Gene annotation
Transcriptome id Sobic.006G156801.1
Synonym -
Functional annotation -
UniProt A0A1B6PM05
Pfam PF10419
Panther DB PTHR21860
NCBI CDD -
KEGG Orthology K15203; general transcription factor 3C polypeptide 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15420 : Transcription factor TFIIIC, tau55-related protein
RAP-DB (Rice) LOC_Os04g44770.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3B02G513600 , TraesCSU02G084300 , TraesCSU02G084300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G369701 - K06877: DEAD/DEAH box helicase domain-containing protein
2 Sobic.002G393332 - -
3 Sobic.009G112300 kinase, pfkB family, putative, expressed -
4 Sobic.005G150600 expressed protein -
5 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
6 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.010G086600 cyclin-T1-4, putative, expressed K15188: cyclin T
8 Sobic.008G032900 digestive organ expansion factor, putative, expressed K14774: UTP25, U3 small nucleolar RNA-associated protein 25
9 Sobic.001G480550 - -
10 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
11 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.004G184200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PTF1, putative, expressed -
13 Sobic.009G132600 methyl-binding domain protein MBD, putative, expressed -
14 Sobic.003G129300 uridine kinase, putative, expressed -
15 Sobic.004G330000 - K14807: DDX51, ATP-dependent RNA helicase DDX51/DBP6
16 Sobic.003G023200 DNA repair protein Rad51, putative, expressed K10870: RAD51L2, RAD51-like protein 2
17 Sobic.004G020100 division protein, putative, expressed -
18 Sobic.002G395700 DNA repair protein RAD51 homolog 4, putative, expressed K10871: RAD51L3, RAD51-like protein 3
19 Sobic.004G320100 expressed protein -
20 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase


Gene co-expression network
sample Sobic006G156801 Sobic006G156801 Sobic002G369701 Sobic002G369701 Sobic006G156801--Sobic002G369701 Sobic002G393332 Sobic002G393332 Sobic006G156801--Sobic002G393332 Sobic009G112300 Sobic009G112300 Sobic006G156801--Sobic009G112300 Sobic005G150600 Sobic005G150600 Sobic006G156801--Sobic005G150600 Sobic006G212900 Sobic006G212900 Sobic006G156801--Sobic006G212900 Sobic001G004100 Sobic001G004100 Sobic006G156801--Sobic001G004100 Sobic010G086600 Sobic010G086600 Sobic006G156801--Sobic010G086600 Sobic008G032900 Sobic008G032900 Sobic006G156801--Sobic008G032900 Sobic001G480550 Sobic001G480550 Sobic006G156801--Sobic001G480550 Sobic002G369701--Sobic010G086600 Sobic001G542450 Sobic001G542450 Sobic002G369701--Sobic001G542450 Sobic004G330000 Sobic004G330000 Sobic002G369701--Sobic004G330000 Sobic002G369701--Sobic001G004100 Sobic002G398700 Sobic002G398700 Sobic002G369701--Sobic002G398700 Sobic003G222000 Sobic003G222000 Sobic002G369701--Sobic003G222000 Sobic004G031300 Sobic004G031300 Sobic002G369701--Sobic004G031300 Sobic002G369701--Sobic006G212900 Sobic007G042900 Sobic007G042900 Sobic002G369701--Sobic007G042900 Sobic002G393332--Sobic001G480550 Sobic009G113100 Sobic009G113100 Sobic002G393332--Sobic009G113100 Sobic009G132600 Sobic009G132600 Sobic002G393332--Sobic009G132600 Sobic002G393332--Sobic006G156801 Sobic002G142700 Sobic002G142700 Sobic002G393332--Sobic002G142700 Sobic002G393332--Sobic001G004100 Sobic004G006600 Sobic004G006600 Sobic002G393332--Sobic004G006600 Sobic002G208400 Sobic002G208400 Sobic002G393332--Sobic002G208400 