Gene annotation
Transcriptome id Sobic.002G393332.1
Synonym -
Functional annotation -
UniProt A0A1W0W7K6
Pfam PF10294
Panther DB PTHR23108 PTHR23108:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26810 : Putative methyltransferase family protein
RAP-DB (Rice) LOC_Os07g44730.1 : expressed protein
MaizeGDB (Corn) Zm00025a048942
Brachypodium KQK14972 , KQK14971
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G480550 - -
2 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
3 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
4 Sobic.006G156801 - K15203: general transcription factor 3C polypeptide 6
5 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
6 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.004G006600 transcription factor jumonji, putative, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
8 Sobic.002G208400 regulator protein, putative, expressed -
9 Sobic.007G042300 expressed protein -
10 Sobic.010G152000 powdery mildew resistant protein 5, putative, expressed -
11 Sobic.003G404000 Plant stearoyl-acyl-carrier-protein desaturase family protein(PubMedID : 26465154)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
12 Sobic.007G194500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
13 Sobic.004G065800 - -
14 Sobic.003G062101 - -
15 Sobic.003G129300 uridine kinase, putative, expressed -
16 Sobic.003G388000 tetratricopeptide repeat domain containing protein, expressed K03350: APC3, anaphase-promoting complex subunit 3
17 Sobic.004G071050 - -
18 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
19 Sobic.003G071901 - -
20 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G393332 Sobic002G393332 Sobic001G480550 Sobic001G480550 Sobic002G393332--Sobic001G480550 Sobic009G113100 Sobic009G113100 Sobic002G393332--Sobic009G113100 Sobic009G132600 Sobic009G132600 Sobic002G393332--Sobic009G132600 Sobic006G156801 Sobic006G156801 Sobic002G393332--Sobic006G156801 Sobic002G142700 Sobic002G142700 Sobic002G393332--Sobic002G142700 Sobic001G004100 Sobic001G004100 Sobic002G393332--Sobic001G004100 Sobic004G006600 Sobic004G006600 Sobic002G393332--Sobic004G006600 Sobic002G208400 Sobic002G208400 Sobic002G393332--Sobic002G208400 Sobic007G042300 Sobic007G042300 Sobic002G393332--Sobic007G042300 Sobic001G480550--Sobic002G393332 Sobic003G214700 Sobic003G214700 Sobic001G480550--Sobic003G214700 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic004G155800 Sobic004G155800 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic009G113100--Sobic001G004100 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic009G113100--Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic010G207400 Sobic010G207400 Sobic009G132600--Sobic010G207400 Sobic007G091200 Sobic007G091200 Sobic009G132600--Sobic007G091200 Sobic009G253800 Sobic009G253800 Sobic009G132600--Sobic009G253800 Sobic001G278700 Sobic001G278700 Sobic009G132600--Sobic001G278700 Sobic010G273800 Sobic010G273800 Sobic009G132600--Sobic010G273800 Sobic001G196700 Sobic001G196700 Sobic009G132600--Sobic001G196700 Sobic009G033500 Sobic009G033500 Sobic009G132600--Sobic009G033500 Sobic003G207600 Sobic003G207600 Sobic009G132600--Sobic003G207600 Sobic009G007500 Sobic009G007500 Sobic009G132600--Sobic009G007500 Sobic002G369701 Sobic002G369701 Sobic006G156801--Sobic002G369701 Sobic006G156801--Sobic002G393332 Sobic009G112300 Sobic009G112300 Sobic006G156801--Sobic009G112300 Sobic005G150600 Sobic005G150600 Sobic006G156801--Sobic005G150600 Sobic006G212900 Sobic006G212900 Sobic006G156801--Sobic006G212900 Sobic006G156801--Sobic001G004100 Sobic010G086600 Sobic010G086600 Sobic006G156801--Sobic010G086600 Sobic008G032900 Sobic008G032900 Sobic006G156801--Sobic008G032900 Sobic006G156801--Sobic001G480550 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G142700--Sobic002G208400 Sobic004G256300 Sobic004G256300 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic003G222700 Sobic003G222700 Sobic002G142700--Sobic003G222700 Sobic001G229300 Sobic001G229300 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic003G360300 Sobic003G360300 Sobic002G142700--Sobic003G360300 Sobic004G031300 Sobic004G031300 Sobic001G004100--Sobic004G031300 Sobic001G004100--Sobic007G187600 Sobic001G004100--Sobic001G013300 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G004100--Sobic001G373000 Sobic001G004100--Sobic002G142700 Sobic001G034500 Sobic001G034500 Sobic001G004100--Sobic001G034500 Sobic010G233000 Sobic010G233000 Sobic004G006600--Sobic010G233000 Sobic002G263200 Sobic002G263200 Sobic004G006600--Sobic002G263200 Sobic010G186600 Sobic010G186600 Sobic004G006600--Sobic010G186600 Sobic001G098400 Sobic001G098400 Sobic004G006600--Sobic001G098400 Sobic004G006600--Sobic001G373000 Sobic003G330900 Sobic003G330900 Sobic004G006600--Sobic003G330900 Sobic006G188500 Sobic006G188500 Sobic004G006600--Sobic006G188500 Sobic004G006600--Sobic009G255600 Sobic004G315500 Sobic004G315500 Sobic004G006600--Sobic004G315500 Sobic002G208400--Sobic002G142700 Sobic001G115500 Sobic001G115500 Sobic002G208400--Sobic001G115500 Sobic002G208400--Sobic009G113100 Sobic006G032600 Sobic006G032600 Sobic002G208400--Sobic006G032600 Sobic003G008600 Sobic003G008600 Sobic002G208400--Sobic003G008600 Sobic004G030400 Sobic004G030400 Sobic002G208400--Sobic004G030400 Sobic003G259600 Sobic003G259600 Sobic002G208400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic002G208400--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic002G208400--Sobic003G129300 Sobic007G042300--Sobic010G015900 Sobic007G042300--Sobic006G061100 Sobic003G159500 Sobic003G159500 Sobic007G042300--Sobic003G159500 Sobic009G239900 Sobic009G239900 Sobic007G042300--Sobic009G239900 Sobic004G075700 Sobic004G075700 Sobic007G042300--Sobic004G075700 Sobic007G042300--Sobic001G480550 Sobic006G179600 Sobic006G179600 Sobic007G042300--Sobic006G179600 Sobic001G423300 Sobic001G423300 Sobic007G042300--Sobic001G423300 Sobic007G042300--Sobic009G113100
Octagon: transcription factors


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