Gene annotation
Transcriptome id Sobic.003G210000.2
Synonym Sb03g027050
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0VYE0
Pfam PF01544
Panther DB PTHR21535 PTHR21535:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G29820 : Magnesium transporter CorA-like family protein
RAP-DB (Rice) LOC_Os01g41720.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G052420.2 , HORVU3Hr1G052420.4 , HORVU3Hr1G052420.5 , HORVU3Hr1G052420.6 , HORVU3Hr1G052420.7 , HORVU3Hr1G052420.1 , HORVU3Hr1G052420.3
Wheat TraesCS3B02G245500 , TraesCS3B02G245500
Populus -


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cDNA sequences
Sobic.003G210000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G380800 cupin domain containing protein, expressed -
2 Sobic.010G142900 oleosin, putative, expressed -
3 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
4 Sobic.001G418500 glyoxalase family protein, putative, expressed -
5 Sobic.002G401400 glyoxalase family protein, putative, expressed -
6 Sobic.001G544400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed -
7 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
8 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
9 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
10 Sobic.003G295600 DUF1264 domain containing protein, putative, expressed -
11 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
12 Sobic.001G126900 oleosin, putative, expressed -
13 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.010G269950 - -
16 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
17 Sobic.008G159000 - -
18 Sobic.006G248100 lipase, putative, expressed -
19 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
20 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G210000 Sobic003G210000 Sobic001G380800 Sobic001G380800 Sobic003G210000--Sobic001G380800 Sobic010G142900 Sobic010G142900 Sobic003G210000--Sobic010G142900 Sobic003G051400 Sobic003G051400 Sobic003G210000--Sobic003G051400 Sobic001G418500 Sobic001G418500 Sobic003G210000--Sobic001G418500 Sobic002G401400 Sobic002G401400 Sobic003G210000--Sobic002G401400 Sobic001G544400 Sobic001G544400 Sobic003G210000--Sobic001G544400 Sobic002G393100 Sobic002G393100 Sobic003G210000--Sobic002G393100 Sobic004G301800 Sobic004G301800 Sobic003G210000--Sobic004G301800 Sobic004G164800 Sobic004G164800 Sobic003G210000--Sobic004G164800 Sobic001G380800--Sobic004G301800 Sobic001G380800--Sobic010G142900 Sobic003G295600 Sobic003G295600 Sobic001G380800--Sobic003G295600 Sobic001G380800--Sobic001G418500 Sobic003G437400 Sobic003G437400 Sobic001G380800--Sobic003G437400 Sobic001G380800--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic001G380800--Sobic001G126900 Sobic001G380800--Sobic002G393100 Sobic003G098800 Sobic003G098800 Sobic001G380800--Sobic003G098800 Sobic010G142900--Sobic001G418500 Sobic010G142900--Sobic001G380800 Sobic010G142900--Sobic003G295600 Sobic010G142900--Sobic004G301800 Sobic010G142900--Sobic001G126900 Sobic010G142900--Sobic002G401400 Sobic003G144500 Sobic003G144500 Sobic010G142900--Sobic003G144500 Sobic003G283700 Sobic003G283700 Sobic010G142900--Sobic003G283700 Sobic010G142900--Sobic001G544400 Sobic003G051400--Sobic003G437400 Sobic010G269950 Sobic010G269950 Sobic003G051400--Sobic010G269950 Sobic010G131500 Sobic010G131500 Sobic003G051400--Sobic010G131500 Sobic003G051400--Sobic001G380800 Sobic006G248100 Sobic006G248100 Sobic003G051400--Sobic006G248100 Sobic003G051400--Sobic002G393100 Sobic001G208500 Sobic001G208500 Sobic003G051400--Sobic001G208500 Sobic003G051400--Sobic003G098800 Sobic001G058800 Sobic001G058800 Sobic003G051400--Sobic001G058800 Sobic001G418500--Sobic010G142900 Sobic001G418500--Sobic002G401400 Sobic001G418500--Sobic001G380800 Sobic001G418500--Sobic004G301800 Sobic001G418500--Sobic001G126900 Sobic001G418500--Sobic003G295600 Sobic001G418500--Sobic003G144500 Sobic001G418500--Sobic001G544400 Sobic003G399500 Sobic003G399500 Sobic001G418500--Sobic003G399500 Sobic002G401400--Sobic001G418500 Sobic002G401400--Sobic003G144500 Sobic002G401400--Sobic001G126900 Sobic002G401400--Sobic010G142900 Sobic002G401400--Sobic001G380800 Sobic009G037100 Sobic009G037100 Sobic002G401400--Sobic009G037100 Sobic002G401400--Sobic004G164800 Sobic003G395000 Sobic003G395000 Sobic002G401400--Sobic003G395000 Sobic002G401400--Sobic002G393100 Sobic001G544400--Sobic010G142900 Sobic001G544400--Sobic001G380800 Sobic001G544400--Sobic004G301800 Sobic001G544400--Sobic003G295600 Sobic001G544400--Sobic001G418500 Sobic001G544400--Sobic003G283700 Sobic001G544400--Sobic002G401400 Sobic001G544400--Sobic003G144500 Sobic001G544400--Sobic001G126900 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G197700 Sobic002G197700 Sobic002G393100--Sobic002G197700 Sobic003G372600 Sobic003G372600 Sobic002G393100--Sobic003G372600 Sobic002G393100--Sobic009G037100 Sobic008G159000 Sobic008G159000 Sobic002G393100--Sobic008G159000 Sobic002G393100--Sobic006G248100 Sobic002G211300 Sobic002G211300 Sobic002G393100--Sobic002G211300 Sobic002G393100--Sobic001G380800 Sobic004G301800--Sobic001G380800 Sobic004G301800--Sobic010G142900 Sobic004G301800--Sobic003G295600 Sobic004G301800--Sobic001G418500 Sobic004G281700 Sobic004G281700 Sobic004G301800--Sobic004G281700 Sobic004G301800--Sobic003G283700 Sobic004G301800--Sobic003G098800 Sobic004G301800--Sobic002G401400 Sobic004G301800--Sobic003G437400 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic010G125000 Sobic010G125000 Sobic004G164800--Sobic010G125000 Sobic004G164800--Sobic006G248100
Octagon: transcription factors


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