Sobic007G042300 Sobic007G042300 Sobic002G393332--Sobic007G042300 Sobic002G220200 Sobic002G220200 Sobic009G112300--Sobic002G220200 Sobic002G199400 Sobic002G199400 Sobic009G112300--Sobic002G199400 Sobic009G112300--Sobic005G150600 Sobic004G030400 Sobic004G030400 Sobic009G112300--Sobic004G030400 Sobic009G112300--Sobic009G113100 Sobic002G343200 Sobic002G343200 Sobic009G112300--Sobic002G343200 Sobic006G141600 Sobic006G141600 Sobic009G112300--Sobic006G141600 Sobic006G282200 Sobic006G282200 Sobic009G112300--Sobic006G282200 Sobic002G076500 Sobic002G076500 Sobic009G112300--Sobic002G076500 Sobic004G172500 Sobic004G172500 Sobic005G150600--Sobic004G172500 Sobic010G244900 Sobic010G244900 Sobic005G150600--Sobic010G244900 Sobic005G150600--Sobic002G076500 Sobic005G150600--Sobic006G141600 Sobic007G153500 Sobic007G153500 Sobic005G150600--Sobic007G153500 Sobic002G292900 Sobic002G292900 Sobic005G150600--Sobic002G292900 Sobic004G213800 Sobic004G213800 Sobic005G150600--Sobic004G213800 Sobic005G150600--Sobic004G030400 Sobic005G150600--Sobic009G112300 Sobic003G023200 Sobic003G023200 Sobic006G212900--Sobic003G023200 Sobic004G247100 Sobic004G247100 Sobic006G212900--Sobic004G247100 Sobic003G193500 Sobic003G193500 Sobic006G212900--Sobic003G193500 Sobic009G195700 Sobic009G195700 Sobic006G212900--Sobic009G195700 Sobic004G256300 Sobic004G256300 Sobic006G212900--Sobic004G256300 Sobic003G129300 Sobic003G129300 Sobic006G212900--Sobic003G129300 Sobic008G116600 Sobic008G116600 Sobic006G212900--Sobic008G116600 Sobic003G222700 Sobic003G222700 Sobic006G212900--Sobic003G222700 Sobic001G467100 Sobic001G467100 Sobic006G212900--Sobic001G467100 Sobic001G004100--Sobic004G031300 Sobic007G187600 Sobic007G187600 Sobic001G004100--Sobic007G187600 Sobic001G013300 Sobic001G013300 Sobic001G004100--Sobic001G013300 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G373000 Sobic001G373000 Sobic001G004100--Sobic001G373000 Sobic001G004100--Sobic002G142700 Sobic001G034500 Sobic001G034500 Sobic001G004100--Sobic001G034500 Sobic010G086600--Sobic007G042900 Sobic002G193300 Sobic002G193300 Sobic010G086600--Sobic002G193300 Sobic010G086600--Sobic001G542450 Sobic008G002300 Sobic008G002300 Sobic010G086600--Sobic008G002300 Sobic010G086600--Sobic002G292900 Sobic010G089400 Sobic010G089400 Sobic010G086600--Sobic010G089400 Sobic002G371300 Sobic002G371300 Sobic010G086600--Sobic002G371300 Sobic006G088200 Sobic006G088200 Sobic010G086600--Sobic006G088200 Sobic007G180600 Sobic007G180600 Sobic010G086600--Sobic007G180600 Sobic003G308500 Sobic003G308500 Sobic008G032900--Sobic003G308500 Sobic004G322300 Sobic004G322300 Sobic008G032900--Sobic004G322300 Sobic006G002800 Sobic006G002800 Sobic008G032900--Sobic006G002800 Sobic006G125500 Sobic006G125500 Sobic008G032900--Sobic006G125500 Sobic002G171300 Sobic002G171300 Sobic008G032900--Sobic002G171300 Sobic001G288700 Sobic001G288700 Sobic008G032900--Sobic001G288700 Sobic006G093300 Sobic006G093300 Sobic008G032900--Sobic006G093300 Sobic009G016400 Sobic009G016400 Sobic008G032900--Sobic009G016400 Sobic001G461300 Sobic001G461300 Sobic008G032900--Sobic001G461300 Sobic001G480550--Sobic002G393332 Sobic003G214700 Sobic003G214700 Sobic001G480550--Sobic003G214700 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic004G155800 Sobic004G155800 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700
Octagon: transcription factors


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