Gene annotation
Transcriptome id Sobic.001G058600.1
Synonym Sb01g005330
Functional annotation BT1 family protein, putative, expressed
UniProt C5WX86
Pfam PF07690
Panther DB PTHR31585 PTHR31585:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G32040 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os03g58080.1 : BT1 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008545 , Zm00025a016093
Brachypodium KQK20680 , PNT76942 , PNT76943 , KQK12724
Barley HORVU5Hr1G105030.18 , HORVU5Hr1G105030.19 , HORVU5Hr1G105030.14 , HORVU5Hr1G105030.15 , HORVU5Hr1G105030.16 , HORVU5Hr1G105030.17 , HORVU5Hr1G105030.10 , HORVU5Hr1G105030.11 , HORVU5Hr1G105030.12 , HORVU5Hr1G105030.13 , HORVU5Hr1G105030.6 , HORVU5Hr1G105030.7 , HORVU5Hr1G105030.4 , HORVU5Hr1G105030.5 , HORVU5Hr1G105030.2 , HORVU5Hr1G105030.3 , HORVU5Hr1G105030.1 , HORVU5Hr1G105030.8 , HORVU5Hr1G105030.9 , HORVU5Hr1G105030.21 , HORVU5Hr1G105030.20 , HORVU5Hr1G105030.23 , HORVU5Hr1G105030.22 , HORVU5Hr1G105030.25 , HORVU5Hr1G105030.24 , HORVU5Hr1G105030.27 , HORVU5Hr1G105030.26 , HORVU5Hr1G105030.29 , HORVU5Hr1G105030.28 , HORVU5Hr1G105030.30 , HORVU2Hr1G054930.9 , HORVU2Hr1G054930.8 , HORVU2Hr1G054930.5 , HORVU2Hr1G054930.4 , HORVU2Hr1G054930.7 , HORVU2Hr1G054930.6 , HORVU2Hr1G054930.1 , HORVU2Hr1G054930.3 , HORVU2Hr1G054930.2
Wheat TraesCS2A02G238000 , TraesCS5A02G435600 , TraesCS5A02G435600 , TraesCS2B02G258600 , TraesCS2D02G244100 , TraesCS5D02G443300 , TraesCS5B02G438800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
2 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
3 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
4 Sobic.004G357300 uncharacterized ACR, COG1399 family protein, expressed -
5 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
6 Sobic.010G002000 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed K14164: glycyl-tRNA synthetase
7 Sobic.003G271900 expressed protein -
8 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
9 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
10 Sobic.003G275200 methyltransferase domain containing protein, expressed -
11 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
12 Sobic.003G324700 expressed protein -
13 Sobic.002G199000 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed K00592: [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase
14 Sobic.010G279100 expressed protein -
15 Sobic.002G272100 expressed protein -
16 Sobic.003G334100 zinc finger family protein, putative, expressed -
17 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
18 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
19 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
20 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6


Gene co-expression network
sample Sobic001G058600 Sobic001G058600 Sobic008G039600 Sobic008G039600 Sobic001G058600--Sobic008G039600 Sobic006G106400 Sobic006G106400 Sobic001G058600--Sobic006G106400 Sobic005G143500 Sobic005G143500 Sobic001G058600--Sobic005G143500 Sobic004G357300 Sobic004G357300 Sobic001G058600--Sobic004G357300 Sobic009G148500 Sobic009G148500 Sobic001G058600--Sobic009G148500 Sobic010G002000 Sobic010G002000 Sobic001G058600--Sobic010G002000 Sobic003G271900 Sobic003G271900 Sobic001G058600--Sobic003G271900 Sobic001G083100 Sobic001G083100 Sobic001G058600--Sobic001G083100 Sobic004G011300 Sobic004G011300 Sobic001G058600--Sobic004G011300 