Gene annotation
Transcriptome id Sobic.004G155800.2
Synonym Sb04g020680, AHAS, ALS, CSR1, IMR1, TZP5
Functional annotation thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed
UniProt H0I4B8 , A0A292QBG6 , A0A1Z5RMP2
Pfam PF00205 PF02775 PF02776
Panther DB PTHR18968 PTHR18968:SF112
NCBI CDD -
KEGG Orthology K01652; E2.2.1.6L, ilvB, ilvG, acetolactate synthase I/II/III large subunit
Gene Ontology GO:0000287; magnesium ion binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G48560 : chlorsulfuron/imidazolinone resistant 1
RAP-DB (Rice) LOC_Os02g30630.2 : thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020404 , Zm00025a031354
Brachypodium KQJ82285 , KQJ99590
Barley HORVU6Hr1G072320.4 , HORVU6Hr1G072320.1 , HORVU6Hr1G072320.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
2 Sobic.001G480550 - -
3 Sobic.005G072400 expressed protein -
4 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
5 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
6 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
7 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
8 Sobic.010G270800 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.009G257500 expressed protein -
10 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
11 Sobic.007G078300 serine/threonine-protein kinase HT1, putative, expressed -
12 Sobic.009G239900 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed K00053: ketol-acid reductoisomerase
13 Sobic.006G232400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aluminum resistance protein, putative, expressed -
14 Sobic.010G189100 expressed protein -
15 Sobic.001G011300 expressed protein -
16 Sobic.010G207400 protein kinase domain containing protein, expressed -
17 Sobic.004G070800 tic21, putative, expressed -
18 Sobic.008G162100 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
19 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
20 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1


Gene co-expression network
sample Sobic004G155800 Sobic004G155800 Sobic001G423300 Sobic001G423300 Sobic004G155800--Sobic001G423300 Sobic001G480550 Sobic001G480550 Sobic004G155800--Sobic001G480550 Sobic005G072400 Sobic005G072400 Sobic004G155800--Sobic005G072400 Sobic001G130700 Sobic001G130700 Sobic004G155800--Sobic001G130700 Sobic005G187400 Sobic005G187400 Sobic004G155800--Sobic005G187400 Sobic005G046900 Sobic005G046900 Sobic004G155800--Sobic005G046900 Sobic003G022200 Sobic003G022200 Sobic004G155800--Sobic003G022200 Sobic010G270800 Sobic010G270800 Sobic004G155800--Sobic010G270800 Sobic009G257500 Sobic009G257500 Sobic004G155800--Sobic009G257500 Sobic001G423300--Sobic005G187400 Sobic009G113100 Sobic009G113100 Sobic001G423300--Sobic009G113100 Sobic001G462401 Sobic001G462401 Sobic001G423300--Sobic001G462401 Sobic009G254000 Sobic009G254000 Sobic001G423300--Sobic009G254000 Sobic010G207400 Sobic010G207400 Sobic001G423300--Sobic010G207400 Sobic001G423300--Sobic004G155800 Sobic008G179800 Sobic008G179800 Sobic001G423300--Sobic008G179800 Sobic006G061100 Sobic006G061100 Sobic001G423300--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic001G423300--Sobic004G075700 Sobic002G393332 Sobic002G393332 Sobic001G480550--Sobic002G393332 Sobic003G214700 Sobic003G214700 Sobic001G480550--Sobic003G214700 Sobic001G480550--Sobic009G113100 Sobic010G015900 Sobic010G015900 Sobic001G480550--Sobic010G015900 Sobic001G480550--Sobic004G155800 Sobic004G065800 Sobic004G065800 Sobic001G480550--Sobic004G065800 Sobic007G042300 Sobic007G042300 Sobic001G480550--Sobic007G042300 Sobic010G021200 