Gene annotation
Transcriptome id Sobic.006G232400.1
Synonym Sb06g030015
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
aluminum resistance protein, putative, expressed
UniProt A0A1B6PNI2
Pfam PF06838
Panther DB PTHR11808 PTHR11808:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g54380.1 : aluminum resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a009621 , Zm00025a017755 , Zm00025a028187 , Zm00025a014335 , Zm00025a034014
Brachypodium KQJ84846 , KQJ84847 , KQJ84848 , KQJ84849 , PNT61944 , PNT61945
Barley HORVU2Hr1G024270.1 , HORVU2Hr1G024270.2
Wheat TraesCS2A02G527200 , TraesCS5B02G055700 , TraesCS5B02G055700 , TraesCS2D02G530100 , TraesCS2B02G557800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G441200 translocase of chloroplast 34, putative, expressed -
2 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
3 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
4 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.002G272400 expressed protein -
6 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
7 Sobic.004G070800 tic21, putative, expressed -
8 Sobic.004G214400 tic20, putative, expressed -
9 Sobic.002G140000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
11 Sobic.006G281066 - -
12 Sobic.002G354700 zinc finger family protein, putative, expressed -
13 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
14 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
15 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
16 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
17 Sobic.009G210900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
19 Sobic.004G155800 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01652: E2.2.1.6L, ilvB, ilvG, acetolactate synthase I/II/III large subunit
20 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -


Gene co-expression network
sample Sobic006G232400 Sobic006G232400 Sobic001G441200 Sobic001G441200 Sobic006G232400--Sobic001G441200 Sobic001G423300 Sobic001G423300 Sobic006G232400--Sobic001G423300 Sobic003G333700 Sobic003G333700 Sobic006G232400--Sobic003G333700 Sobic003G223000 Sobic003G223000 Sobic006G232400--Sobic003G223000 Sobic002G272400 Sobic002G272400 Sobic006G232400--Sobic002G272400 Sobic001G104300 Sobic001G104300 Sobic006G232400--Sobic001G104300 Sobic004G070800 Sobic004G070800 Sobic006G232400--Sobic004G070800 Sobic004G214400 Sobic004G214400 Sobic006G232400--Sobic004G214400 Sobic002G140000 Sobic002G140000 Sobic006G232400--Sobic002G140000 Sobic001G441200--Sobic006G232400 Sobic003G165800 Sobic003G165800 Sobic001G441200--Sobic003G165800 Sobic006G281066 Sobic006G281066 Sobic001G441200--Sobic006G281066 Sobic007G026200 Sobic007G026200 Sobic001G441200--Sobic007G026200 Sobic001G441200--Sobic004G214400 Sobic002G189600 Sobic002G189600 Sobic001G441200--Sobic002G189600 Sobic002G141900 Sobic002G141900 Sobic001G441200--Sobic002G141900 Sobic001G441200--Sobic004G070800 Sobic001G441200--Sobic002G140000 Sobic005G187400 Sobic005G187400 Sobic001G423300--Sobic005G187400 Sobic009G113100 Sobic009G113100 Sobic001G423300--Sobic009G113100 Sobic001G462401 Sobic001G462401 Sobic001G423300--Sobic001G462401 Sobic009G254000 Sobic009G254000 Sobic001G423300--Sobic009G254000 Sobic010G207400 Sobic010G207400 Sobic001G423300--Sobic010G207400 Sobic004G155800 Sobic004G155800 Sobic001G423300--Sobic004G155800 Sobic008G179800 Sobic008G179800 Sobic001G423300--Sobic008G179800 Sobic006G061100 Sobic006G061100 Sobic001G423300--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic001G423300--Sobic004G075700 Sobic002G078000 Sobic002G078000 Sobic003G333700--Sobic002G078000 Sobic003G333700--Sobic003G223000 Sobic001G013900 Sobic001G013900 Sobic003G333700--Sobic001G013900 Sobic003G333700--Sobic001G104300 Sobic004G109000 Sobic004G109000 Sobic003G333700--Sobic004G109000 Sobic001G164500 Sobic001G164500 Sobic003G333700--Sobic001G164500 Sobic001G165801 Sobic001G165801 Sobic003G333700--Sobic001G165801 Sobic001G188600 Sobic001G188600 Sobic003G333700--Sobic001G188600 Sobic001G379100 Sobic001G379100 Sobic003G333700--Sobic001G379100 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic003G223000--Sobic001G165801 Sobic003G223000--Sobic001G104300 Sobic003G223000--Sobic002G272400 Sobic002G272400--Sobic002G141900 Sobic002G272400--Sobic001G013900 Sobic002G272400--Sobic008G101900 Sobic002G272400--Sobic003G223000 Sobic008G058000 Sobic008G058000 Sobic002G272400--Sobic008G058000 Sobic001G371700 Sobic001G371700 Sobic002G272400--Sobic001G371700 Sobic004G119400 Sobic004G119400 Sobic002G272400--Sobic004G119400 Sobic001G315400 Sobic001G315400 Sobic002G272400--Sobic001G315400 Sobic010G157700 Sobic010G157700 Sobic002G272400--Sobic010G157700 Sobic001G104300--Sobic002G078000 Sobic001G104300--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic001G104300--Sobic005G022000 Sobic001G104300--Sobic003G165800 Sobic001G104300--Sobic004G070800 Sobic001G104300--Sobic001G013900 Sobic001G104300--Sobic003G333700 Sobic010G134500 Sobic010G134500 Sobic001G104300--Sobic010G134500 Sobic001G104300--Sobic004G109000 Sobic003G383500 Sobic003G383500 Sobic004G070800--Sobic003G383500 Sobic007G013400 Sobic007G013400 Sobic004G070800--Sobic007G013400 Sobic004G070800--Sobic004G109000 Sobic004G015700 Sobic004G015700 Sobic004G070800--Sobic004G015700 Sobic001G357200 Sobic001G357200 Sobic004G070800--Sobic001G357200 Sobic003G261200 Sobic003G261200 Sobic004G070800--Sobic003G261200 Sobic004G070800--Sobic001G104300 Sobic007G211100 Sobic007G211100 Sobic004G070800--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G070800--Sobic006G114300 Sobic001G375000 Sobic001G375000 Sobic004G214400--Sobic001G375000 Sobic004G263200 Sobic004G263200 Sobic004G214400--Sobic004G263200 Sobic004G214400--Sobic006G281066 Sobic007G101300 Sobic007G101300 Sobic004G214400--Sobic007G101300 Sobic006G088000 Sobic006G088000 Sobic004G214400--Sobic006G088000 Sobic001G433100 Sobic001G433100 Sobic004G214400--Sobic001G433100 Sobic010G027200 Sobic010G027200 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G003900 Sobic004G003900 Sobic004G214400--Sobic004G003900 Sobic002G140000--Sobic010G027200 Sobic007G116100 Sobic007G116100 Sobic002G140000--Sobic007G116100 Sobic007G015300 Sobic007G015300 Sobic002G140000--Sobic007G015300 Sobic005G022800 Sobic005G022800 Sobic002G140000--Sobic005G022800 Sobic002G140000--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic002G140000--Sobic006G263800 Sobic001G099000 Sobic001G099000 Sobic002G140000--Sobic001G099000 Sobic002G140000--Sobic001G375000 Sobic001G321400 Sobic001G321400 Sobic002G140000--Sobic001G321400
Octagon: transcription factors


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