Gene annotation
Transcriptome id Sobic.010G279100.1
Synonym Sb10g031250
Functional annotation expressed protein
UniProt C5Z2N3
Pfam -
Panther DB PTHR36888 PTHR36888:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g51500.1 : expressed protein
MaizeGDB (Corn) Zm00025a018597
Brachypodium -
Barley HORVU7Hr1G119610.1 , HORVU7Hr1G119610.3
Wheat TraesCS7A02G564300 , TraesCS7D02G546600 , TraesCSU02G183800 , TraesCSU02G183800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214800 pentatricopeptide, putative, expressed -
2 Sobic.002G199000 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed K00592: [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase
3 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
4 Sobic.006G204600 pentatricopeptide, putative, expressed -
5 Sobic.001G058600 BT1 family protein, putative, expressed -
6 Sobic.003G310800 expressed protein -
7 Sobic.003G439000 rubredoxin family protein, putative, expressed -
8 Sobic.004G342500 uncharacterized protein yqjG, putative, expressed K07393: ECM4, glutathionyl-hydroquinone reductase
9 Sobic.004G357300 uncharacterized ACR, COG1399 family protein, expressed -
10 Sobic.002G341500 rotamase(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed -
11 Sobic.003G386300 expressed protein -
12 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
13 Sobic.006G248200 - -
14 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.001G186200 pentatricopeptide, putative, expressed -
16 Sobic.009G238300 expressed protein -
17 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
18 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
19 Sobic.003G324700 expressed protein -
20 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic010G279100 Sobic010G279100 Sobic003G214800 Sobic003G214800 Sobic010G279100--Sobic003G214800 Sobic002G199000 Sobic002G199000 Sobic010G279100--Sobic002G199000 Sobic001G455500 Sobic001G455500 Sobic010G279100--Sobic001G455500 Sobic006G204600 Sobic006G204600 Sobic010G279100--Sobic006G204600 Sobic001G058600 Sobic001G058600 Sobic010G279100--Sobic001G058600 Sobic003G310800 Sobic003G310800 Sobic010G279100--Sobic003G310800 Sobic003G439000 Sobic003G439000 Sobic010G279100--Sobic003G439000 Sobic004G342500 Sobic004G342500 Sobic010G279100--Sobic004G342500 Sobic004G357300 Sobic004G357300 Sobic010G279100--Sobic004G357300 Sobic003G214800--Sobic010G279100 Sobic001G372600 Sobic001G372600 Sobic003G214800--Sobic001G372600 Sobic003G214800--Sobic003G310800 Sobic003G345300 Sobic003G345300 Sobic003G214800--Sobic003G345300 Sobic004G289300 Sobic004G289300 Sobic003G214800--Sobic004G289300 Sobic001G484300 Sobic001G484300 Sobic003G214800--Sobic001G484300 Sobic002G341500 Sobic002G341500 Sobic003G214800--Sobic002G341500 Sobic001G284200 Sobic001G284200 Sobic003G214800--Sobic001G284200 Sobic003G214800--Sobic004G342500 Sobic004G269600 Sobic004G269600 Sobic002G199000--Sobic004G269600 Sobic002G199000--Sobic006G204600 Sobic007G155600 Sobic007G155600 Sobic002G199000--Sobic007G155600 Sobic004G179200 Sobic004G179200 Sobic002G199000--Sobic004G179200 Sobic006G280800 Sobic006G280800 Sobic002G199000--Sobic006G280800 Sobic002G199000--Sobic010G279100 Sobic003G324700 Sobic003G324700 Sobic002G199000--Sobic003G324700 Sobic001G054100 