Gene annotation
Transcriptome id Sobic.003G333700.1
Synonym CS26, Sb03g037860
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cysteine synthase, chloroplast precursor, putative, expressed
UniProt C5XN68
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF90
NCBI CDD KOG1252; Cystathionine beta-synthase and related enzymes
KEGG Orthology K01738; cysteine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03630 : cysteine synthase 26
RAP-DB (Rice) LOC_Os01g59920.1 : cysteine synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027110
Brachypodium KQK10293
Barley HORVU3Hr1G079890.1
Wheat TraesCS3B02G370200 , TraesCS3B02G370200 , TraesCS3B02G370200 , TraesCS3A02G338600 , TraesCS3A02G338600 , TraesCS3A02G338600 , TraesCS3D02G332100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
2 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G013900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
4 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
5 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
6 Sobic.001G164500 MYB family transcription factor, putative, expressed -
7 Sobic.001G165801 - -
8 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
9 Sobic.001G379100 basic helix-loop-helix domain containing protein, expressed -
10 Sobic.009G002900 expressed protein -
11 Sobic.003G259500 - -
12 Sobic.006G114300 pentatricopeptide, putative, expressed -
13 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
15 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
16 Sobic.003G250000 peroxidase family protein, expressed K00430: peroxidase
17 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
18 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
19 Sobic.006G232400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aluminum resistance protein, putative, expressed -
20 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -


Gene co-expression network
sample Sobic003G333700 Sobic003G333700 Sobic002G078000 Sobic002G078000 Sobic003G333700--Sobic002G078000 Sobic003G223000 Sobic003G223000 Sobic003G333700--Sobic003G223000 Sobic001G013900 Sobic001G013900 Sobic003G333700--Sobic001G013900 Sobic001G104300 Sobic001G104300 Sobic003G333700--Sobic001G104300 Sobic004G109000 Sobic004G109000 Sobic003G333700--Sobic004G109000 Sobic001G164500 Sobic001G164500 Sobic003G333700--Sobic001G164500 Sobic001G165801 Sobic001G165801 Sobic003G333700--Sobic001G165801 Sobic001G188600 Sobic001G188600 Sobic003G333700--Sobic001G188600 Sobic001G379100 Sobic001G379100 Sobic003G333700--Sobic001G379100 Sobic002G078000--Sobic001G013900 Sobic002G078000--Sobic003G333700 Sobic002G078000--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic002G078000--Sobic005G022000 Sobic002G078000--Sobic003G223000 Sobic002G360200 Sobic002G360200 Sobic002G078000--Sobic002G360200 Sobic002G078000--Sobic001G188600 Sobic010G012900 Sobic010G012900 Sobic002G078000--Sobic010G012900 Sobic002G078000--Sobic004G109000 Sobic003G223000--Sobic003G333700 Sobic003G223000--Sobic002G078000 Sobic008G101900 Sobic008G101900 Sobic003G223000--Sobic008G101900 Sobic009G002900 Sobic009G002900 Sobic003G223000--Sobic009G002900 Sobic009G177200 Sobic009G177200 Sobic003G223000--Sobic009G177200 Sobic009G231100 Sobic009G231100 Sobic003G223000--Sobic009G231100 Sobic003G223000--Sobic001G165801 Sobic003G223000--Sobic001G104300 Sobic002G272400 Sobic002G272400 Sobic003G223000--Sobic002G272400 Sobic001G013900--Sobic002G360200 Sobic001G013900--Sobic002G078000 Sobic001G013900--Sobic003G333700 Sobic001G013900--Sobic002G272400 Sobic001G013900--Sobic001G104300 Sobic001G013900--Sobic001G188600 Sobic001G172300 Sobic001G172300 Sobic001G013900--Sobic001G172300 Sobic004G338300 Sobic004G338300 Sobic001G013900--Sobic004G338300 Sobic008G058000 Sobic008G058000 Sobic001G013900--Sobic008G058000 Sobic001G104300--Sobic002G078000 Sobic006G281066 Sobic006G281066 Sobic001G104300--Sobic006G281066 Sobic001G104300--Sobic005G022000 Sobic003G165800 Sobic003G165800 Sobic001G104300--Sobic003G165800 Sobic004G070800 Sobic004G070800 Sobic001G104300--Sobic004G070800 Sobic001G104300--Sobic001G013900 Sobic001G104300--Sobic003G333700 Sobic010G134500 Sobic010G134500 Sobic001G104300--Sobic010G134500 Sobic001G104300--Sobic004G109000 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic006G114300 Sobic006G114300 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic009G059100 Sobic009G059100 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic006G025700 Sobic006G025700 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300 Sobic001G164500--Sobic001G379100 Sobic006G233600 Sobic006G233600 Sobic001G164500--Sobic006G233600 Sobic010G096200 Sobic010G096200 Sobic001G164500--Sobic010G096200 Sobic002G280500 Sobic002G280500 Sobic001G164500--Sobic002G280500 Sobic003G148400 Sobic003G148400 Sobic001G164500--Sobic003G148400 Sobic001G164500--Sobic004G109000 Sobic001G478100 Sobic001G478100 Sobic001G164500--Sobic001G478100 Sobic001G164500--Sobic003G333700 Sobic006G238100 Sobic006G238100 Sobic001G164500--Sobic006G238100 Sobic001G165801--Sobic003G223000 Sobic003G311600 Sobic003G311600 Sobic001G165801--Sobic003G311600 Sobic001G165801--Sobic003G333700 Sobic001G165801--Sobic001G013900 Sobic003G336500 Sobic003G336500 Sobic001G165801--Sobic003G336500 Sobic007G225700 Sobic007G225700 Sobic001G165801--Sobic007G225700 Sobic007G070000 Sobic007G070000 Sobic001G165801--Sobic007G070000 Sobic001G290600 Sobic001G290600 Sobic001G165801--Sobic001G290600 Sobic008G100400 Sobic008G100400 Sobic001G165801--Sobic008G100400 Sobic001G188600--Sobic001G069500 Sobic001G188600--Sobic006G114300 Sobic001G357200 Sobic001G357200 Sobic001G188600--Sobic001G357200 Sobic009G098100 Sobic009G098100 Sobic001G188600--Sobic009G098100 Sobic001G188600--Sobic010G012900 Sobic001G188600--Sobic004G109000 Sobic001G188600--Sobic007G211100 Sobic004G253800 Sobic004G253800 Sobic001G188600--Sobic004G253800 Sobic008G030000 Sobic008G030000 Sobic001G188600--Sobic008G030000 Sobic001G379100--Sobic001G164500 Sobic001G379100--Sobic010G096200 Sobic001G379100--Sobic003G148400 Sobic001G379100--Sobic002G280500 Sobic001G127700 Sobic001G127700 Sobic001G379100--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G379100--Sobic006G172700 Sobic002G225000 Sobic002G225000 Sobic001G379100--Sobic002G225000 Sobic004G060700 Sobic004G060700 Sobic001G379100--Sobic004G060700 Sobic001G379100--Sobic004G109000
Octagon: transcription factors


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