Sobic008G039600--Sobic005G143500 Sobic008G039600--Sobic001G083100 Sobic008G039600--Sobic006G106400 Sobic002G401800 Sobic002G401800 Sobic008G039600--Sobic002G401800 Sobic002G272100 Sobic002G272100 Sobic008G039600--Sobic002G272100 Sobic008G039600--Sobic010G002000 Sobic001G368500 Sobic001G368500 Sobic008G039600--Sobic001G368500 Sobic003G094350 Sobic003G094350 Sobic008G039600--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic008G039600--Sobic002G181000 Sobic006G106400--Sobic004G011300 Sobic008G073100 Sobic008G073100 Sobic006G106400--Sobic008G073100 Sobic006G106400--Sobic008G039600 Sobic006G106400--Sobic001G368500 Sobic006G106400--Sobic005G143500 Sobic006G106400--Sobic002G401800 Sobic001G283700 Sobic001G283700 Sobic006G106400--Sobic001G283700 Sobic006G106400--Sobic009G148500 Sobic006G106400--Sobic002G272100 Sobic005G110400 Sobic005G110400 Sobic005G143500--Sobic005G110400 Sobic005G143500--Sobic008G039600 Sobic005G143500--Sobic001G368500 Sobic005G143500--Sobic002G401800 Sobic005G143500--Sobic006G106400 Sobic005G143500--Sobic002G272100 Sobic005G143500--Sobic008G073100 Sobic001G495200 Sobic001G495200 Sobic005G143500--Sobic001G495200 Sobic003G324700 Sobic003G324700 Sobic005G143500--Sobic003G324700 Sobic004G357300--Sobic009G148500 Sobic006G210400 Sobic006G210400 Sobic004G357300--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic004G357300--Sobic002G297400 Sobic004G357300--Sobic010G002000 Sobic001G001300 Sobic001G001300 Sobic004G357300--Sobic001G001300 Sobic001G455500 Sobic001G455500 Sobic004G357300--Sobic001G455500 Sobic005G002900 Sobic005G002900 Sobic004G357300--Sobic005G002900 Sobic001G469933 Sobic001G469933 Sobic004G357300--Sobic001G469933 Sobic003G141100 Sobic003G141100 Sobic004G357300--Sobic003G141100 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic006G055800 Sobic006G055800 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic009G148500--Sobic004G011300 Sobic009G148500--Sobic005G002900 Sobic009G148500--Sobic005G110400 Sobic001G500600 Sobic001G500600 Sobic009G148500--Sobic001G500600 Sobic010G002000--Sobic003G094350 Sobic010G002000--Sobic008G039600 Sobic001G054100 Sobic001G054100 Sobic010G002000--Sobic001G054100 Sobic010G002000--Sobic001G500600 Sobic010G002000--Sobic002G401800 Sobic010G002000--Sobic009G148500 Sobic010G002000--Sobic005G143500 Sobic004G336200 Sobic004G336200 Sobic010G002000--Sobic004G336200 Sobic010G002000--Sobic003G141100 Sobic003G271900--Sobic001G368500 Sobic003G432500 Sobic003G432500 Sobic003G271900--Sobic003G432500 Sobic003G271900--Sobic002G272100 Sobic003G271900--Sobic005G143500 Sobic003G271900--Sobic003G324700 Sobic003G271900--Sobic006G055800 Sobic003G271900--Sobic008G039600 Sobic003G271900--Sobic005G110400 Sobic003G271900--Sobic006G106400 Sobic001G083100--Sobic005G002900 Sobic001G083100--Sobic009G148500 Sobic001G083100--Sobic008G039600 Sobic001G083100--Sobic001G469933 Sobic001G083100--Sobic006G055800 Sobic001G083100--Sobic002G272100 Sobic003G372900 Sobic003G372900 Sobic001G083100--Sobic003G372900 Sobic001G083100--Sobic001G054100 Sobic001G083100--Sobic008G073100 Sobic004G011300--Sobic006G106400 Sobic004G011300--Sobic009G148500 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic004G011300--Sobic008G039600 Sobic004G011300--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic004G011300--Sobic003G301300
Octagon: transcription factors


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