Sobic001G054100 Sobic002G199000--Sobic001G054100 Sobic005G143500 Sobic005G143500 Sobic002G199000--Sobic005G143500 Sobic001G455500--Sobic003G439000 Sobic001G455500--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic001G455500--Sobic002G297400 Sobic001G186200 Sobic001G186200 Sobic001G455500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic001G455500--Sobic001G006000 Sobic001G455500--Sobic004G357300 Sobic001G469900 Sobic001G469900 Sobic001G455500--Sobic001G469900 Sobic006G210400 Sobic006G210400 Sobic001G455500--Sobic006G210400 Sobic001G001300 Sobic001G001300 Sobic001G455500--Sobic001G001300 Sobic006G204600--Sobic002G199000 Sobic002G331100 Sobic002G331100 Sobic006G204600--Sobic002G331100 Sobic006G204600--Sobic010G279100 Sobic006G204600--Sobic004G357300 Sobic010G002000 Sobic010G002000 Sobic006G204600--Sobic010G002000 Sobic006G204600--Sobic004G342500 Sobic006G204600--Sobic001G455500 Sobic006G204600--Sobic001G001300 Sobic006G204600--Sobic001G054100 Sobic008G039600 Sobic008G039600 Sobic001G058600--Sobic008G039600 Sobic006G106400 Sobic006G106400 Sobic001G058600--Sobic006G106400 Sobic001G058600--Sobic005G143500 Sobic001G058600--Sobic004G357300 Sobic009G148500 Sobic009G148500 Sobic001G058600--Sobic009G148500 Sobic001G058600--Sobic010G002000 Sobic003G271900 Sobic003G271900 Sobic001G058600--Sobic003G271900 Sobic001G083100 Sobic001G083100 Sobic001G058600--Sobic001G083100 Sobic004G011300 Sobic004G011300 Sobic001G058600--Sobic004G011300 Sobic003G310800--Sobic010G279100 Sobic003G310800--Sobic003G214800 Sobic003G310800--Sobic001G186200 Sobic003G310800--Sobic001G006000 Sobic003G310800--Sobic001G455500 Sobic002G038300 Sobic002G038300 Sobic003G310800--Sobic002G038300 Sobic010G028000 Sobic010G028000 Sobic003G310800--Sobic010G028000 Sobic003G245800 Sobic003G245800 Sobic003G310800--Sobic003G245800 Sobic001G388400 Sobic001G388400 Sobic003G310800--Sobic001G388400 Sobic003G439000--Sobic001G469900 Sobic001G469933 Sobic001G469933 Sobic003G439000--Sobic001G469933 Sobic001G168800 Sobic001G168800 Sobic003G439000--Sobic001G168800 Sobic003G439000--Sobic004G179200 Sobic001G122400 Sobic001G122400 Sobic003G439000--Sobic001G122400 Sobic009G055800 Sobic009G055800 Sobic003G439000--Sobic009G055800 Sobic001G368500 Sobic001G368500 Sobic003G439000--Sobic001G368500 Sobic003G439000--Sobic002G297400 Sobic003G439000--Sobic001G455500 Sobic004G342500--Sobic006G204600 Sobic004G342500--Sobic010G279100 Sobic004G342500--Sobic002G199000 Sobic001G410700 Sobic001G410700 Sobic004G342500--Sobic001G410700 Sobic004G235100 Sobic004G235100 Sobic004G342500--Sobic004G235100 Sobic004G342500--Sobic003G214800 Sobic004G342500--Sobic001G455500 Sobic006G049200 Sobic006G049200 Sobic004G342500--Sobic006G049200 Sobic006G122500 Sobic006G122500 Sobic004G342500--Sobic006G122500 Sobic004G357300--Sobic009G148500 Sobic004G357300--Sobic006G210400 Sobic004G357300--Sobic002G297400 Sobic004G357300--Sobic010G002000 Sobic004G357300--Sobic001G001300 Sobic004G357300--Sobic001G455500 Sobic005G002900 Sobic005G002900 Sobic004G357300--Sobic005G002900 Sobic004G357300--Sobic001G469933 Sobic003G141100 Sobic003G141100 Sobic004G357300--Sobic003G141100
Octagon: transcription factors


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