 APO, putative, expressed -
4 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
5 Sobic.009G212700 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
6 Sobic.001G054100 spo0B-associated GTP-binding protein, putative, expressed -
7 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
9 Sobic.001G016100 pentatricopeptide, putative, expressed -
10 Sobic.004G183300 expressed protein -
11 Sobic.004G142700 PPR repeat domain containing protein, putative, expressed -
12 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
13 Sobic.004G190900 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
15 Sobic.005G225800 white-brown complex homolog protein 11, putative, expressed -
16 Sobic.003G310800 expressed protein -
17 Sobic.001G537700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
18 Sobic.006G270200 smr domain containing protein, expressed K07456: DNA mismatch repair protein MutS2
19 Sobic.004G354200 expressed protein -
20 Sobic.002G168300 RGH2B, putative, expressed -


Gene co-expression network
sample Sobic005G155900 Sobic005G155900 Sobic008G011200 Sobic008G011200 Sobic005G155900--Sobic008G011200 Sobic001G028100 Sobic001G028100 Sobic005G155900--Sobic001G028100 Sobic004G248400 Sobic004G248400 Sobic005G155900--Sobic004G248400 Sobic004G035000 Sobic004G035000 Sobic005G155900--Sobic004G035000 Sobic009G212700 Sobic009G212700 Sobic005G155900--Sobic009G212700 Sobic001G054100 Sobic001G054100 Sobic005G155900--Sobic001G054100 Sobic002G114700 Sobic002G114700 Sobic005G155900--Sobic002G114700 Sobic001G035900 Sobic001G035900 Sobic005G155900--Sobic001G035900 Sobic001G016100 Sobic001G016100 Sobic005G155900--Sobic001G016100 Sobic007G204900 Sobic007G204900 Sobic008G011200--Sobic007G204900 Sobic008G011200--Sobic005G155900 Sobic004G354200 Sobic004G354200 Sobic008G011200--Sobic004G354200 Sobic008G011200--Sobic002G114700 Sobic003G254000 Sobic003G254000 Sobic008G011200--Sobic003G254000 Sobic008G011200--Sobic004G035000 Sobic004G001300 Sobic004G001300 Sobic008G011200--Sobic004G001300 Sobic001G261573 Sobic001G261573 Sobic008G011200--Sobic001G261573 Sobic006G186500 Sobic006G186500 Sobic008G011200--Sobic006G186500 Sobic001G028100--Sobic001G054100 Sobic006G270200 Sobic006G270200 Sobic001G028100--Sobic006G270200 Sobic003G352500 Sobic003G352500 Sobic001G028100--Sobic003G352500 Sobic002G181000 Sobic002G181000 Sobic001G028100--Sobic002G181000 Sobic007G185700 Sobic007G185700 Sobic001G028100--Sobic007G185700 Sobic010G002000 Sobic010G002000 Sobic001G028100--Sobic010G002000 Sobic008G039600 Sobic008G039600 Sobic001G028100--Sobic008G039600 Sobic003G232700 Sobic003G232700 Sobic001G028100--Sobic003G232700 Sobic002G043600 Sobic002G043600 Sobic001G028100--Sobic002G043600 Sobic006G214700 Sobic006G214700 Sobic004G248400--Sobic006G214700 Sobic004G333400 Sobic004G333400 Sobic004G248400--Sobic004G333400 Sobic009G052700 Sobic009G052700 Sobic004G248400--Sobic009G052700 Sobic002G168300 Sobic002G168300 Sobic004G248400--Sobic002G168300 Sobic001G450600 Sobic001G450600 Sobic004G248400--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic004G248400--Sobic003G334100 Sobic003G179400 Sobic003G179400 