Sobic010G021200 Sobic001G480550--Sobic010G021200 Sobic001G367700 Sobic001G367700 Sobic001G480550--Sobic001G367700 Sobic006G278200 Sobic006G278200 Sobic005G072400--Sobic006G278200 Sobic002G253600 Sobic002G253600 Sobic005G072400--Sobic002G253600 Sobic005G198200 Sobic005G198200 Sobic005G072400--Sobic005G198200 Sobic003G343600 Sobic003G343600 Sobic005G072400--Sobic003G343600 Sobic009G137900 Sobic009G137900 Sobic005G072400--Sobic009G137900 Sobic001G230500 Sobic001G230500 Sobic005G072400--Sobic001G230500 Sobic003G415100 Sobic003G415100 Sobic005G072400--Sobic003G415100 Sobic002G159200 Sobic002G159200 Sobic005G072400--Sobic002G159200 Sobic006G261100 Sobic006G261100 Sobic005G072400--Sobic006G261100 Sobic001G130700--Sobic003G022200 Sobic001G130700--Sobic009G257500 Sobic008G156200 Sobic008G156200 Sobic001G130700--Sobic008G156200 Sobic001G130700--Sobic002G253600 Sobic007G209000 Sobic007G209000 Sobic001G130700--Sobic007G209000 Sobic001G130700--Sobic005G072400 Sobic001G384600 Sobic001G384600 Sobic001G130700--Sobic001G384600 Sobic006G203200 Sobic006G203200 Sobic001G130700--Sobic006G203200 Sobic006G037300 Sobic006G037300 Sobic001G130700--Sobic006G037300 Sobic005G187400--Sobic001G423300 Sobic005G187400--Sobic009G113100 Sobic001G373000 Sobic001G373000 Sobic005G187400--Sobic001G373000 Sobic002G005000 Sobic002G005000 Sobic005G187400--Sobic002G005000 Sobic005G187400--Sobic001G230500 Sobic004G067400 Sobic004G067400 Sobic005G187400--Sobic004G067400 Sobic003G161800 Sobic003G161800 Sobic005G187400--Sobic003G161800 Sobic001G334100 Sobic001G334100 Sobic005G187400--Sobic001G334100 Sobic001G115500 Sobic001G115500 Sobic005G187400--Sobic001G115500 Sobic006G276000 Sobic006G276000 Sobic005G046900--Sobic006G276000 Sobic007G041300 Sobic007G041300 Sobic005G046900--Sobic007G041300 Sobic005G079800 Sobic005G079800 Sobic005G046900--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic006G120800 Sobic006G120800 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G191700 Sobic005G191700 Sobic005G046900--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic005G046900--Sobic003G409200 Sobic010G189100 Sobic010G189100 Sobic003G022200--Sobic010G189100 Sobic003G022200--Sobic001G130700 Sobic007G078300 Sobic007G078300 Sobic003G022200--Sobic007G078300 Sobic003G035500 Sobic003G035500 Sobic003G022200--Sobic003G035500 Sobic001G041400 Sobic001G041400 Sobic003G022200--Sobic001G041400 Sobic003G022200--Sobic002G253600 Sobic002G016900 Sobic002G016900 Sobic003G022200--Sobic002G016900 Sobic003G022200--Sobic006G278200 Sobic001G033400 Sobic001G033400 Sobic003G022200--Sobic001G033400 Sobic010G270800--Sobic002G016900 Sobic002G059866 Sobic002G059866 Sobic010G270800--Sobic002G059866 Sobic010G270800--Sobic003G022200 Sobic010G270800--Sobic007G078300 Sobic010G270800--Sobic007G209000 Sobic010G270800--Sobic002G253600 Sobic010G270800--Sobic001G130700 Sobic009G090100 Sobic009G090100 Sobic010G270800--Sobic009G090100 Sobic004G038900 Sobic004G038900 Sobic010G270800--Sobic004G038900 Sobic006G126600 Sobic006G126600 Sobic009G257500--Sobic006G126600 Sobic009G032200 Sobic009G032200 Sobic009G257500--Sobic009G032200 Sobic008G045800 Sobic008G045800 Sobic009G257500--Sobic008G045800 Sobic009G257500--Sobic003G415100 Sobic008G056200 Sobic008G056200 Sobic009G257500--Sobic008G056200 Sobic009G257500--Sobic010G189100 Sobic010G236200 Sobic010G236200 Sobic009G257500--Sobic010G236200 Sobic009G257500--Sobic008G156200 Sobic010G262900 Sobic010G262900 Sobic009G257500--Sobic010G262900
Octagon: transcription factors


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