Gene annotation
Transcriptome id Sobic.003G310800.3
Synonym Sb03g035890
Functional annotation expressed protein
UniProt A0A1W0VZS5
Pfam -
Panther DB PTHR15852 PTHR15852:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44020 : thylakoid lumenal P17.1 protein
RAP-DB (Rice) LOC_Os01g70460.2 : expressed protein
MaizeGDB (Corn) Zm00025a039913
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G279100 expressed protein -
2 Sobic.003G214800 pentatricopeptide, putative, expressed -
3 Sobic.001G186200 pentatricopeptide, putative, expressed -
4 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
5 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
7 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
8 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
9 Sobic.001G388400 expressed protein -
10 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G163700 expressed protein -
13 Sobic.001G513000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
15 Sobic.001G058600 BT1 family protein, putative, expressed -
16 Sobic.008G063200 expressed protein -
17 Sobic.002G250100 dehydrogenase, putative, expressed -
18 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
19 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
20 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin


Gene co-expression network
sample Sobic003G310800 Sobic003G310800 Sobic010G279100 Sobic010G279100 Sobic003G310800--Sobic010G279100 Sobic003G214800 Sobic003G214800 Sobic003G310800--Sobic003G214800 Sobic001G186200 Sobic001G186200 Sobic003G310800--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic003G310800--Sobic001G006000 Sobic001G455500 Sobic001G455500 Sobic003G310800--Sobic001G455500 Sobic002G038300 Sobic002G038300 Sobic003G310800--Sobic002G038300 Sobic010G028000 Sobic010G028000 Sobic003G310800--Sobic010G028000 Sobic003G245800 Sobic003G245800 Sobic003G310800--Sobic003G245800 Sobic001G388400 Sobic001G388400 Sobic003G310800--Sobic001G388400 Sobic010G279100--Sobic003G214800 Sobic002G199000 Sobic002G199000 Sobic010G279100--Sobic002G199000 Sobic010G279100--Sobic001G455500 Sobic006G204600 Sobic006G204600 Sobic010G279100--Sobic006G204600 Sobic001G058600 Sobic001G058600 Sobic010G279100--Sobic001G058600 Sobic010G279100--Sobic003G310800 Sobic003G439000 Sobic003G439000 Sobic010G279100--Sobic003G439000 Sobic004G342500 Sobic004G342500 Sobic010G279100--Sobic004G342500 Sobic004G357300 Sobic004G357300 Sobic010G279100--Sobic004G357300 Sobic003G214800--Sobic010G279100 Sobic001G372600 Sobic001G372600 Sobic003G214800--Sobic001G372600 Sobic003G214800--Sobic003G310800 Sobic003G345300 Sobic003G345300 Sobic003G214800--Sobic003G345300 Sobic004G289300 Sobic004G289300 Sobic003G214800--Sobic004G289300 Sobic001G484300 Sobic001G484300 Sobic003G214800--Sobic001G484300 Sobic002G341500 Sobic002G341500 Sobic003G214800--Sobic002G341500 Sobic001G284200 Sobic001G284200 Sobic003G214800--Sobic001G284200 Sobic003G214800--Sobic004G342500 Sobic007G085800 Sobic007G085800 Sobic001G186200--Sobic007G085800 Sobic001G186200--Sobic003G439000 Sobic001G186200--Sobic001G455500 Sobic006G210400 Sobic006G210400 Sobic001G186200--Sobic006G210400 Sobic003G342200 Sobic003G342200 Sobic001G186200--Sobic003G342200 Sobic008G063200 Sobic008G063200 Sobic001G186200--Sobic008G063200 Sobic005G111500 Sobic005G111500 Sobic001G186200--Sobic005G111500 Sobic001G168800 Sobic001G168800 Sobic001G186200--Sobic001G168800 Sobic001G450600 Sobic001G450600 Sobic001G186200--Sobic001G450600 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic009G028400 Sobic009G028400 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic004G179200 Sobic004G179200 Sobic001G006000--Sobic004G179200 Sobic001G339100 Sobic001G339100 Sobic001G006000--Sobic001G339100 Sobic003G253300 Sobic003G253300 Sobic001G006000--Sobic003G253300 Sobic001G006000--Sobic003G245800 Sobic001G455500--Sobic003G439000 Sobic001G455500--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic001G455500--Sobic002G297400 Sobic001G455500--Sobic001G186200 Sobic001G455500--Sobic001G006000 Sobic001G455500--Sobic004G357300 Sobic001G469900 Sobic001G469900 Sobic001G455500--Sobic001G469900 Sobic001G455500--Sobic006G210400 Sobic001G001300 Sobic001G001300 Sobic001G455500--Sobic001G001300 Sobic002G386400 Sobic002G386400 Sobic002G038300--Sobic002G386400 Sobic001G161300 Sobic001G161300 Sobic002G038300--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G038300--Sobic002G163700 Sobic002G038300--Sobic001G388400 Sobic009G234200 Sobic009G234200 Sobic002G038300--Sobic009G234200 Sobic009G138900 Sobic009G138900 Sobic002G038300--Sobic009G138900 Sobic003G208300 Sobic003G208300 Sobic002G038300--Sobic003G208300 Sobic002G038300--Sobic001G450600 Sobic002G038300--Sobic010G028000 Sobic010G028000--Sobic001G388400 Sobic010G028000--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic010G028000--Sobic006G204100 Sobic010G074200 Sobic010G074200 Sobic010G028000--Sobic010G074200 Sobic009G036300 Sobic009G036300 Sobic010G028000--Sobic009G036300 Sobic007G227600 Sobic007G227600 Sobic010G028000--Sobic007G227600 Sobic003G330100 Sobic003G330100 Sobic010G028000--Sobic003G330100 Sobic010G028000--Sobic003G245800 Sobic010G183400 Sobic010G183400 Sobic010G028000--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic003G245800--Sobic006G197700 Sobic002G345200 Sobic002G345200 Sobic003G245800--Sobic002G345200 Sobic004G250200 Sobic004G250200 Sobic003G245800--Sobic004G250200 Sobic003G245800--Sobic010G183400 Sobic003G439600 Sobic003G439600 Sobic003G245800--Sobic003G439600 Sobic002G250100 Sobic002G250100 Sobic003G245800--Sobic002G250100 Sobic003G221700 Sobic003G221700 Sobic003G245800--Sobic003G221700 Sobic003G245800--Sobic009G234200 Sobic003G245800--Sobic003G330100 Sobic001G388400--Sobic009G234200 Sobic001G388400--Sobic010G028000 Sobic001G388400--Sobic009G036300 Sobic001G388400--Sobic010G074200 Sobic001G388400--Sobic007G227600 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic009G233800 Sobic009G233800 Sobic001G388400--Sobic009G233800 Sobic001G388400--Sobic002G250100
Octagon: transcription factors


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