Sobic004G248400--Sobic003G179400 Sobic008G063200 Sobic008G063200 Sobic004G248400--Sobic008G063200 Sobic010G110332 Sobic010G110332 Sobic004G248400--Sobic010G110332 Sobic004G035000--Sobic003G254000 Sobic007G076700 Sobic007G076700 Sobic004G035000--Sobic007G076700 Sobic004G142700 Sobic004G142700 Sobic004G035000--Sobic004G142700 Sobic004G035000--Sobic009G212700 Sobic005G039500 Sobic005G039500 Sobic004G035000--Sobic005G039500 Sobic004G035000--Sobic001G035900 Sobic004G035000--Sobic002G114700 Sobic002G031400 Sobic002G031400 Sobic004G035000--Sobic002G031400 Sobic005G225800 Sobic005G225800 Sobic004G035000--Sobic005G225800 Sobic009G212700--Sobic005G039500 Sobic009G212700--Sobic004G035000 Sobic005G187200 Sobic005G187200 Sobic009G212700--Sobic005G187200 Sobic007G052900 Sobic007G052900 Sobic009G212700--Sobic007G052900 Sobic009G212700--Sobic004G142700 Sobic007G037900 Sobic007G037900 Sobic009G212700--Sobic007G037900 Sobic007G054000 Sobic007G054000 Sobic009G212700--Sobic007G054000 Sobic001G479500 Sobic001G479500 Sobic009G212700--Sobic001G479500 Sobic009G134500 Sobic009G134500 Sobic009G212700--Sobic009G134500 Sobic001G054100--Sobic001G028100 Sobic003G372900 Sobic003G372900 Sobic001G054100--Sobic003G372900 Sobic001G083100 Sobic001G083100 Sobic001G054100--Sobic001G083100 Sobic001G054100--Sobic002G181000 Sobic003G141100 Sobic003G141100 Sobic001G054100--Sobic003G141100 Sobic001G054100--Sobic010G002000 Sobic001G054100--Sobic007G185700 Sobic001G037500 Sobic001G037500 Sobic001G054100--Sobic001G037500 Sobic004G328400 Sobic004G328400 Sobic001G054100--Sobic004G328400 Sobic008G078900 Sobic008G078900 Sobic002G114700--Sobic008G078900 Sobic003G114100 Sobic003G114100 Sobic002G114700--Sobic003G114100 Sobic006G273400 Sobic006G273400 Sobic002G114700--Sobic006G273400 Sobic001G076200 Sobic001G076200 Sobic002G114700--Sobic001G076200 Sobic003G110700 Sobic003G110700 Sobic002G114700--Sobic003G110700 Sobic007G069400 Sobic007G069400 Sobic002G114700--Sobic007G069400 Sobic006G214400 Sobic006G214400 Sobic002G114700--Sobic006G214400 Sobic002G114700--Sobic004G035000 Sobic007G205600 Sobic007G205600 Sobic002G114700--Sobic007G205600 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic002G064750 Sobic002G064750 Sobic001G035900--Sobic002G064750 Sobic007G099100 Sobic007G099100 Sobic001G035900--Sobic007G099100 Sobic001G274200 Sobic001G274200 Sobic001G035900--Sobic001G274200 Sobic003G429650 Sobic003G429650 Sobic001G035900--Sobic003G429650 Sobic010G176550 Sobic010G176550 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic009G024000 Sobic009G024000 Sobic001G035900--Sobic009G024000 Sobic009G121000 Sobic009G121000 Sobic001G016100--Sobic009G121000 Sobic002G028400 Sobic002G028400 Sobic001G016100--Sobic002G028400 Sobic001G016100--Sobic001G054100 Sobic003G094350 Sobic003G094350 Sobic001G016100--Sobic003G094350 Sobic001G016100--Sobic010G002000 Sobic002G133900 Sobic002G133900 Sobic001G016100--Sobic002G133900 Sobic010G043800 Sobic010G043800 Sobic001G016100--Sobic010G043800 Sobic001G016100--Sobic003G372900 Sobic001G016100--Sobic001G028100
Octagon: transcription factors


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